RNA–Protein interactions for RNA: ENST00000568977.1

CPNE7-209, Transcript of copine 7, humanhuman

TSL 5

Gene CPNE7, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-209ENST00000568977 LINC00116Q8NCU8 138 aa25.27■■□□□ 1.64
CPNE7-209ENST00000568977 ZNF831Q5JPB2 1677 aa25.26■■□□□ 1.63
CPNE7-209ENST00000568977 AMIGO3Q86WK7 504 aa25.26■■□□□ 1.63
CPNE7-209ENST00000568977 NPC1L1Q9UHC9 1359 aa25.26■■□□□ 1.63
CPNE7-209ENST00000568977 ITPK1Q13572 414 aa25.25■■□□□ 1.63
CPNE7-209ENST00000568977 C1orf141Q5JVX7 400 aa25.25■■□□□ 1.63
CPNE7-209ENST00000568977 SCN11AQ9UI33 1791 aa25.24■■□□□ 1.63
CPNE7-209ENST00000568977 PHF14O94880 888 aa25.24■■□□□ 1.63
CPNE7-209ENST00000568977 ATP6V1AP38606 617 aa25.24■■□□□ 1.63
CPNE7-209ENST00000568977 COL5A3P25940 1745 aaPredicted RBP25.23■■□□□ 1.63
CPNE7-209ENST00000568977 CHD4Q14839 1912 aa25.23■■□□□ 1.63
CPNE7-209ENST00000568977 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.22■■□□□ 1.63
CPNE7-209ENST00000568977 SSFA2P28290 1259 aa25.21■■□□□ 1.63
CPNE7-209ENST00000568977 CABP4P57796 275 aa25.21■■□□□ 1.63
CPNE7-209ENST00000568977 SMIM5Q71RC9 77 aa25.21■■□□□ 1.63
CPNE7-209ENST00000568977 COL3A1P02461 1466 aaPredicted RBP25.21■■□□□ 1.63
CPNE7-209ENST00000568977 NLGN2Q8NFZ4 835 aa25.2■■□□□ 1.62
CPNE7-209ENST00000568977 VIRMAQ69YN4 1812 aaKnown RBP25.2■■□□□ 1.62
CPNE7-209ENST00000568977 UTRNP46939 3433 aa25.19■■□□□ 1.62
CPNE7-209ENST00000568977 GNPATO15228 680 aa25.19■■□□□ 1.62
CPNE7-209ENST00000568977 HMOX1P09601 288 aa25.18■■□□□ 1.62
CPNE7-209ENST00000568977 CNGB1Q14028 1251 aaPredicted RBP25.18■■□□□ 1.62
CPNE7-209ENST00000568977 SLC4A9Q96Q91 983 aa25.18■■□□□ 1.62
CPNE7-209ENST00000568977 RBM42Q9BTD8 480 aaKnown RBP25.18■■□□□ 1.62
CPNE7-209ENST00000568977 DIAPH1O60610 1272 aaKnown RBP25.17■■□□□ 1.62
CPNE7-209ENST00000568977 CICQ96RK0 1608 aaPredicted RBP25.15■■□□□ 1.62
CPNE7-209ENST00000568977 MRC1P22897 1456 aa25.15■■□□□ 1.62
CPNE7-209ENST00000568977 GPR162Q16538 588 aa25.15■■□□□ 1.62
CPNE7-209ENST00000568977 AKAP4Q5JQC9 854 aa25.15■■□□□ 1.62
CPNE7-209ENST00000568977 TJP1Q07157 1748 aa25.15■■□□□ 1.62
CPNE7-209ENST00000568977 ADAMTS7Q9UKP4 1686 aa25.13■■□□□ 1.61
CPNE7-209ENST00000568977 MYH14Q7Z406 1995 aaKnown RBP25.13■■□□□ 1.61
CPNE7-209ENST00000568977 PELP1Q8IZL8 1130 aaKnown RBP25.13■■□□□ 1.61
CPNE7-209ENST00000568977 NFATC2IPQ8NCF5 419 aa25.13■■□□□ 1.61
CPNE7-209ENST00000568977 CNTNAP4Q9C0A0 1308 aa25.12■■□□□ 1.61
CPNE7-209ENST00000568977 C4AP0C0L4 1744 aa25.12■■□□□ 1.61
CPNE7-209ENST00000568977 RTCBQ9Y3I0 505 aaKnown RBP25.11■■□□□ 1.61
CPNE7-209ENST00000568977 PTCD1O75127 700 aaKnown RBP25.1■■□□□ 1.61
CPNE7-209ENST00000568977 CD2APQ9Y5K6 639 aa25.1■■□□□ 1.61
CPNE7-209ENST00000568977 RC3H1Q5TC82 1133 aaKnown RBP25.09■■□□□ 1.61
CPNE7-209ENST00000568977 MTHFSDQ2M296 383 aaKnown RBP25.08■■□□□ 1.61
CPNE7-209ENST00000568977 SLC52A2Q9HAB3 445 aa25.08■■□□□ 1.61
CPNE7-209ENST00000568977 U2SURPO15042 1029 aaKnown RBP25.07■■□□□ 1.6
CPNE7-209ENST00000568977 RNMTO43148 476 aaKnown RBP25.07■■□□□ 1.6
CPNE7-209ENST00000568977 LGR6Q9HBX8 967 aa25.07■■□□□ 1.6
CPNE7-209ENST00000568977 GOLGB1Q14789 3259 aaKnown RBP25.06■■□□□ 1.6
CPNE7-209ENST00000568977 YBX3P16989 372 aaKnown RBP eCLIP25.06■■□□□ 1.6
CPNE7-209ENST00000568977 ADRA2BP18089 450 aa25.06■■□□□ 1.6
CPNE7-209ENST00000568977 TRAPPC3LQ5T215 181 aa25.06■■□□□ 1.6
CPNE7-209ENST00000568977 KCPQ6ZWJ8 1503 aa25.04■■□□□ 1.6
CPNE7-209ENST00000568977 RPS6KA4O75676 772 aa25.04■■□□□ 1.6
CPNE7-209ENST00000568977 ZNF784Q8NCA9 323 aaPredicted RBP25.04■■□□□ 1.6
CPNE7-209ENST00000568977 CRKLP46109 303 aaKnown RBP25.03■■□□□ 1.6
CPNE7-209ENST00000568977 ARHGEF1Q92888 912 aaKnown RBP25.03■■□□□ 1.6
CPNE7-209ENST00000568977 UBR2Q8IWV8 1755 aa25.03■■□□□ 1.6
CPNE7-209ENST00000568977 KIF13BQ9NQT8 1826 aa25.02■■□□□ 1.6
CPNE7-209ENST00000568977 MMP10P09238 476 aa25.02■■□□□ 1.6
CPNE7-209ENST00000568977 CFAP53Q96M91 514 aa25.01■■□□□ 1.59
CPNE7-209ENST00000568977 GRIN3BO60391 1043 aa25■■□□□ 1.59
CPNE7-209ENST00000568977 RFC4P35249 363 aa25■■□□□ 1.59
CPNE7-209ENST00000568977 SLC39A6Q13433 755 aa25■■□□□ 1.59
CPNE7-209ENST00000568977 SIPA1L3O60292 1781 aaPredicted RBP24.99■■□□□ 1.59
CPNE7-209ENST00000568977 NLGN1Q8N2Q7 840 aa24.99■■□□□ 1.59
CPNE7-209ENST00000568977 GAS2L2Q8NHY3 880 aa24.99■■□□□ 1.59
CPNE7-209ENST00000568977 KIAA1551Q9HCM1 1747 aa24.99■■□□□ 1.59
CPNE7-209ENST00000568977 GYS1P13807 737 aa24.98■■□□□ 1.59
CPNE7-209ENST00000568977 PPP2R1AP30153 589 aa24.98■■□□□ 1.59
CPNE7-209ENST00000568977 DNAJC10Q8IXB1 793 aa24.98■■□□□ 1.59
CPNE7-209ENST00000568977 C10orf71Q711Q0 1435 aa24.96■■□□□ 1.59
CPNE7-209ENST00000568977 INTS5Q6P9B9 1019 aaKnown RBP24.96■■□□□ 1.59
CPNE7-209ENST00000568977 USP42Q9H9J4 1324 aaKnown RBP24.95■■□□□ 1.58
CPNE7-209ENST00000568977 GNAT3A8MTJ3 354 aa24.95■■□□□ 1.58
CPNE7-209ENST00000568977 PRKAR2BP31323 418 aa24.95■■□□□ 1.58
CPNE7-209ENST00000568977 RSPH6AQ9H0K4 717 aa24.95■■□□□ 1.58
CPNE7-209ENST00000568977 PXDNLA1KZ92 1463 aa24.95■■□□□ 1.58
CPNE7-209ENST00000568977 CCDC87Q9NVE4 849 aa24.94■■□□□ 1.58
CPNE7-209ENST00000568977 WWC3Q9ULE0 1092 aa24.94■■□□□ 1.58
CPNE7-209ENST00000568977 N4BP2Q86UW6 1770 aaPredicted RBP24.94■■□□□ 1.58
CPNE7-209ENST00000568977 SRP68Q9UHB9 627 aaKnown RBP24.93■■□□□ 1.58
CPNE7-209ENST00000568977 NUDCQ9Y266 331 aa24.93■■□□□ 1.58
CPNE7-209ENST00000568977 CYP19A1P11511 503 aaPredicted RBP24.92■■□□□ 1.58
CPNE7-209ENST00000568977 TEFQ10587 303 aa24.92■■□□□ 1.58
CPNE7-209ENST00000568977 IL17REQ8NFR9 667 aa24.92■■□□□ 1.58
CPNE7-209ENST00000568977 SOS1Q07889 1333 aaPredicted RBP24.91■■□□□ 1.58
CPNE7-209ENST00000568977 PHACTR3Q96KR7 559 aa24.91■■□□□ 1.58
CPNE7-209ENST00000568977 TTC5Q8N0Z6 440 aa24.9■■□□□ 1.58
CPNE7-209ENST00000568977 VSIG10Q8N0Z9 540 aa24.9■■□□□ 1.58
CPNE7-209ENST00000568977 PARP3Q9Y6F1 533 aa24.9■■□□□ 1.58
CPNE7-209ENST00000568977 CEMIPQ8WUJ3 1361 aa24.9■■□□□ 1.58
CPNE7-209ENST00000568977 U2AF1L5P0DN76 240 aaPredicted RBP24.89■■□□□ 1.58
CPNE7-209ENST00000568977 U2AF1Q01081 240 aaKnown RBP eCLIP24.89■■□□□ 1.58
CPNE7-209ENST00000568977 ZBTB1Q9Y2K1 713 aa24.89■■□□□ 1.58
CPNE7-209ENST00000568977 BRCA1P38398 1863 aaKnown RBP24.89■■□□□ 1.57
CPNE7-209ENST00000568977 COL15A1P39059 1388 aa24.89■■□□□ 1.57
CPNE7-209ENST00000568977 FKBP8Q14318 412 aa24.88■■□□□ 1.57
CPNE7-209ENST00000568977 HEG1Q9ULI3 1381 aa24.86■■□□□ 1.57
CPNE7-209ENST00000568977 TGFB2P61812 414 aa24.86■■□□□ 1.57
CPNE7-209ENST00000568977 DDR1Q08345 913 aa24.86■■□□□ 1.57
CPNE7-209ENST00000568977 ZNF790Q6PG37 636 aa24.86■■□□□ 1.57
CPNE7-209ENST00000568977 ZNF496Q96IT1 587 aaPredicted RBP24.85■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms