RNA–Protein interactions for RNA: ENST00000567712.1

CNEP1R1-209, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 4

Gene CNEP1R1, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-209ENST00000567712 ATP10DQ9P241 1426 aa31.63■■■□□ 2.65
CNEP1R1-209ENST00000567712 PANK3Q9H999 370 aa31.62■■■□□ 2.65
CNEP1R1-209ENST00000567712 KDRP35968 1356 aa31.61■■■□□ 2.65
CNEP1R1-209ENST00000567712 HSPA5P11021 654 aaKnown RBP31.6■■■□□ 2.65
CNEP1R1-209ENST00000567712 CLSPNQ9HAW4 1339 aa31.59■■■□□ 2.65
CNEP1R1-209ENST00000567712 COL5A3P25940 1745 aaPredicted RBP31.58■■■□□ 2.65
CNEP1R1-209ENST00000567712 MYH14Q7Z406 1995 aaKnown RBP31.57■■■□□ 2.65
CNEP1R1-209ENST00000567712 ADCY9O60503 1353 aa31.57■■■□□ 2.64
CNEP1R1-209ENST00000567712 KIAA1551Q9HCM1 1747 aa31.57■■■□□ 2.64
CNEP1R1-209ENST00000567712 KDM6AO15550 1401 aaPredicted RBP31.57■■■□□ 2.64
CNEP1R1-209ENST00000567712 CEP350Q5VT06 3117 aa31.56■■■□□ 2.64
CNEP1R1-209ENST00000567712 KIF13BQ9NQT8 1826 aa31.56■■■□□ 2.64
CNEP1R1-209ENST00000567712 ZNF831Q5JPB2 1677 aa31.55■■■□□ 2.64
CNEP1R1-209ENST00000567712 N4BP2Q86UW6 1770 aaPredicted RBP31.54■■■□□ 2.64
CNEP1R1-209ENST00000567712 AEBP1Q8IUX7 1158 aa31.54■■■□□ 2.64
CNEP1R1-209ENST00000567712 ERVV-2B6SEH9 535 aa31.53■■■□□ 2.64
CNEP1R1-209ENST00000567712 EIF4G2P78344 907 aaKnown RBP eCLIP31.53■■■□□ 2.64
CNEP1R1-209ENST00000567712 PLEKHG2Q9H7P9 1386 aa31.53■■■□□ 2.64
CNEP1R1-209ENST00000567712 MMP10P09238 476 aa31.52■■■□□ 2.64
CNEP1R1-209ENST00000567712 RBM42Q9BTD8 480 aaKnown RBP31.52■■■□□ 2.64
CNEP1R1-209ENST00000567712 DCAF5Q96JK2 942 aa31.5■■■□□ 2.63
CNEP1R1-209ENST00000567712 CICQ96RK0 1608 aaPredicted RBP31.49■■■□□ 2.63
CNEP1R1-209ENST00000567712 PLEKHO1Q53GL0 409 aaPredicted RBP31.49■■■□□ 2.63
CNEP1R1-209ENST00000567712 ZNF530Q6P9A1 599 aaPredicted RBP31.49■■■□□ 2.63
CNEP1R1-209ENST00000567712 ZNF526Q8TF50 670 aaPredicted RBP31.49■■■□□ 2.63
CNEP1R1-209ENST00000567712 C4AP0C0L4 1744 aa31.49■■■□□ 2.63
CNEP1R1-209ENST00000567712 PXDNLA1KZ92 1463 aa31.48■■■□□ 2.63
CNEP1R1-209ENST00000567712 TRAPPC3LQ5T215 181 aa31.48■■■□□ 2.63
CNEP1R1-209ENST00000567712 ARHGEF1Q92888 912 aaKnown RBP31.48■■■□□ 2.63
CNEP1R1-209ENST00000567712 RTCBQ9Y3I0 505 aaKnown RBP31.48■■■□□ 2.63
CNEP1R1-209ENST00000567712 GPBP1L1Q9HC44 474 aaPredicted RBP31.47■■■□□ 2.63
CNEP1R1-209ENST00000567712 HSP90AB1P08238 724 aaKnown RBP31.45■■■□□ 2.63
CNEP1R1-209ENST00000567712 RC3H1Q5TC82 1133 aaKnown RBP31.45■■■□□ 2.63
CNEP1R1-209ENST00000567712 CABP4P57796 275 aa31.44■■■□□ 2.62
CNEP1R1-209ENST00000567712 MORC1Q86VD1 984 aa31.44■■■□□ 2.62
CNEP1R1-209ENST00000567712 CNTNAP4Q9C0A0 1308 aa31.44■■■□□ 2.62
CNEP1R1-209ENST00000567712 RPS6KA4O75676 772 aa31.42■■■□□ 2.62
CNEP1R1-209ENST00000567712 GYS1P13807 737 aa31.42■■■□□ 2.62
CNEP1R1-209ENST00000567712 AMOTQ4VCS5 1084 aa31.42■■■□□ 2.62
CNEP1R1-209ENST00000567712 SCN11AQ9UI33 1791 aa31.42■■■□□ 2.62
CNEP1R1-209ENST00000567712 BRCA1P38398 1863 aaKnown RBP31.42■■■□□ 2.62
CNEP1R1-209ENST00000567712 C10orf71Q711Q0 1435 aa31.41■■■□□ 2.62
CNEP1R1-209ENST00000567712 TJP1Q07157 1748 aa31.41■■■□□ 2.62
CNEP1R1-209ENST00000567712 A0A0G2JLW4 131 aa31.41■■■□□ 2.62
CNEP1R1-209ENST00000567712 MTHFSP49914 203 aa31.41■■■□□ 2.62
CNEP1R1-209ENST00000567712 SULT6B1Q6IMI4 303 aa31.41■■■□□ 2.62
CNEP1R1-209ENST00000567712 PTCD1O75127 700 aaKnown RBP31.4■■■□□ 2.62
CNEP1R1-209ENST00000567712 IL13P35225 146 aa31.4■■■□□ 2.62
CNEP1R1-209ENST00000567712 NLGN1Q8N2Q7 840 aa31.4■■■□□ 2.62
CNEP1R1-209ENST00000567712 NFATC2IPQ8NCF5 419 aa31.4■■■□□ 2.62
CNEP1R1-209ENST00000567712 VIRMAQ69YN4 1812 aaKnown RBP31.38■■■□□ 2.61
CNEP1R1-209ENST00000567712 ADRA2BP18089 450 aa31.38■■■□□ 2.61
CNEP1R1-209ENST00000567712 RFC4P35249 363 aa31.36■■■□□ 2.61
CNEP1R1-209ENST00000567712 TGFB2P61812 414 aa31.36■■■□□ 2.61
CNEP1R1-209ENST00000567712 DPEP1P16444 411 aa31.35■■■□□ 2.61
CNEP1R1-209ENST00000567712 CRKLP46109 303 aaKnown RBP31.35■■■□□ 2.61
CNEP1R1-209ENST00000567712 C1orf141Q5JVX7 400 aa31.35■■■□□ 2.61
CNEP1R1-209ENST00000567712 SRP68Q9UHB9 627 aaKnown RBP31.35■■■□□ 2.61
CNEP1R1-209ENST00000567712 BCS1LQ9Y276 419 aa31.35■■■□□ 2.61
CNEP1R1-209ENST00000567712 ADAMTS7Q9UKP4 1686 aa31.35■■■□□ 2.61
CNEP1R1-209ENST00000567712 KIF3CO14782 793 aa31.33■■■□□ 2.61
CNEP1R1-209ENST00000567712 AMER1Q5JTC6 1135 aaPredicted RBP31.33■■■□□ 2.61
CNEP1R1-209ENST00000567712 KNSTRNQ9Y448 316 aa31.33■■■□□ 2.61
CNEP1R1-209ENST00000567712 KCNA3P22001 575 aa31.31■■■□□ 2.6
CNEP1R1-209ENST00000567712 CCDC87Q9NVE4 849 aa31.31■■■□□ 2.6
CNEP1R1-209ENST00000567712 FKBP8Q14318 412 aa31.3■■■□□ 2.6
CNEP1R1-209ENST00000567712 LGR6Q9HBX8 967 aa31.3■■■□□ 2.6
CNEP1R1-209ENST00000567712 PARP3Q9Y6F1 533 aa31.3■■■□□ 2.6
CNEP1R1-209ENST00000567712 INTS5Q6P9B9 1019 aaKnown RBP31.29■■■□□ 2.6
CNEP1R1-209ENST00000567712 ARFGEF1Q9Y6D6 1849 aa31.28■■■□□ 2.6
CNEP1R1-209ENST00000567712 HSPA6P17066 643 aa31.28■■■□□ 2.6
CNEP1R1-209ENST00000567712 DDR1Q08345 913 aa31.28■■■□□ 2.6
CNEP1R1-209ENST00000567712 CCER1Q8TC90 406 aaPredicted RBP31.27■■■□□ 2.6
CNEP1R1-209ENST00000567712 USP42Q9H9J4 1324 aaKnown RBP31.26■■■□□ 2.6
CNEP1R1-209ENST00000567712 ARHGAP27Q6ZUM4 889 aa31.26■■■□□ 2.59
CNEP1R1-209ENST00000567712 KIF7Q2M1P5 1343 aa31.25■■■□□ 2.59
CNEP1R1-209ENST00000567712 FCHSD2O94868 740 aa31.25■■■□□ 2.59
CNEP1R1-209ENST00000567712 AKAP4Q5JQC9 854 aa31.25■■■□□ 2.59
CNEP1R1-209ENST00000567712 DNAJC10Q8IXB1 793 aa31.25■■■□□ 2.59
CNEP1R1-209ENST00000567712 HMOX1P09601 288 aa31.24■■■□□ 2.59
CNEP1R1-209ENST00000567712 SLC39A6Q13433 755 aa31.23■■■□□ 2.59
CNEP1R1-209ENST00000567712 SLC52A2Q9HAB3 445 aa31.23■■■□□ 2.59
CNEP1R1-209ENST00000567712 MRC1P22897 1456 aa31.21■■■□□ 2.59
CNEP1R1-209ENST00000567712 RNMTO43148 476 aaKnown RBP31.21■■■□□ 2.59
CNEP1R1-209ENST00000567712 KCPQ6ZWJ8 1503 aa31.2■■■□□ 2.59
CNEP1R1-209ENST00000567712 AFDNP55196 1824 aaKnown RBP31.2■■■□□ 2.59
CNEP1R1-209ENST00000567712 PER1O15534 1290 aaPredicted RBP31.2■■■□□ 2.59
CNEP1R1-209ENST00000567712 TM4SF1P30408 202 aa31.19■■■□□ 2.58
CNEP1R1-209ENST00000567712 POLRMTO00411 1230 aaKnown RBP31.18■■■□□ 2.58
CNEP1R1-209ENST00000567712 CHRNA5P30532 468 aa31.18■■■□□ 2.58
CNEP1R1-209ENST00000567712 MTHFSDQ2M296 383 aaKnown RBP31.18■■■□□ 2.58
CNEP1R1-209ENST00000567712 SOS1Q07889 1333 aaPredicted RBP31.18■■■□□ 2.58
CNEP1R1-209ENST00000567712 SBF1O95248 1867 aa31.17■■■□□ 2.58
CNEP1R1-209ENST00000567712 CYP19A1P11511 503 aaPredicted RBP31.17■■■□□ 2.58
CNEP1R1-209ENST00000567712 USPL1Q5W0Q7 1092 aa31.17■■■□□ 2.58
CNEP1R1-209ENST00000567712 NMRK2Q9NPI5 230 aa31.17■■■□□ 2.58
CNEP1R1-209ENST00000567712 PIM2Q9P1W9 311 aa31.16■■■□□ 2.58
CNEP1R1-209ENST00000567712 CC2D1BQ5T0F9 858 aaKnown RBP31.14■■■□□ 2.58
CNEP1R1-209ENST00000567712 C9orf131Q5VYM1 1079 aa31.14■■■□□ 2.58
CNEP1R1-209ENST00000567712 UBR2Q8IWV8 1755 aa31.14■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms