RNA–Protein interactions for RNA: ENST00000568328.5

VWA3A-208, Transcript of von Willebrand factor A domain containing 3A, humanhuman

TSL 1 (best)

Gene VWA3A, Length 2,336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VWA3A-208ENST00000568328 ERVV-2B6SEH9 535 aa13.58□□□□□ -0.23
VWA3A-208ENST00000568328 PPM1GO15355 546 aaPredicted RBP13.58□□□□□ -0.23
VWA3A-208ENST00000568328 EYA1Q99502 592 aa13.58□□□□□ -0.23
VWA3A-208ENST00000568328 KLHL34Q8N239 644 aa13.58□□□□□ -0.24
VWA3A-208ENST00000568328 ZBED9Q6R2W3 1325 aa13.58□□□□□ -0.24
VWA3A-208ENST00000568328 PHKG2P15735 406 aa13.57□□□□□ -0.24
VWA3A-208ENST00000568328 ANP32AP39687 249 aaKnown RBP13.57□□□□□ -0.24
VWA3A-208ENST00000568328 PIGBQ92521 554 aa13.57□□□□□ -0.24
VWA3A-208ENST00000568328 IGSF1Q8N6C5 1336 aa13.56□□□□□ -0.24
VWA3A-208ENST00000568328 LOC102724428A0A0B4J2F2 783 aa13.56□□□□□ -0.24
VWA3A-208ENST00000568328 ADRA2BP18089 450 aa13.56□□□□□ -0.24
VWA3A-208ENST00000568328 SIK1P57059 783 aa13.56□□□□□ -0.24
VWA3A-208ENST00000568328 EIF4A2Q14240 407 aaKnown RBP13.56□□□□□ -0.24
VWA3A-208ENST00000568328 RC3H1Q5TC82 1133 aaKnown RBP13.55□□□□□ -0.24
VWA3A-208ENST00000568328 DCAF5Q96JK2 942 aa13.55□□□□□ -0.24
VWA3A-208ENST00000568328 IPO9Q96P70 1041 aaKnown RBP13.55□□□□□ -0.24
VWA3A-208ENST00000568328 UBR3Q6ZT12 1888 aa13.55□□□□□ -0.24
VWA3A-208ENST00000568328 HSPA5P11021 654 aaKnown RBP13.55□□□□□ -0.24
VWA3A-208ENST00000568328 MORC1Q86VD1 984 aa13.54□□□□□ -0.24
VWA3A-208ENST00000568328 POLR3GLQ9BT43 218 aa13.54□□□□□ -0.24
VWA3A-208ENST00000568328 KCNQ4P56696 695 aa13.53□□□□□ -0.24
VWA3A-208ENST00000568328 PANK3Q9H999 370 aa13.53□□□□□ -0.24
VWA3A-208ENST00000568328 KNSTRNQ9Y448 316 aa13.53□□□□□ -0.24
VWA3A-208ENST00000568328 C1orf141Q5JVX7 400 aa13.52□□□□□ -0.24
VWA3A-208ENST00000568328 CNTNAP4Q9C0A0 1308 aa13.52□□□□□ -0.25
VWA3A-208ENST00000568328 GIGYF1O75420 1035 aaPredicted RBP13.52□□□□□ -0.25
VWA3A-208ENST00000568328 ATP6V1AP38606 617 aa13.52□□□□□ -0.25
VWA3A-208ENST00000568328 IRX6P78412 446 aaPredicted RBP13.52□□□□□ -0.25
VWA3A-208ENST00000568328 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.51□□□□□ -0.25
VWA3A-208ENST00000568328 C1QTNF8P60827 252 aa13.51□□□□□ -0.25
VWA3A-208ENST00000568328 NLGN2Q8NFZ4 835 aa13.51□□□□□ -0.25
VWA3A-208ENST00000568328 KDRP35968 1356 aa13.51□□□□□ -0.25
VWA3A-208ENST00000568328 CICQ96RK0 1608 aaPredicted RBP13.51□□□□□ -0.25
VWA3A-208ENST00000568328 MSL1Q68DK7 614 aa13.51□□□□□ -0.25
VWA3A-208ENST00000568328 LINC00116Q8NCU8 138 aa13.51□□□□□ -0.25
VWA3A-208ENST00000568328 RTCBQ9Y3I0 505 aaKnown RBP13.51□□□□□ -0.25
VWA3A-208ENST00000568328 CABP4P57796 275 aa13.5□□□□□ -0.25
VWA3A-208ENST00000568328 ZNF530Q6P9A1 599 aaPredicted RBP13.5□□□□□ -0.25
VWA3A-208ENST00000568328 NLGN1Q8N2Q7 840 aa13.5□□□□□ -0.25
VWA3A-208ENST00000568328 ATG3Q9NT62 314 aa13.5□□□□□ -0.25
VWA3A-208ENST00000568328 ZBTB47Q9UFB7 747 aaPredicted RBP13.5□□□□□ -0.25
VWA3A-208ENST00000568328 GNPATO15228 680 aa13.5□□□□□ -0.25
VWA3A-208ENST00000568328 TRAPPC3LQ5T215 181 aa13.49□□□□□ -0.25
VWA3A-208ENST00000568328 TGFB2P61812 414 aa13.48□□□□□ -0.25
VWA3A-208ENST00000568328 NBR1Q14596 966 aa13.48□□□□□ -0.25
VWA3A-208ENST00000568328 CCDC87Q9NVE4 849 aa13.48□□□□□ -0.25
VWA3A-208ENST00000568328 ASAP1Q9ULH1 1129 aa13.48□□□□□ -0.25
VWA3A-208ENST00000568328 COL5A3P25940 1745 aaPredicted RBP13.48□□□□□ -0.25
VWA3A-208ENST00000568328 PHF14O94880 888 aa13.47□□□□□ -0.25
VWA3A-208ENST00000568328 RNF123Q5XPI4 1314 aa13.47□□□□□ -0.25
VWA3A-208ENST00000568328 RPS6KA4O75676 772 aa13.47□□□□□ -0.25
VWA3A-208ENST00000568328 YBX3P16989 372 aaKnown RBP eCLIP13.47□□□□□ -0.25
VWA3A-208ENST00000568328 TNNT2P45379 298 aaPredicted RBP13.47□□□□□ -0.25
VWA3A-208ENST00000568328 MTHFSP49914 203 aa13.47□□□□□ -0.25
VWA3A-208ENST00000568328 B4GALNT3Q6L9W6 998 aa13.47□□□□□ -0.25
VWA3A-208ENST00000568328 KIF13BQ9NQT8 1826 aa13.47□□□□□ -0.25
VWA3A-208ENST00000568328 ITPK1Q13572 414 aa13.46□□□□□ -0.25
VWA3A-208ENST00000568328 AKAP4Q5JQC9 854 aa13.46□□□□□ -0.26
VWA3A-208ENST00000568328 RBM42Q9BTD8 480 aaKnown RBP13.45□□□□□ -0.26
VWA3A-208ENST00000568328 NPC1L1Q9UHC9 1359 aa13.45□□□□□ -0.26
VWA3A-208ENST00000568328 RFC4P35249 363 aa13.45□□□□□ -0.26
VWA3A-208ENST00000568328 UBE2Q2Q8WVN8 375 aa13.45□□□□□ -0.26
VWA3A-208ENST00000568328 PARP3Q9Y6F1 533 aa13.45□□□□□ -0.26
VWA3A-208ENST00000568328 KDM6AO15550 1401 aaPredicted RBP13.44□□□□□ -0.26
VWA3A-208ENST00000568328 ATP10DQ9P241 1426 aa13.44□□□□□ -0.26
VWA3A-208ENST00000568328 SENP3-EIF4A1A0A087X0R7 540 aa13.44□□□□□ -0.26
VWA3A-208ENST00000568328 IL13P35225 146 aa13.44□□□□□ -0.26
VWA3A-208ENST00000568328 C4AP0C0L4 1744 aa13.44□□□□□ -0.26
VWA3A-208ENST00000568328 ADCY9O60503 1353 aa13.44□□□□□ -0.26
VWA3A-208ENST00000568328 C10orf71Q711Q0 1435 aa13.44□□□□□ -0.26
VWA3A-208ENST00000568328 SCN11AQ9UI33 1791 aa13.43□□□□□ -0.26
VWA3A-208ENST00000568328 MRC1P22897 1456 aa13.43□□□□□ -0.26
VWA3A-208ENST00000568328 MMP10P09238 476 aa13.42□□□□□ -0.26
VWA3A-208ENST00000568328 SULT6B1Q6IMI4 303 aa13.42□□□□□ -0.26
VWA3A-208ENST00000568328 SALL2Q9Y467 1007 aaPredicted RBP13.42□□□□□ -0.26
VWA3A-208ENST00000568328 AMER1Q5JTC6 1135 aaPredicted RBP13.41□□□□□ -0.26
VWA3A-208ENST00000568328 PRKRIP1Q9H875 184 aaPredicted RBP13.41□□□□□ -0.26
VWA3A-208ENST00000568328 GPBP1L1Q9HC44 474 aaPredicted RBP13.41□□□□□ -0.26
VWA3A-208ENST00000568328 ARHGEF1Q92888 912 aaKnown RBP13.4□□□□□ -0.26
VWA3A-208ENST00000568328 PXDNLA1KZ92 1463 aa13.4□□□□□ -0.26
VWA3A-208ENST00000568328 VSIG10Q8N0Z9 540 aa13.4□□□□□ -0.26
VWA3A-208ENST00000568328 TJP1Q07157 1748 aa13.4□□□□□ -0.26
VWA3A-208ENST00000568328 DIAPH1O60610 1272 aaKnown RBP13.39□□□□□ -0.27
VWA3A-208ENST00000568328 CCDC136Q96JN2 1154 aa13.39□□□□□ -0.27
VWA3A-208ENST00000568328 SLC52A2Q9HAB3 445 aa13.39□□□□□ -0.27
VWA3A-208ENST00000568328 ADAMTS7Q9UKP4 1686 aa13.39□□□□□ -0.27
VWA3A-208ENST00000568328 KIF7Q2M1P5 1343 aa13.39□□□□□ -0.27
VWA3A-208ENST00000568328 GYS1P13807 737 aa13.39□□□□□ -0.27
VWA3A-208ENST00000568328 KIAA1551Q9HCM1 1747 aa13.38□□□□□ -0.27
VWA3A-208ENST00000568328 A0A087WZG4 1122 aa13.38□□□□□ -0.27
VWA3A-208ENST00000568328 CRKLP46109 303 aaKnown RBP13.38□□□□□ -0.27
VWA3A-208ENST00000568328 AMIGO3Q86WK7 504 aa13.38□□□□□ -0.27
VWA3A-208ENST00000568328 MRS2Q9HD23 443 aa13.38□□□□□ -0.27
VWA3A-208ENST00000568328 NUDCQ9Y266 331 aa13.38□□□□□ -0.27
VWA3A-208ENST00000568328 RNMTO43148 476 aaKnown RBP13.38□□□□□ -0.27
VWA3A-208ENST00000568328 AEBP1Q8IUX7 1158 aa13.38□□□□□ -0.27
VWA3A-208ENST00000568328 NFATC2IPQ8NCF5 419 aa13.38□□□□□ -0.27
VWA3A-208ENST00000568328 SLC4A9Q96Q91 983 aa13.38□□□□□ -0.27
VWA3A-208ENST00000568328 PDZRN3Q9UPQ7 1066 aa13.38□□□□□ -0.27
VWA3A-208ENST00000568328 USP42Q9H9J4 1324 aaKnown RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms