RNA–Protein interactions for RNA: ENST00000568477.5

CMTM3-215, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-215ENST00000568477 HMOX1P09601 288 aa19.49■□□□□ 0.71
CMTM3-215ENST00000568477 MAP3K5Q99683 1374 aa19.48■□□□□ 0.71
CMTM3-215ENST00000568477 COL24A1Q17RW2 1714 aa19.48■□□□□ 0.71
CMTM3-215ENST00000568477 COL3A1P02461 1466 aaPredicted RBP19.48■□□□□ 0.71
CMTM3-215ENST00000568477 ATP6V1AP38606 617 aa19.47■□□□□ 0.71
CMTM3-215ENST00000568477 LINC00116Q8NCU8 138 aa19.47■□□□□ 0.71
CMTM3-215ENST00000568477 ITPK1Q13572 414 aa19.46■□□□□ 0.71
CMTM3-215ENST00000568477 AKAP4Q5JQC9 854 aa19.46■□□□□ 0.71
CMTM3-215ENST00000568477 RBM42Q9BTD8 480 aaKnown RBP19.45■□□□□ 0.7
CMTM3-215ENST00000568477 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.44■□□□□ 0.7
CMTM3-215ENST00000568477 U2SURPO15042 1029 aaKnown RBP19.44■□□□□ 0.7
CMTM3-215ENST00000568477 PHF14O94880 888 aa19.44■□□□□ 0.7
CMTM3-215ENST00000568477 MSL1Q68DK7 614 aa19.44■□□□□ 0.7
CMTM3-215ENST00000568477 KLHL34Q8N239 644 aa19.44■□□□□ 0.7
CMTM3-215ENST00000568477 UBR3Q6ZT12 1888 aa19.43■□□□□ 0.7
CMTM3-215ENST00000568477 GNPATO15228 680 aa19.43■□□□□ 0.7
CMTM3-215ENST00000568477 SSFA2P28290 1259 aa19.43■□□□□ 0.7
CMTM3-215ENST00000568477 AMIGO3Q86WK7 504 aa19.43■□□□□ 0.7
CMTM3-215ENST00000568477 NFATC2IPQ8NCF5 419 aa19.43■□□□□ 0.7
CMTM3-215ENST00000568477 CFAP53Q96M91 514 aa19.43■□□□□ 0.7
CMTM3-215ENST00000568477 ZNF831Q5JPB2 1677 aa19.41■□□□□ 0.7
CMTM3-215ENST00000568477 MTHFSDQ2M296 383 aaKnown RBP19.41■□□□□ 0.7
CMTM3-215ENST00000568477 SLC4A9Q96Q91 983 aa19.41■□□□□ 0.7
CMTM3-215ENST00000568477 SCN11AQ9UI33 1791 aa19.41■□□□□ 0.7
CMTM3-215ENST00000568477 SMIM5Q71RC9 77 aa19.4■□□□□ 0.7
CMTM3-215ENST00000568477 RNMTO43148 476 aaKnown RBP19.39■□□□□ 0.69
CMTM3-215ENST00000568477 PTCD1O75127 700 aaKnown RBP19.39■□□□□ 0.69
CMTM3-215ENST00000568477 PPP2R1AP30153 589 aa19.39■□□□□ 0.69
CMTM3-215ENST00000568477 SLC52A2Q9HAB3 445 aa19.39■□□□□ 0.69
CMTM3-215ENST00000568477 MRC1P22897 1456 aa19.38■□□□□ 0.69
CMTM3-215ENST00000568477 CNTNAP4Q9C0A0 1308 aa19.38■□□□□ 0.69
CMTM3-215ENST00000568477 LGR6Q9HBX8 967 aa19.38■□□□□ 0.69
CMTM3-215ENST00000568477 YY1P25490 414 aa19.37■□□□□ 0.69
CMTM3-215ENST00000568477 RC3H1Q5TC82 1133 aaKnown RBP19.37■□□□□ 0.69
CMTM3-215ENST00000568477 NUDCQ9Y266 331 aa19.37■□□□□ 0.69
CMTM3-215ENST00000568477 RTCBQ9Y3I0 505 aaKnown RBP19.37■□□□□ 0.69
CMTM3-215ENST00000568477 GAS2L2Q8NHY3 880 aa19.36■□□□□ 0.69
CMTM3-215ENST00000568477 COL5A3P25940 1745 aaPredicted RBP19.35■□□□□ 0.69
CMTM3-215ENST00000568477 NLGN2Q8NFZ4 835 aa19.35■□□□□ 0.69
CMTM3-215ENST00000568477 ADAMTS7Q9UKP4 1686 aa19.34■□□□□ 0.69
CMTM3-215ENST00000568477 ADRA2BP18089 450 aa19.34■□□□□ 0.69
CMTM3-215ENST00000568477 TRAPPC3LQ5T215 181 aa19.34■□□□□ 0.69
CMTM3-215ENST00000568477 RPS6KA4O75676 772 aa19.33■□□□□ 0.68
CMTM3-215ENST00000568477 PRKAR2BP31323 418 aa19.33■□□□□ 0.68
CMTM3-215ENST00000568477 GPR162Q16538 588 aa19.33■□□□□ 0.68
CMTM3-215ENST00000568477 GNAT3A8MTJ3 354 aa19.32■□□□□ 0.68
CMTM3-215ENST00000568477 U2AF1L5P0DN76 240 aaPredicted RBP19.32■□□□□ 0.68
CMTM3-215ENST00000568477 CRKLP46109 303 aaKnown RBP19.32■□□□□ 0.68
CMTM3-215ENST00000568477 U2AF1Q01081 240 aaKnown RBP eCLIP19.32■□□□□ 0.68
CMTM3-215ENST00000568477 RSPH6AQ9H0K4 717 aa19.32■□□□□ 0.68
CMTM3-215ENST00000568477 CD2APQ9Y5K6 639 aa19.32■□□□□ 0.68
CMTM3-215ENST00000568477 CICQ96RK0 1608 aaPredicted RBP19.32■□□□□ 0.68
CMTM3-215ENST00000568477 VIRMAQ69YN4 1812 aaKnown RBP19.32■□□□□ 0.68
CMTM3-215ENST00000568477 TJP1Q07157 1748 aa19.31■□□□□ 0.68
CMTM3-215ENST00000568477 SLC39A6Q13433 755 aa19.31■□□□□ 0.68
CMTM3-215ENST00000568477 PELP1Q8IZL8 1130 aaKnown RBP19.31■□□□□ 0.68
CMTM3-215ENST00000568477 MYH14Q7Z406 1995 aaKnown RBP19.3■□□□□ 0.68
CMTM3-215ENST00000568477 RFC4P35249 363 aa19.3■□□□□ 0.68
CMTM3-215ENST00000568477 TEFQ10587 303 aa19.3■□□□□ 0.68
CMTM3-215ENST00000568477 ARHGEF1Q92888 912 aaKnown RBP19.3■□□□□ 0.68
CMTM3-215ENST00000568477 DNAJC10Q8IXB1 793 aa19.29■□□□□ 0.68
CMTM3-215ENST00000568477 PHACTR3Q96KR7 559 aa19.29■□□□□ 0.68
CMTM3-215ENST00000568477 FCHSD2O94868 740 aa19.28■□□□□ 0.68
CMTM3-215ENST00000568477 MMP10P09238 476 aa19.28■□□□□ 0.68
CMTM3-215ENST00000568477 NLGN1Q8N2Q7 840 aa19.28■□□□□ 0.68
CMTM3-215ENST00000568477 IL17REQ8NFR9 667 aa19.28■□□□□ 0.68
CMTM3-215ENST00000568477 KCPQ6ZWJ8 1503 aa19.28■□□□□ 0.68
CMTM3-215ENST00000568477 TTC5Q8N0Z6 440 aa19.27■□□□□ 0.68
CMTM3-215ENST00000568477 CCDC87Q9NVE4 849 aa19.27■□□□□ 0.68
CMTM3-215ENST00000568477 INTS5Q6P9B9 1019 aaKnown RBP19.26■□□□□ 0.67
CMTM3-215ENST00000568477 VSIG10Q8N0Z9 540 aa19.26■□□□□ 0.67
CMTM3-215ENST00000568477 CEMIPQ8WUJ3 1361 aa19.25■□□□□ 0.67
CMTM3-215ENST00000568477 CYP19A1P11511 503 aaPredicted RBP19.25■□□□□ 0.67
CMTM3-215ENST00000568477 GYS1P13807 737 aa19.25■□□□□ 0.67
CMTM3-215ENST00000568477 C4AP0C0L4 1744 aa19.25■□□□□ 0.67
CMTM3-215ENST00000568477 CHD4Q14839 1912 aa19.24■□□□□ 0.67
CMTM3-215ENST00000568477 UBR2Q8IWV8 1755 aa19.24■□□□□ 0.67
CMTM3-215ENST00000568477 UTRNP46939 3433 aa19.23■□□□□ 0.67
CMTM3-215ENST00000568477 GRIN3BO60391 1043 aa19.23■□□□□ 0.67
CMTM3-215ENST00000568477 YBX3P16989 372 aaKnown RBP eCLIP19.23■□□□□ 0.671e-6■■□□□ 12.5
CMTM3-215ENST00000568477 RTF1Q92541 710 aaKnown RBP19.23■□□□□ 0.67
CMTM3-215ENST00000568477 SOS1Q07889 1333 aaPredicted RBP19.23■□□□□ 0.67
CMTM3-215ENST00000568477 USP42Q9H9J4 1324 aaKnown RBP19.23■□□□□ 0.67
CMTM3-215ENST00000568477 ZNF790Q6PG37 636 aa19.22■□□□□ 0.67
CMTM3-215ENST00000568477 SRP68Q9UHB9 627 aaKnown RBP19.22■□□□□ 0.67
CMTM3-215ENST00000568477 SIPA1L3O60292 1781 aaPredicted RBP19.21■□□□□ 0.67
CMTM3-215ENST00000568477 NEFMP07197 916 aa19.21■□□□□ 0.67
CMTM3-215ENST00000568477 DDX10Q13206 875 aaKnown RBP19.21■□□□□ 0.67
CMTM3-215ENST00000568477 ZNF496Q96IT1 587 aaPredicted RBP19.21■□□□□ 0.67
CMTM3-215ENST00000568477 PARP3Q9Y6F1 533 aa19.21■□□□□ 0.67
CMTM3-215ENST00000568477 STARD3NLO95772 234 aa19.2■□□□□ 0.66
CMTM3-215ENST00000568477 RALBP1Q15311 655 aa19.2■□□□□ 0.66
CMTM3-215ENST00000568477 ZBTB1Q9Y2K1 713 aa19.2■□□□□ 0.66
CMTM3-215ENST00000568477 HEG1Q9ULI3 1381 aa19.19■□□□□ 0.66
CMTM3-215ENST00000568477 BTBD11A6QL63 1104 aa19.19■□□□□ 0.66
CMTM3-215ENST00000568477 ZPR1O75312 459 aa19.19■□□□□ 0.66
CMTM3-215ENST00000568477 FKBP8Q14318 412 aa19.19■□□□□ 0.66
CMTM3-215ENST00000568477 FMNL2Q96PY5 1086 aa19.19■□□□□ 0.66
CMTM3-215ENST00000568477 COL15A1P39059 1388 aa19.19■□□□□ 0.66
CMTM3-215ENST00000568477 C10orf71Q711Q0 1435 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms