RNA–Protein interactions for RNA: ENST00000568423.5

SCAMP5-218, Transcript of secretory carrier membrane protein 5, humanhuman

TSL 3

Gene SCAMP5, Length 1,142 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP5-218ENST00000568423 ZNF530Q6P9A1 599 aaPredicted RBP23.95■■□□□ 1.42
SCAMP5-218ENST00000568423 ERVV-2B6SEH9 535 aa23.94■■□□□ 1.42
SCAMP5-218ENST00000568423 U2SURPO15042 1029 aaKnown RBP23.94■■□□□ 1.42
SCAMP5-218ENST00000568423 HMOX1P09601 288 aa23.94■■□□□ 1.42
SCAMP5-218ENST00000568423 C5P01031 1676 aa23.93■■□□□ 1.42
SCAMP5-218ENST00000568423 ASAP1Q9ULH1 1129 aa23.93■■□□□ 1.42
SCAMP5-218ENST00000568423 TUBGCP6Q96RT7 1819 aa23.93■■□□□ 1.42
SCAMP5-218ENST00000568423 ATP6V1AP38606 617 aa23.92■■□□□ 1.42
SCAMP5-218ENST00000568423 MAP3K5Q99683 1374 aa23.91■■□□□ 1.42
SCAMP5-218ENST00000568423 NUDCQ9Y266 331 aa23.91■■□□□ 1.42
SCAMP5-218ENST00000568423 ANP32CO43423 234 aa23.9■■□□□ 1.42
SCAMP5-218ENST00000568423 CABP4P57796 275 aa23.9■■□□□ 1.42
SCAMP5-218ENST00000568423 VIRMAQ69YN4 1812 aaKnown RBP23.89■■□□□ 1.42
SCAMP5-218ENST00000568423 RSPH6AQ9H0K4 717 aa23.89■■□□□ 1.41
SCAMP5-218ENST00000568423 ATG3Q9NT62 314 aa23.89■■□□□ 1.41
SCAMP5-218ENST00000568423 TAF1LQ8IZX4 1826 aa23.89■■□□□ 1.41
SCAMP5-218ENST00000568423 PHF14O94880 888 aa23.88■■□□□ 1.41
SCAMP5-218ENST00000568423 RBM42Q9BTD8 480 aaKnown RBP23.88■■□□□ 1.41
SCAMP5-218ENST00000568423 ADAMTS7Q9UKP4 1686 aa23.88■■□□□ 1.41
SCAMP5-218ENST00000568423 U2AF1L5P0DN76 240 aaPredicted RBP23.87■■□□□ 1.41
SCAMP5-218ENST00000568423 U2AF1Q01081 240 aaKnown RBP eCLIP23.87■■□□□ 1.41
SCAMP5-218ENST00000568423 GPR162Q16538 588 aa23.87■■□□□ 1.41
SCAMP5-218ENST00000568423 MSL1Q68DK7 614 aa23.87■■□□□ 1.41
SCAMP5-218ENST00000568423 SSFA2P28290 1259 aa23.86■■□□□ 1.41
SCAMP5-218ENST00000568423 C4BP0C0L5 1744 aa23.86■■□□□ 1.41
SCAMP5-218ENST00000568423 SCN11AQ9UI33 1791 aa23.86■■□□□ 1.41
SCAMP5-218ENST00000568423 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.85■■□□□ 1.41
SCAMP5-218ENST00000568423 LINC00116Q8NCU8 138 aa23.85■■□□□ 1.41
SCAMP5-218ENST00000568423 GNPATO15228 680 aa23.84■■□□□ 1.41
SCAMP5-218ENST00000568423 PRKAR2BP31323 418 aa23.84■■□□□ 1.41
SCAMP5-218ENST00000568423 PELP1Q8IZL8 1130 aaKnown RBP23.84■■□□□ 1.41
SCAMP5-218ENST00000568423 KDM6AO15550 1401 aaPredicted RBP23.84■■□□□ 1.41
SCAMP5-218ENST00000568423 COL24A1Q17RW2 1714 aa23.83■■□□□ 1.41
SCAMP5-218ENST00000568423 ITPK1Q13572 414 aa23.82■■□□□ 1.4
SCAMP5-218ENST00000568423 CCDC184Q52MB2 194 aa23.82■■□□□ 1.4
SCAMP5-218ENST00000568423 AKAP4Q5JQC9 854 aa23.82■■□□□ 1.4
SCAMP5-218ENST00000568423 FCHSD2O94868 740 aa23.81■■□□□ 1.4
SCAMP5-218ENST00000568423 NFATC2IPQ8NCF5 419 aa23.81■■□□□ 1.4
SCAMP5-218ENST00000568423 DLG5Q8TDM6 1919 aa23.8■■□□□ 1.4
SCAMP5-218ENST00000568423 UTRNP46939 3433 aa23.8■■□□□ 1.4
SCAMP5-218ENST00000568423 RTCBQ9Y3I0 505 aaKnown RBP23.8■■□□□ 1.4
SCAMP5-218ENST00000568423 MRC1P22897 1456 aa23.8■■□□□ 1.4
SCAMP5-218ENST00000568423 MTHFSDQ2M296 383 aaKnown RBP23.79■■□□□ 1.4
SCAMP5-218ENST00000568423 PTCD1O75127 700 aaKnown RBP23.78■■□□□ 1.4
SCAMP5-218ENST00000568423 TRAPPC3LQ5T215 181 aa23.78■■□□□ 1.4
SCAMP5-218ENST00000568423 PHACTR3Q96KR7 559 aa23.78■■□□□ 1.4
SCAMP5-218ENST00000568423 CD2APQ9Y5K6 639 aa23.78■■□□□ 1.4
SCAMP5-218ENST00000568423 UBR3Q6ZT12 1888 aa23.78■■□□□ 1.4
SCAMP5-218ENST00000568423 RC3H1Q5TC82 1133 aaKnown RBP23.77■■□□□ 1.4
SCAMP5-218ENST00000568423 SMIM5Q71RC9 77 aa23.77■■□□□ 1.4
SCAMP5-218ENST00000568423 NLGN2Q8NFZ4 835 aa23.77■■□□□ 1.4
SCAMP5-218ENST00000568423 AMIGO3Q86WK7 504 aa23.76■■□□□ 1.39
SCAMP5-218ENST00000568423 PLEKHF1Q96S99 279 aa23.76■■□□□ 1.39
SCAMP5-218ENST00000568423 SIPA1L3O60292 1781 aaPredicted RBP23.75■■□□□ 1.39
SCAMP5-218ENST00000568423 WDR43Q15061 677 aaKnown RBP eCLIP23.75■■□□□ 1.39
SCAMP5-218ENST00000568423 GRIN3BO60391 1043 aa23.74■■□□□ 1.39
SCAMP5-218ENST00000568423 GAS2L2Q8NHY3 880 aa23.74■■□□□ 1.39
SCAMP5-218ENST00000568423 SLC4A9Q96Q91 983 aa23.74■■□□□ 1.39
SCAMP5-218ENST00000568423 ADRA2BP18089 450 aa23.73■■□□□ 1.39
SCAMP5-218ENST00000568423 SLC52A2Q9HAB3 445 aa23.73■■□□□ 1.39
SCAMP5-218ENST00000568423 MRS2Q9HD23 443 aa23.73■■□□□ 1.39
SCAMP5-218ENST00000568423 CNTNAP4Q9C0A0 1308 aa23.73■■□□□ 1.39
SCAMP5-218ENST00000568423 CHD4Q14839 1912 aa23.72■■□□□ 1.39
SCAMP5-218ENST00000568423 RPS6KA4O75676 772 aa23.72■■□□□ 1.39
SCAMP5-218ENST00000568423 RFC4P35249 363 aa23.72■■□□□ 1.39
SCAMP5-218ENST00000568423 DIEXFQ68CQ4 756 aaKnown RBP23.72■■□□□ 1.39
SCAMP5-218ENST00000568423 ZNF831Q5JPB2 1677 aa23.71■■□□□ 1.39
SCAMP5-218ENST00000568423 RNMTO43148 476 aaKnown RBP23.71■■□□□ 1.39
SCAMP5-218ENST00000568423 NLGN1Q8N2Q7 840 aa23.71■■□□□ 1.39
SCAMP5-218ENST00000568423 LGR6Q9HBX8 967 aa23.71■■□□□ 1.39
SCAMP5-218ENST00000568423 ADAMTS8Q9UP79 889 aa23.71■■□□□ 1.39
SCAMP5-218ENST00000568423 ARHGEF1Q92888 912 aaKnown RBP23.69■■□□□ 1.38
SCAMP5-218ENST00000568423 MAPK8IP3Q9UPT6 1336 aa23.68■■□□□ 1.38
SCAMP5-218ENST00000568423 CEMIPQ8WUJ3 1361 aa23.67■■□□□ 1.38
SCAMP5-218ENST00000568423 MMP10P09238 476 aa23.67■■□□□ 1.38
SCAMP5-218ENST00000568423 CRKLP46109 303 aaKnown RBP23.67■■□□□ 1.38
SCAMP5-218ENST00000568423 PNISRQ8TF01 805 aaKnown RBP23.67■■□□□ 1.38
SCAMP5-218ENST00000568423 PNNQ9H307 717 aaKnown RBP23.67■■□□□ 1.38
SCAMP5-218ENST00000568423 GOLGB1Q14789 3259 aaKnown RBP23.66■■□□□ 1.38
SCAMP5-218ENST00000568423 GNAT3A8MTJ3 354 aa23.66■■□□□ 1.38
SCAMP5-218ENST00000568423 CCDC146Q8IYE0 955 aa23.66■■□□□ 1.38
SCAMP5-218ENST00000568423 ZNF784Q8NCA9 323 aaPredicted RBP23.66■■□□□ 1.38
SCAMP5-218ENST00000568423 UBR2Q8IWV8 1755 aa23.65■■□□□ 1.38
SCAMP5-218ENST00000568423 NFE2L2Q16236 605 aa23.65■■□□□ 1.38
SCAMP5-218ENST00000568423 CICQ96RK0 1608 aaPredicted RBP23.64■■□□□ 1.38
SCAMP5-218ENST00000568423 NEFMP07197 916 aa23.64■■□□□ 1.37
SCAMP5-218ENST00000568423 YBX3P16989 372 aaKnown RBP eCLIP23.64■■□□□ 1.37
SCAMP5-218ENST00000568423 TEFQ10587 303 aa23.64■■□□□ 1.37
SCAMP5-218ENST00000568423 SLC39A6Q13433 755 aa23.64■■□□□ 1.37
SCAMP5-218ENST00000568423 COL5A3P25940 1745 aaPredicted RBP23.64■■□□□ 1.37
SCAMP5-218ENST00000568423 TTC5Q8N0Z6 440 aa23.63■■□□□ 1.37
SCAMP5-218ENST00000568423 RUNDC1Q96C34 613 aa23.63■■□□□ 1.37
SCAMP5-218ENST00000568423 PARP3Q9Y6F1 533 aa23.63■■□□□ 1.37
SCAMP5-218ENST00000568423 GYS1P13807 737 aa23.61■■□□□ 1.37
SCAMP5-218ENST00000568423 DNAJC10Q8IXB1 793 aa23.61■■□□□ 1.37
SCAMP5-218ENST00000568423 IL17REQ8NFR9 667 aa23.61■■□□□ 1.37
SCAMP5-218ENST00000568423 CCDC87Q9NVE4 849 aa23.61■■□□□ 1.37
SCAMP5-218ENST00000568423 MYH14Q7Z406 1995 aaKnown RBP23.6■■□□□ 1.37
SCAMP5-218ENST00000568423 KCPQ6ZWJ8 1503 aa23.59■■□□□ 1.37
SCAMP5-218ENST00000568423 CCER2I3L3R5 266 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms