RNA–Protein interactions for RNA: ENST00000569136.5

CAPN3-219, Transcript of calpain 3, humanhuman

TSL 2 BASIC

Gene CAPN3, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-219ENST00000569136 SPATA31A7Q8IWB4 1347 aa12.68□□□□□ -0.38
CAPN3-219ENST00000569136 SEPT12Q8IYM1 358 aa12.68□□□□□ -0.38
CAPN3-219ENST00000569136 COG3Q96JB2 828 aa12.68□□□□□ -0.38
CAPN3-219ENST00000569136 STRN4Q9NRL3 753 aa12.68□□□□□ -0.38
CAPN3-219ENST00000569136 ANKRD36BQ8N2N9 1353 aa12.68□□□□□ -0.38
CAPN3-219ENST00000569136 TSR1Q2NL82 804 aaKnown RBP12.67□□□□□ -0.38
CAPN3-219ENST00000569136 CCDC125Q86Z20 511 aa12.67□□□□□ -0.38
CAPN3-219ENST00000569136 THRAP3Q9Y2W1 955 aaKnown RBP12.67□□□□□ -0.38
CAPN3-219ENST00000569136 A0A1W2PP64 1363 aa12.67□□□□□ -0.38
CAPN3-219ENST00000569136 ITSN1Q15811 1721 aa12.66□□□□□ -0.38
CAPN3-219ENST00000569136 ZBTB7CA1YPR0 619 aa12.66□□□□□ -0.38
CAPN3-219ENST00000569136 FYB1O15117 783 aa12.66□□□□□ -0.38
CAPN3-219ENST00000569136 BARGINQ6ZT62 677 aa12.66□□□□□ -0.38
CAPN3-219ENST00000569136 TCP11L2Q8N4U5 519 aa12.66□□□□□ -0.38
CAPN3-219ENST00000569136 SPATA31A1Q5TZJ5 1347 aa12.65□□□□□ -0.38
CAPN3-219ENST00000569136 FAM98CQ17RN3 349 aaKnown RBP12.65□□□□□ -0.38
CAPN3-219ENST00000569136 C6orf132Q5T0Z8 1188 aa12.65□□□□□ -0.38
CAPN3-219ENST00000569136 TRPM3Q9HCF6 1732 aaPredicted RBP12.65□□□□□ -0.38
CAPN3-219ENST00000569136 PTPREP23469 700 aa12.64□□□□□ -0.39
CAPN3-219ENST00000569136 LARP1Q6PKG0 1096 aaKnown RBP12.64□□□□□ -0.39
CAPN3-219ENST00000569136 KRT27Q7Z3Y8 459 aa12.64□□□□□ -0.39
CAPN3-219ENST00000569136 KCNK17Q96T54 332 aa12.64□□□□□ -0.39
CAPN3-219ENST00000569136 POLR3GLQ9BT43 218 aa12.64□□□□□ -0.39
CAPN3-219ENST00000569136 CARD14Q9BXL6 1004 aa12.64□□□□□ -0.39
CAPN3-219ENST00000569136 CDHR5Q9HBB8 845 aa12.64□□□□□ -0.39
CAPN3-219ENST00000569136 CD163L1Q9NR16 1453 aa12.64□□□□□ -0.39
CAPN3-219ENST00000569136 A0A0G2JS52 829 aa12.63□□□□□ -0.39
CAPN3-219ENST00000569136 MYT1Q01538 1121 aa12.63□□□□□ -0.39
CAPN3-219ENST00000569136 TPRNQ4KMQ1 711 aa12.63□□□□□ -0.39
CAPN3-219ENST00000569136 CDCA7Q9BWT1 371 aaPredicted RBP12.63□□□□□ -0.39
CAPN3-219ENST00000569136 BCL2L12Q9HB09 334 aa12.63□□□□□ -0.39
CAPN3-219ENST00000569136 AXIN2Q9Y2T1 843 aa12.63□□□□□ -0.39
CAPN3-219ENST00000569136 TOPAZ1Q8N9V7 1692 aa12.63□□□□□ -0.39
CAPN3-219ENST00000569136 ALS2Q96Q42 1657 aa12.63□□□□□ -0.39
CAPN3-219ENST00000569136 CGNL1Q0VF96 1302 aa12.62□□□□□ -0.39
CAPN3-219ENST00000569136 C11orf95C9JLR9 678 aaPredicted RBP12.62□□□□□ -0.39
CAPN3-219ENST00000569136 CSB-PGBD3P0DP91 1061 aa12.62□□□□□ -0.39
CAPN3-219ENST00000569136 TOM1L2Q6ZVM7 507 aa12.62□□□□□ -0.39
CAPN3-219ENST00000569136 IP6K1Q92551 441 aa12.62□□□□□ -0.39
CAPN3-219ENST00000569136 USP35Q9P2H5 1018 aa12.62□□□□□ -0.39
CAPN3-219ENST00000569136 RGS12O14924 1447 aa12.62□□□□□ -0.39
CAPN3-219ENST00000569136 PDE3BQ13370 1112 aa12.61□□□□□ -0.39
CAPN3-219ENST00000569136 CARD10Q9BWT7 1032 aa12.61□□□□□ -0.39
CAPN3-219ENST00000569136 PANK3Q9H999 370 aa12.61□□□□□ -0.39
CAPN3-219ENST00000569136 WDR17Q8IZU2 1322 aa12.61□□□□□ -0.39
CAPN3-219ENST00000569136 POTEB3A0JP26 581 aa12.6□□□□□ -0.39
CAPN3-219ENST00000569136 FCHSD2O94868 740 aa12.6□□□□□ -0.39
CAPN3-219ENST00000569136 AMPHP49418 695 aa12.6□□□□□ -0.39
CAPN3-219ENST00000569136 POTEBQ6S5H4 581 aa12.6□□□□□ -0.39
CAPN3-219ENST00000569136 ZNF687Q8N1G0 1237 aa12.6□□□□□ -0.39
CAPN3-219ENST00000569136 GGNBP2Q9H3C7 697 aa12.6□□□□□ -0.39
CAPN3-219ENST00000569136 FAM196AQ6ZSG2 479 aa12.59□□□□□ -0.39
CAPN3-219ENST00000569136 KNSTRNQ9Y448 316 aa12.59□□□□□ -0.39
CAPN3-219ENST00000569136 PSEN2P49810 448 aa12.58□□□□□ -0.4
CAPN3-219ENST00000569136 SF3B2Q13435 895 aaKnown RBP12.58□□□□□ -0.4
CAPN3-219ENST00000569136 POTEGQ6S5H5 508 aa12.58□□□□□ -0.4
CAPN3-219ENST00000569136 ZC3H15Q8WU90 426 aaKnown RBP12.58□□□□□ -0.4
CAPN3-219ENST00000569136 SLIT3O75094 1523 aa12.57□□□□□ -0.4
CAPN3-219ENST00000569136 COL14A1Q05707 1796 aaKnown RBP12.57□□□□□ -0.4
CAPN3-219ENST00000569136 POTEMA6NI47 508 aa12.57□□□□□ -0.4
CAPN3-219ENST00000569136 ARHGAP33O14559 1287 aa12.57□□□□□ -0.4
CAPN3-219ENST00000569136 NLRP2Q9NX02 1062 aa12.57□□□□□ -0.4
CAPN3-219ENST00000569136 CAMTA1Q9Y6Y1 1673 aa12.57□□□□□ -0.4
CAPN3-219ENST00000569136 CRB1P82279 1406 aa12.56□□□□□ -0.4
CAPN3-219ENST00000569136 EXOC5O00471 708 aa12.56□□□□□ -0.4
CAPN3-219ENST00000569136 ANKRD24Q8TF21 1146 aa12.56□□□□□ -0.4
CAPN3-219ENST00000569136 MAP3K19Q56UN5 1328 aa12.56□□□□□ -0.4
CAPN3-219ENST00000569136 COL9A1P20849 921 aa12.55□□□□□ -0.4
CAPN3-219ENST00000569136 HOXC9P31274 260 aa12.55□□□□□ -0.4
CAPN3-219ENST00000569136 PTGDRQ13258 359 aa12.55□□□□□ -0.4
CAPN3-219ENST00000569136 DDB1Q16531 1140 aa12.55□□□□□ -0.4
CAPN3-219ENST00000569136 KIF7Q2M1P5 1343 aa12.55□□□□□ -0.4
CAPN3-219ENST00000569136 OVOS2A0A0J9YW53 1432 aa12.54□□□□□ -0.4
CAPN3-219ENST00000569136 OVOS2Q6IE36 1432 aa12.54□□□□□ -0.4
CAPN3-219ENST00000569136 NWD2Q9ULI1 1742 aa12.54□□□□□ -0.4
CAPN3-219ENST00000569136 COL5A2P05997 1499 aaPredicted RBP12.54□□□□□ -0.4
CAPN3-219ENST00000569136 PPP1R3GB7ZBB8 358 aa12.54□□□□□ -0.4
CAPN3-219ENST00000569136 FBLN1P23142 703 aa12.54□□□□□ -0.4
CAPN3-219ENST00000569136 PBX2P40425 430 aa12.54□□□□□ -0.4
CAPN3-219ENST00000569136 KIF24Q5T7B8 1368 aa12.54□□□□□ -0.4
CAPN3-219ENST00000569136 CCDC7Q96M83 1385 aa12.54□□□□□ -0.4
CAPN3-219ENST00000569136 NSD3Q9BZ95 1437 aa12.54□□□□□ -0.4
CAPN3-219ENST00000569136 PRKCSHP14314 528 aaPredicted RBP12.53□□□□□ -0.4
CAPN3-219ENST00000569136 RRS1Q15050 365 aaKnown RBP12.53□□□□□ -0.4
CAPN3-219ENST00000569136 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.52□□□□□ -0.41
CAPN3-219ENST00000569136 MARF1Q9Y4F3 1742 aaKnown RBP12.52□□□□□ -0.41
CAPN3-219ENST00000569136 IL2RBP14784 551 aa12.52□□□□□ -0.41
CAPN3-219ENST00000569136 HIC1Q14526 733 aa12.52□□□□□ -0.41
CAPN3-219ENST00000569136 POTEEQ6S8J3 1075 aa12.52□□□□□ -0.41
CAPN3-219ENST00000569136 MORC1Q86VD1 984 aa12.52□□□□□ -0.41
CAPN3-219ENST00000569136 KRI1Q8N9T8 703 aaKnown RBP12.52□□□□□ -0.41
CAPN3-219ENST00000569136 LTV1Q96GA3 475 aaPredicted RBP12.52□□□□□ -0.41
CAPN3-219ENST00000569136 NPDC1Q9NQX5 325 aaPredicted RBP12.52□□□□□ -0.41
CAPN3-219ENST00000569136 BLMP54132 1417 aaPredicted RBP12.52□□□□□ -0.41
CAPN3-219ENST00000569136 GLI3P10071 1580 aa12.52□□□□□ -0.41
CAPN3-219ENST00000569136 NRKQ7Z2Y5 1582 aa12.52□□□□□ -0.41
CAPN3-219ENST00000569136 ZEB1P37275 1124 aaPredicted RBP12.51□□□□□ -0.41
CAPN3-219ENST00000569136 NSD2O96028 1365 aa12.51□□□□□ -0.41
CAPN3-219ENST00000569136 GNPATO15228 680 aa12.5□□□□□ -0.41
CAPN3-219ENST00000569136 GPR37O15354 613 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 268.5 ms