RNA–Protein interactions for RNA: ENST00000569128.1

CDH11-216, Transcript of cadherin 11, humanhuman

TSL 3

Gene CDH11, Length 781 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-216ENST00000569128 VASH1Q7L8A9 365 aaPredicted RBP11.9□□□□□ -0.5
CDH11-216ENST00000569128 CFDP1Q9UEE9 299 aaPredicted RBP11.9□□□□□ -0.5
CDH11-216ENST00000569128 DOLKQ9UPQ8 538 aa11.9□□□□□ -0.5
CDH11-216ENST00000569128 ABCA9Q8IUA7 1624 aa11.89□□□□□ -0.51
CDH11-216ENST00000569128 DIP2BQ9P265 1576 aa11.89□□□□□ -0.51
CDH11-216ENST00000569128 MAP7D1Q3KQU3 841 aa11.89□□□□□ -0.51
CDH11-216ENST00000569128 RNF20Q5VTR2 975 aa11.89□□□□□ -0.51
CDH11-216ENST00000569128 SPRYD7Q5W111 196 aa11.89□□□□□ -0.51
CDH11-216ENST00000569128 TRAF7Q6Q0C0 670 aa11.89□□□□□ -0.51
CDH11-216ENST00000569128 PLCH2O75038 1416 aa11.88□□□□□ -0.51
CDH11-216ENST00000569128 RRBP1Q9P2E9 1410 aaKnown RBP11.88□□□□□ -0.51
CDH11-216ENST00000569128 TMCO4Q5TGY1 634 aa11.88□□□□□ -0.51
CDH11-216ENST00000569128 MAP4K5Q9Y4K4 846 aa11.88□□□□□ -0.51
CDH11-216ENST00000569128 TLL2Q9Y6L7 1015 aa11.88□□□□□ -0.51
CDH11-216ENST00000569128 CDC42BPBQ9Y5S2 1711 aa11.88□□□□□ -0.51
CDH11-216ENST00000569128 CD109Q6YHK3 1445 aa11.87□□□□□ -0.51
CDH11-216ENST00000569128 OXLD1Q5BKU9 147 aa11.87□□□□□ -0.51
CDH11-216ENST00000569128 RGS22Q8NE09 1264 aa11.87□□□□□ -0.51
CDH11-216ENST00000569128 MKRN1Q9UHC7 482 aaKnown RBP11.87□□□□□ -0.51
CDH11-216ENST00000569128 GLI2P10070 1586 aa11.87□□□□□ -0.51
CDH11-216ENST00000569128 WNT7AO00755 349 aa11.86□□□□□ -0.51
CDH11-216ENST00000569128 ITGAEP38570 1179 aa11.86□□□□□ -0.51
CDH11-216ENST00000569128 EML3Q32P44 896 aa11.86□□□□□ -0.51
CDH11-216ENST00000569128 INTS6LQ5JSJ4 861 aaKnown RBP11.86□□□□□ -0.51
CDH11-216ENST00000569128 SEPT12Q8IYM1 358 aa11.86□□□□□ -0.51
CDH11-216ENST00000569128 MRGPRX2Q96LB1 330 aa11.86□□□□□ -0.51
CDH11-216ENST00000569128 CDK15Q96Q40 435 aa11.86□□□□□ -0.51
CDH11-216ENST00000569128 CDCA7Q9BWT1 371 aaPredicted RBP11.86□□□□□ -0.51
CDH11-216ENST00000569128 PCGF6Q9BYE7 350 aa11.86□□□□□ -0.51
CDH11-216ENST00000569128 PRKD2Q9BZL6 878 aa11.86□□□□□ -0.51
CDH11-216ENST00000569128 PCDHB11Q9Y5F2 797 aa11.86□□□□□ -0.51
CDH11-216ENST00000569128 KIF13AQ9H1H9 1805 aa11.86□□□□□ -0.51
CDH11-216ENST00000569128 MYO5CQ9NQX4 1742 aa11.86□□□□□ -0.51
CDH11-216ENST00000569128 PREX2Q70Z35 1606 aa11.86□□□□□ -0.51
CDH11-216ENST00000569128 PTPN23Q9H3S7 1636 aa11.86□□□□□ -0.51
CDH11-216ENST00000569128 ARHGAP5Q13017 1502 aa11.86□□□□□ -0.51
CDH11-216ENST00000569128 MIA2Q96PC5 1412 aa11.86□□□□□ -0.51
CDH11-216ENST00000569128 SIAH2O43255 324 aa11.85□□□□□ -0.51
CDH11-216ENST00000569128 LZTS3O60299 673 aaPredicted RBP11.85□□□□□ -0.51
CDH11-216ENST00000569128 ZNF697Q5TEC3 545 aa11.85□□□□□ -0.51
CDH11-216ENST00000569128 EFCAB2Q5VUJ9 269 aa11.85□□□□□ -0.51
CDH11-216ENST00000569128 ITSN2Q9NZM3 1697 aa11.84□□□□□ -0.51
CDH11-216ENST00000569128 ATG7O95352 703 aa11.84□□□□□ -0.51
CDH11-216ENST00000569128 FSHRP23945 695 aa11.84□□□□□ -0.51
CDH11-216ENST00000569128 HNRNPMP52272 730 aaKnown RBP eCLIP11.84□□□□□ -0.51
CDH11-216ENST00000569128 FOXC1Q12948 553 aa11.84□□□□□ -0.51
CDH11-216ENST00000569128 MAP3K4Q9Y6R4 1608 aa11.84□□□□□ -0.51
CDH11-216ENST00000569128 TCOF1Q13428 1488 aaKnown RBP11.83□□□□□ -0.52
CDH11-216ENST00000569128 CSB-PGBD3P0DP91 1061 aa11.83□□□□□ -0.52
CDH11-216ENST00000569128 GRM5P41594 1212 aa11.83□□□□□ -0.52
CDH11-216ENST00000569128 ZNF598Q86UK7 904 aaKnown RBP11.83□□□□□ -0.52
CDH11-216ENST00000569128 SAMD9LQ8IVG5 1584 aa11.83□□□□□ -0.52
CDH11-216ENST00000569128 TSPOAP1O95153 1857 aa11.83□□□□□ -0.52
CDH11-216ENST00000569128 CAMSAP2Q08AD1 1489 aa11.83□□□□□ -0.52
CDH11-216ENST00000569128 ATP5J2-PTCD1G3V325 749 aa11.82□□□□□ -0.52
CDH11-216ENST00000569128 PDE4CQ08493 712 aa11.82□□□□□ -0.52
CDH11-216ENST00000569128 NOD1Q9Y239 953 aa11.82□□□□□ -0.52
CDH11-216ENST00000569128 ARHGEF12Q9NZN5 1544 aa11.81□□□□□ -0.52
CDH11-216ENST00000569128 PTPRKQ15262 1439 aa11.81□□□□□ -0.52
CDH11-216ENST00000569128 ERVH48-1M5A8F1 160 aa11.81□□□□□ -0.52
CDH11-216ENST00000569128 RASA1P20936 1047 aa11.81□□□□□ -0.52
CDH11-216ENST00000569128 CRTC2Q53ET0 693 aaPredicted RBP11.81□□□□□ -0.52
CDH11-216ENST00000569128 MPNDQ8N594 471 aa11.81□□□□□ -0.52
CDH11-216ENST00000569128 GZF1Q9H116 711 aaPredicted RBP11.81□□□□□ -0.52
CDH11-216ENST00000569128 FANCAO15360 1455 aa11.81□□□□□ -0.52
CDH11-216ENST00000569128 AKNAQ7Z591 1439 aa11.8□□□□□ -0.52
CDH11-216ENST00000569128 MFAP1P55081 439 aaKnown RBP11.8□□□□□ -0.52
CDH11-216ENST00000569128 LARP1Q6PKG0 1096 aaKnown RBP11.8□□□□□ -0.52
CDH11-216ENST00000569128 CCDC125Q86Z20 511 aa11.8□□□□□ -0.52
CDH11-216ENST00000569128 V9GY48 417 aaPredicted RBP11.8□□□□□ -0.52
CDH11-216ENST00000569128 PPRC1Q5VV67 1664 aaKnown RBP11.8□□□□□ -0.52
CDH11-216ENST00000569128 ARAP3Q8WWN8 1544 aa11.8□□□□□ -0.52
CDH11-216ENST00000569128 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.79□□□□□ -0.52
CDH11-216ENST00000569128 CARNS1A5YM72 827 aa11.79□□□□□ -0.52
CDH11-216ENST00000569128 USP17L15C9J2P7 530 aa11.79□□□□□ -0.52
CDH11-216ENST00000569128 USP17L10C9JJH3 530 aa11.79□□□□□ -0.52
CDH11-216ENST00000569128 USP17L13C9JLJ4 530 aa11.79□□□□□ -0.52
CDH11-216ENST00000569128 USP17L12C9JPN9 530 aa11.79□□□□□ -0.52
CDH11-216ENST00000569128 USP17L11C9JVI0 530 aa11.79□□□□□ -0.52
CDH11-216ENST00000569128 USP17L21D6R901 530 aa11.79□□□□□ -0.52
CDH11-216ENST00000569128 USP17L18D6R9N7 530 aa11.79□□□□□ -0.52
CDH11-216ENST00000569128 USP17L22D6RA61 530 aa11.79□□□□□ -0.52
CDH11-216ENST00000569128 USP17L17D6RBQ6 530 aa11.79□□□□□ -0.52
CDH11-216ENST00000569128 USP17L19D6RCP7 530 aa11.79□□□□□ -0.52
CDH11-216ENST00000569128 USP17L20D6RJB6 530 aa11.79□□□□□ -0.52
CDH11-216ENST00000569128 ADH1CP00326 375 aa11.79□□□□□ -0.52
CDH11-216ENST00000569128 USP17L24Q0WX57 530 aa11.79□□□□□ -0.52
CDH11-216ENST00000569128 OGFOD1Q8N543 542 aa11.79□□□□□ -0.52
CDH11-216ENST00000569128 PKD2L1Q9P0L9 805 aa11.79□□□□□ -0.52
CDH11-216ENST00000569128 MTMR7Q9Y216 660 aa11.79□□□□□ -0.52
CDH11-216ENST00000569128 ABCC5O15440 1437 aa11.78□□□□□ -0.52
CDH11-216ENST00000569128 MBD5Q9P267 1494 aa11.78□□□□□ -0.52
CDH11-216ENST00000569128 SYCP2Q9BX26 1530 aa11.78□□□□□ -0.52
CDH11-216ENST00000569128 FAM196BA6NMK8 535 aa11.78□□□□□ -0.52
CDH11-216ENST00000569128 CLDN10P78369 228 aa11.78□□□□□ -0.52
CDH11-216ENST00000569128 USP4Q13107 963 aa11.78□□□□□ -0.52
CDH11-216ENST00000569128 TRIM50Q86XT4 487 aa11.78□□□□□ -0.52
CDH11-216ENST00000569128 ZNF594Q96JF6 807 aaPredicted RBP11.78□□□□□ -0.52
CDH11-216ENST00000569128 TMPRSS4Q9NRS4 437 aa11.78□□□□□ -0.52
CDH11-216ENST00000569128 ZMIZ1Q9ULJ6 1067 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms