RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 ADRA2BP18089 450 aa21.71■■□□□ 1.07
HERPUD1-215ENST00000568676 TGFB2P61812 414 aa21.71■■□□□ 1.07
HERPUD1-215ENST00000568676 EIF4A2Q14240 407 aaKnown RBP21.71■■□□□ 1.07
HERPUD1-215ENST00000568676 NLGN1Q8N2Q7 840 aa21.71■■□□□ 1.07
HERPUD1-215ENST00000568676 RTCBQ9Y3I0 505 aaKnown RBP21.71■■□□□ 1.07
HERPUD1-215ENST00000568676 CICQ96RK0 1608 aaPredicted RBP21.7■■□□□ 1.06
HERPUD1-215ENST00000568676 RC3H1Q5TC82 1133 aaKnown RBP21.7■■□□□ 1.06
HERPUD1-215ENST00000568676 DCAF5Q96JK2 942 aa21.7■■□□□ 1.06
HERPUD1-215ENST00000568676 CLSPNQ9HAW4 1339 aa21.7■■□□□ 1.06
HERPUD1-215ENST00000568676 KDRP35968 1356 aa21.7■■□□□ 1.06
HERPUD1-215ENST00000568676 MMP10P09238 476 aa21.69■■□□□ 1.06
HERPUD1-215ENST00000568676 HSPA6P17066 643 aa21.69■■□□□ 1.06
HERPUD1-215ENST00000568676 TRAPPC3LQ5T215 181 aa21.69■■□□□ 1.06
HERPUD1-215ENST00000568676 IFFO2Q5TF58 517 aa21.68■■□□□ 1.06
HERPUD1-215ENST00000568676 SMIM5Q71RC9 77 aa21.68■■□□□ 1.06
HERPUD1-215ENST00000568676 AMOTQ4VCS5 1084 aa21.67■■□□□ 1.06
HERPUD1-215ENST00000568676 PLEKHO1Q53GL0 409 aaPredicted RBP21.67■■□□□ 1.06
HERPUD1-215ENST00000568676 ZNF526Q8TF50 670 aaPredicted RBP21.67■■□□□ 1.06
HERPUD1-215ENST00000568676 KIF13BQ9NQT8 1826 aa21.66■■□□□ 1.06
HERPUD1-215ENST00000568676 CNTNAP4Q9C0A0 1308 aa21.66■■□□□ 1.06
HERPUD1-215ENST00000568676 PXDNLA1KZ92 1463 aa21.65■■□□□ 1.06
HERPUD1-215ENST00000568676 CEP350Q5VT06 3117 aa21.65■■□□□ 1.06
HERPUD1-215ENST00000568676 CCDC87Q9NVE4 849 aa21.64■■□□□ 1.05
HERPUD1-215ENST00000568676 C10orf71Q711Q0 1435 aa21.63■■□□□ 1.05
HERPUD1-215ENST00000568676 RPS6KA4O75676 772 aa21.63■■□□□ 1.05
HERPUD1-215ENST00000568676 RFC4P35249 363 aa21.63■■□□□ 1.05
HERPUD1-215ENST00000568676 TNNT2P45379 298 aaPredicted RBP21.63■■□□□ 1.05
HERPUD1-215ENST00000568676 RBM42Q9BTD8 480 aaKnown RBP21.63■■□□□ 1.05
HERPUD1-215ENST00000568676 WWC3Q9ULE0 1092 aa21.63■■□□□ 1.05
HERPUD1-215ENST00000568676 CABP4P57796 275 aa21.62■■□□□ 1.05
HERPUD1-215ENST00000568676 ARHGEF1Q92888 912 aaKnown RBP21.62■■□□□ 1.05
HERPUD1-215ENST00000568676 COL5A3P25940 1745 aaPredicted RBP21.61■■□□□ 1.05
HERPUD1-215ENST00000568676 KIF3CO14782 793 aa21.61■■□□□ 1.05
HERPUD1-215ENST00000568676 SLC4A9Q96Q91 983 aa21.61■■□□□ 1.05
HERPUD1-215ENST00000568676 GYS1P13807 737 aa21.6■■□□□ 1.05
HERPUD1-215ENST00000568676 ZNF530Q6P9A1 599 aaPredicted RBP21.6■■□□□ 1.05
HERPUD1-215ENST00000568676 POLR3GLQ9BT43 218 aa21.6■■□□□ 1.05
HERPUD1-215ENST00000568676 BCS1LQ9Y276 419 aa21.6■■□□□ 1.05
HERPUD1-215ENST00000568676 PARP3Q9Y6F1 533 aa21.6■■□□□ 1.05
HERPUD1-215ENST00000568676 KIAA1551Q9HCM1 1747 aa21.6■■□□□ 1.05
HERPUD1-215ENST00000568676 C4AP0C0L4 1744 aa21.59■■□□□ 1.05
HERPUD1-215ENST00000568676 C1orf141Q5JVX7 400 aa21.59■■□□□ 1.05
HERPUD1-215ENST00000568676 KDM6AO15550 1401 aaPredicted RBP21.58■■□□□ 1.05
HERPUD1-215ENST00000568676 MTHFSP49914 203 aa21.58■■□□□ 1.05
HERPUD1-215ENST00000568676 EIF4G2P78344 907 aaKnown RBP eCLIP21.58■■□□□ 1.05
HERPUD1-215ENST00000568676 A0A0G2JLW4 131 aa21.57■■□□□ 1.04
HERPUD1-215ENST00000568676 PANK3Q9H999 370 aa21.57■■□□□ 1.04
HERPUD1-215ENST00000568676 TOMM70O94826 608 aa21.56■■□□□ 1.04
HERPUD1-215ENST00000568676 FCHSD2O94868 740 aa21.55■■□□□ 1.04
HERPUD1-215ENST00000568676 APLP1P51693 650 aa21.55■■□□□ 1.04
HERPUD1-215ENST00000568676 ARHGAP27Q6ZUM4 889 aa21.55■■□□□ 1.04
HERPUD1-215ENST00000568676 N4BP2Q86UW6 1770 aaPredicted RBP21.55■■□□□ 1.04
HERPUD1-215ENST00000568676 DPEP1P16444 411 aa21.54■■□□□ 1.04
HERPUD1-215ENST00000568676 MORC1Q86VD1 984 aa21.54■■□□□ 1.04
HERPUD1-215ENST00000568676 CRKLP46109 303 aaKnown RBP21.53■■□□□ 1.04
HERPUD1-215ENST00000568676 NFATC2IPQ8NCF5 419 aa21.53■■□□□ 1.04
HERPUD1-215ENST00000568676 PIM2Q9P1W9 311 aa21.53■■□□□ 1.04
HERPUD1-215ENST00000568676 PTCD1O75127 700 aaKnown RBP21.52■■□□□ 1.04
HERPUD1-215ENST00000568676 USP42Q9H9J4 1324 aaKnown RBP21.52■■□□□ 1.03
HERPUD1-215ENST00000568676 BRCA1P38398 1863 aaKnown RBP21.52■■□□□ 1.03
HERPUD1-215ENST00000568676 KCNA3P22001 575 aa21.5■■□□□ 1.03
HERPUD1-215ENST00000568676 SULT6B1Q6IMI4 303 aa21.5■■□□□ 1.03
HERPUD1-215ENST00000568676 MYH14Q7Z406 1995 aaKnown RBP21.5■■□□□ 1.03
HERPUD1-215ENST00000568676 HSPA5P11021 654 aaKnown RBP21.49■■□□□ 1.03
HERPUD1-215ENST00000568676 DALRD3Q5D0E6 543 aaKnown RBP21.49■■□□□ 1.03
HERPUD1-215ENST00000568676 AEBP1Q8IUX7 1158 aa21.49■■□□□ 1.03
HERPUD1-215ENST00000568676 KNSTRNQ9Y448 316 aa21.49■■□□□ 1.03
HERPUD1-215ENST00000568676 ARFGEF1Q9Y6D6 1849 aa21.49■■□□□ 1.03
HERPUD1-215ENST00000568676 AKAP4Q5JQC9 854 aa21.48■■□□□ 1.03
HERPUD1-215ENST00000568676 FKBP8Q14318 412 aa21.47■■□□□ 1.03
HERPUD1-215ENST00000568676 RBM46Q8TBY0 533 aaKnown RBP21.47■■□□□ 1.03
HERPUD1-215ENST00000568676 TJP1Q07157 1748 aa21.46■■□□□ 1.03
HERPUD1-215ENST00000568676 IL13P35225 146 aa21.46■■□□□ 1.03
HERPUD1-215ENST00000568676 C9orf131Q5VYM1 1079 aa21.46■■□□□ 1.03
HERPUD1-215ENST00000568676 KDM2BQ8NHM5 1336 aa21.46■■□□□ 1.03
HERPUD1-215ENST00000568676 SCN11AQ9UI33 1791 aa21.46■■□□□ 1.03
HERPUD1-215ENST00000568676 ZPR1O75312 459 aa21.45■■□□□ 1.02
HERPUD1-215ENST00000568676 INTS5Q6P9B9 1019 aaKnown RBP21.45■■□□□ 1.02
HERPUD1-215ENST00000568676 C16orf71Q8IYS4 520 aaPredicted RBP21.45■■□□□ 1.02
HERPUD1-215ENST00000568676 SLC52A2Q9HAB3 445 aa21.45■■□□□ 1.02
HERPUD1-215ENST00000568676 SRP68Q9UHB9 627 aaKnown RBP21.45■■□□□ 1.02
HERPUD1-215ENST00000568676 TM4SF1P30408 202 aa21.44■■□□□ 1.02
HERPUD1-215ENST00000568676 DDR1Q08345 913 aa21.44■■□□□ 1.02
HERPUD1-215ENST00000568676 NMRK2Q9NPI5 230 aa21.44■■□□□ 1.02
HERPUD1-215ENST00000568676 POLRMTO00411 1230 aaKnown RBP21.43■■□□□ 1.02
HERPUD1-215ENST00000568676 FSTL1Q12841 308 aa21.43■■□□□ 1.02
HERPUD1-215ENST00000568676 PCGF6Q9BYE7 350 aa21.43■■□□□ 1.02
HERPUD1-215ENST00000568676 MRC1P22897 1456 aa21.42■■□□□ 1.02
HERPUD1-215ENST00000568676 DNAJC5GQ8N7S2 189 aa21.42■■□□□ 1.02
HERPUD1-215ENST00000568676 ZC3H4Q9UPT8 1303 aaKnown RBP21.42■■□□□ 1.02
HERPUD1-215ENST00000568676 ADAMTS7Q9UKP4 1686 aa21.41■■□□□ 1.02
HERPUD1-215ENST00000568676 SOS1Q07889 1333 aaPredicted RBP21.41■■□□□ 1.02
HERPUD1-215ENST00000568676 DNAJC10Q8IXB1 793 aa21.4■■□□□ 1.02
HERPUD1-215ENST00000568676 VSIG10Q8N0Z9 540 aa21.4■■□□□ 1.02
HERPUD1-215ENST00000568676 RNF181Q9P0P0 153 aa21.4■■□□□ 1.02
HERPUD1-215ENST00000568676 CYP19A1P11511 503 aaPredicted RBP21.39■■□□□ 1.01
HERPUD1-215ENST00000568676 USPL1Q5W0Q7 1092 aa21.39■■□□□ 1.01
HERPUD1-215ENST00000568676 NARFQ9UHQ1 456 aa21.39■■□□□ 1.01
HERPUD1-215ENST00000568676 RNMTO43148 476 aaKnown RBP21.38■■□□□ 1.01
HERPUD1-215ENST00000568676 CHRNA5P30532 468 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms