RNA–Protein interactions for RNA: ENST00000569095.1

CDH11-215, Transcript of cadherin 11, humanhuman

TSL 3

Gene CDH11, Length 436 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-215ENST00000569095 SERPINA10Q9UK55 444 aa6.37□□□□□ -1.39
CDH11-215ENST00000569095 USP4Q13107 963 aa6.36□□□□□ -1.39
CDH11-215ENST00000569095 TLR1Q15399 786 aa6.36□□□□□ -1.39
CDH11-215ENST00000569095 ZNF385CQ66K41 422 aaPredicted RBP6.36□□□□□ -1.39
CDH11-215ENST00000569095 TMEM214Q6NUQ4 689 aaKnown RBP6.36□□□□□ -1.39
CDH11-215ENST00000569095 CCDC82Q8N4S0 544 aa6.36□□□□□ -1.39
CDH11-215ENST00000569095 C1orf115Q9H7X2 142 aa6.36□□□□□ -1.39
CDH11-215ENST00000569095 DYRK1BQ9Y463 629 aa6.36□□□□□ -1.39
CDH11-215ENST00000569095 SPATA31C2B4DYI2 1134 aa6.35□□□□□ -1.39
CDH11-215ENST00000569095 ADAMTS2O95450 1211 aa6.35□□□□□ -1.39
CDH11-215ENST00000569095 TRIM22Q8IYM9 498 aa6.35□□□□□ -1.39
CDH11-215ENST00000569095 XAGE2Q96GT9 111 aa6.35□□□□□ -1.39
CDH11-215ENST00000569095 FHDC1Q9C0D6 1143 aaPredicted RBP6.35□□□□□ -1.39
CDH11-215ENST00000569095 ALG2Q9H553 416 aa6.35□□□□□ -1.39
CDH11-215ENST00000569095 SKIP12755 728 aa6.34□□□□□ -1.39
CDH11-215ENST00000569095 GTF2E1P29083 439 aaPredicted RBP6.34□□□□□ -1.39
CDH11-215ENST00000569095 GDF10P55107 478 aa6.34□□□□□ -1.39
CDH11-215ENST00000569095 C4orf17Q53FE4 359 aa6.34□□□□□ -1.39
CDH11-215ENST00000569095 ESCO1Q5FWF5 840 aa6.34□□□□□ -1.39
CDH11-215ENST00000569095 GNASQ5JWF2 1037 aa6.34□□□□□ -1.39
CDH11-215ENST00000569095 SERTAD1Q9UHV2 236 aa6.34□□□□□ -1.39
CDH11-215ENST00000569095 HRH3Q9Y5N1 445 aa6.34□□□□□ -1.39
CDH11-215ENST00000569095 PLA2G4AP47712 749 aa6.33□□□□□ -1.4
CDH11-215ENST00000569095 SCNN1DP51172 638 aa6.33□□□□□ -1.4
CDH11-215ENST00000569095 DEPDC4Q8N2C3 294 aa6.33□□□□□ -1.4
CDH11-215ENST00000569095 ADAMTS19Q8TE59 1207 aa6.33□□□□□ -1.4
CDH11-215ENST00000569095 NUCKS1Q9H1E3 243 aaKnown RBP6.33□□□□□ -1.4
CDH11-215ENST00000569095 RUBCNLQ9H714 662 aa6.33□□□□□ -1.4
CDH11-215ENST00000569095 CHIC2Q9UKJ5 165 aa6.33□□□□□ -1.4
CDH11-215ENST00000569095 H7C1W4 665 aa6.32□□□□□ -1.4
CDH11-215ENST00000569095 F11P03951 625 aa6.32□□□□□ -1.4
CDH11-215ENST00000569095 THBS1P07996 1170 aa6.32□□□□□ -1.4
CDH11-215ENST00000569095 LYPD4Q6UWN0 246 aa6.32□□□□□ -1.4
CDH11-215ENST00000569095 SIRT1Q96EB6 747 aa6.32□□□□□ -1.4
CDH11-215ENST00000569095 ADAMTS8Q9UP79 889 aa6.32□□□□□ -1.4
CDH11-215ENST00000569095 SLURP2P0DP57 97 aa6.31□□□□□ -1.4
CDH11-215ENST00000569095 RFX1P22670 979 aa6.31□□□□□ -1.4
CDH11-215ENST00000569095 NCOA4Q13772 614 aa6.31□□□□□ -1.4
CDH11-215ENST00000569095 MAP7D1Q3KQU3 841 aa6.31□□□□□ -1.4
CDH11-215ENST00000569095 FOXR1Q6PIV2 292 aa6.31□□□□□ -1.4
CDH11-215ENST00000569095 IGF1RP08069 1367 aa6.31□□□□□ -1.4
CDH11-215ENST00000569095 A0A1B0GTH6 734 aa6.3□□□□□ -1.4
CDH11-215ENST00000569095 TMEM229AB2RXF0 380 aa6.3□□□□□ -1.4
CDH11-215ENST00000569095 INHAP05111 366 aa6.3□□□□□ -1.4
CDH11-215ENST00000569095 MSX1P28360 303 aa6.3□□□□□ -1.4
CDH11-215ENST00000569095 PSME1Q06323 249 aa6.3□□□□□ -1.4
CDH11-215ENST00000569095 EML3Q32P44 896 aa6.3□□□□□ -1.4
CDH11-215ENST00000569095 RHBDD1Q8TEB9 315 aa6.3□□□□□ -1.4
CDH11-215ENST00000569095 TRERF1Q96PN7 1200 aa6.3□□□□□ -1.4
CDH11-215ENST00000569095 PPP1R12CQ9BZL4 782 aa6.3□□□□□ -1.4
CDH11-215ENST00000569095 MBIPQ9NS73 344 aa6.3□□□□□ -1.4
CDH11-215ENST00000569095 TFIP11Q9UBB9 837 aaKnown RBP6.3□□□□□ -1.4
CDH11-215ENST00000569095 USP3Q9Y6I4 520 aa6.3□□□□□ -1.4
CDH11-215ENST00000569095 USP17L5A8MUK1 530 aa6.29□□□□□ -1.4
CDH11-215ENST00000569095 LMOD1P29536 600 aaPredicted RBP6.29□□□□□ -1.4
CDH11-215ENST00000569095 GTF2IP78347 998 aa6.29□□□□□ -1.4
CDH11-215ENST00000569095 SRSF11Q05519 484 aaKnown RBP6.29□□□□□ -1.4
CDH11-215ENST00000569095 WDR44Q5JSH3 913 aa6.29□□□□□ -1.4
CDH11-215ENST00000569095 PPARGC1BQ86YN6 1023 aaKnown RBP6.29□□□□□ -1.4
CDH11-215ENST00000569095 AIDAQ96BJ3 306 aa6.29□□□□□ -1.4
CDH11-215ENST00000569095 GMCL1Q96IK5 515 aa6.29□□□□□ -1.4
CDH11-215ENST00000569095 PALM3A6NDB9 673 aaPredicted RBP6.28□□□□□ -1.4
CDH11-215ENST00000569095 CELA2BP08218 269 aaPredicted RBP6.28□□□□□ -1.4
CDH11-215ENST00000569095 CSB-PGBD3P0DP91 1061 aa6.28□□□□□ -1.4
CDH11-215ENST00000569095 MX2P20592 715 aa6.28□□□□□ -1.4
CDH11-215ENST00000569095 SMTNP53814 917 aa6.28□□□□□ -1.4
CDH11-215ENST00000569095 MAP3K10Q02779 954 aa6.28□□□□□ -1.4
CDH11-215ENST00000569095 PGBD3Q8N328 593 aa6.28□□□□□ -1.4
CDH11-215ENST00000569095 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.28□□□□□ -1.4
CDH11-215ENST00000569095 NOD1Q9Y239 953 aa6.28□□□□□ -1.4
CDH11-215ENST00000569095 PCDHGA11Q9Y5H2 935 aa6.28□□□□□ -1.4
CDH11-215ENST00000569095 ACIN1Q9UKV3 1341 aaKnown RBP6.27□□□□□ -1.41
CDH11-215ENST00000569095 ATP9BO43861 1147 aa6.27□□□□□ -1.41
CDH11-215ENST00000569095 ARHGEF15O94989 841 aa6.27□□□□□ -1.41
CDH11-215ENST00000569095 TBC1D9Q6ZT07 1266 aa6.27□□□□□ -1.41
CDH11-215ENST00000569095 UCN2Q96RP3 112 aa6.27□□□□□ -1.41
CDH11-215ENST00000569095 PARP3Q9Y6F1 533 aa6.27□□□□□ -1.41
CDH11-215ENST00000569095 MARSP56192 900 aaKnown RBP6.26□□□□□ -1.41
CDH11-215ENST00000569095 TBCELQ5QJ74 424 aa6.26□□□□□ -1.41
CDH11-215ENST00000569095 ACDQ96AP0 544 aa6.26□□□□□ -1.41
CDH11-215ENST00000569095 ABHD17AQ96GS6 310 aa6.26□□□□□ -1.41
CDH11-215ENST00000569095 ZNF358Q9NW07 568 aa6.26□□□□□ -1.41
CDH11-215ENST00000569095 CABP1Q9NZU7 370 aa6.26□□□□□ -1.41
CDH11-215ENST00000569095 USP17L3A6NCW0 530 aa6.25□□□□□ -1.41
CDH11-215ENST00000569095 USP17L4A6NCW7 530 aa6.25□□□□□ -1.41
CDH11-215ENST00000569095 A6NJY4 79 aa6.25□□□□□ -1.41
CDH11-215ENST00000569095 ATP4AP20648 1035 aa6.25□□□□□ -1.41
CDH11-215ENST00000569095 IRS1P35568 1242 aa6.25□□□□□ -1.41
CDH11-215ENST00000569095 GSK3AP49840 483 aa6.25□□□□□ -1.41
CDH11-215ENST00000569095 UBAP2LQ14157 1087 aaKnown RBP6.25□□□□□ -1.41
CDH11-215ENST00000569095 EFHC2Q5JST6 749 aa6.25□□□□□ -1.41
CDH11-215ENST00000569095 USP17L2Q6R6M4 530 aa6.25□□□□□ -1.41
CDH11-215ENST00000569095 USP17L1Q7RTZ2 530 aa6.25□□□□□ -1.41
CDH11-215ENST00000569095 NFATC2IPQ8NCF5 419 aa6.25□□□□□ -1.41
CDH11-215ENST00000569095 NIFKQ9BYG3 293 aaKnown RBP6.25□□□□□ -1.41
CDH11-215ENST00000569095 KIAA1024Q9UPX6 916 aa6.25□□□□□ -1.41
CDH11-215ENST00000569095 CDCA8Q53HL2 280 aa6.24□□□□□ -1.41
CDH11-215ENST00000569095 KCTD17Q8N5Z5 321 aa6.24□□□□□ -1.41
CDH11-215ENST00000569095 NEDD1Q8NHV4 660 aa6.24□□□□□ -1.41
CDH11-215ENST00000569095 TPCN2Q8NHX9 752 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms