RNA–Protein interactions for RNA: ENST00000567643.1

POLR2M-208, Transcript of RNA polymerase II subunit M, humanhuman

TSL 4

Gene POLR2M, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2M-208ENST00000567643 MRC1P22897 1456 aa23.36■■□□□ 1.33
POLR2M-208ENST00000567643 UTRNP46939 3433 aa23.36■■□□□ 1.33
POLR2M-208ENST00000567643 C1orf141Q5JVX7 400 aa23.35■■□□□ 1.33
POLR2M-208ENST00000567643 COL23A1Q86Y22 540 aaPredicted RBP23.35■■□□□ 1.33
POLR2M-208ENST00000567643 AMIGO3Q86WK7 504 aa23.34■■□□□ 1.33
POLR2M-208ENST00000567643 LINC00116Q8NCU8 138 aa23.34■■□□□ 1.33
POLR2M-208ENST00000567643 UBR2Q8IWV8 1755 aa23.33■■□□□ 1.33
POLR2M-208ENST00000567643 ITPK1Q13572 414 aa23.33■■□□□ 1.33
POLR2M-208ENST00000567643 C4AP0C0L4 1744 aa23.33■■□□□ 1.32
POLR2M-208ENST00000567643 AKAP4Q5JQC9 854 aa23.32■■□□□ 1.32
POLR2M-208ENST00000567643 SLC4A9Q96Q91 983 aa23.32■■□□□ 1.32
POLR2M-208ENST00000567643 GOLGB1Q14789 3259 aaKnown RBP23.32■■□□□ 1.32
POLR2M-208ENST00000567643 HMGB2P26583 209 aaKnown RBP23.31■■□□□ 1.32
POLR2M-208ENST00000567643 PPP2R1AP30153 589 aa23.31■■□□□ 1.32
POLR2M-208ENST00000567643 CABP4P57796 275 aa23.31■■□□□ 1.32
POLR2M-208ENST00000567643 ARXQ96QS3 562 aa23.31■■□□□ 1.32
POLR2M-208ENST00000567643 FHDC1Q9C0D6 1143 aaPredicted RBP23.31■■□□□ 1.32
POLR2M-208ENST00000567643 MAP3K5Q99683 1374 aa23.3■■□□□ 1.32
POLR2M-208ENST00000567643 ATP6V1AP38606 617 aa23.3■■□□□ 1.32
POLR2M-208ENST00000567643 MTHFSDQ2M296 383 aaKnown RBP23.3■■□□□ 1.32
POLR2M-208ENST00000567643 AK7Q96M32 723 aa23.29■■□□□ 1.32
POLR2M-208ENST00000567643 SYT17Q9BSW7 474 aa23.29■■□□□ 1.32
POLR2M-208ENST00000567643 U2SURPO15042 1029 aaKnown RBP23.28■■□□□ 1.32
POLR2M-208ENST00000567643 NFATC2IPQ8NCF5 419 aa23.28■■□□□ 1.32
POLR2M-208ENST00000567643 DLG5Q8TDM6 1919 aa23.27■■□□□ 1.32
POLR2M-208ENST00000567643 SMIM5Q71RC9 77 aa23.27■■□□□ 1.32
POLR2M-208ENST00000567643 LGR6Q9HBX8 967 aa23.27■■□□□ 1.32
POLR2M-208ENST00000567643 CHD4Q14839 1912 aa23.27■■□□□ 1.32
POLR2M-208ENST00000567643 MSH5O43196 834 aa23.26■■□□□ 1.31
POLR2M-208ENST00000567643 FLAD1Q8NFF5 587 aa23.26■■□□□ 1.31
POLR2M-208ENST00000567643 KCPQ6ZWJ8 1503 aa23.25■■□□□ 1.31
POLR2M-208ENST00000567643 RNMTO43148 476 aaKnown RBP23.25■■□□□ 1.31
POLR2M-208ENST00000567643 POLD1P28340 1107 aa23.25■■□□□ 1.31
POLR2M-208ENST00000567643 CFAP53Q96M91 514 aa23.25■■□□□ 1.31
POLR2M-208ENST00000567643 RBM42Q9BTD8 480 aaKnown RBP23.25■■□□□ 1.31
POLR2M-208ENST00000567643 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.24■■□□□ 1.31
POLR2M-208ENST00000567643 SSFA2P28290 1259 aa23.24■■□□□ 1.31
POLR2M-208ENST00000567643 MSL1Q68DK7 614 aa23.24■■□□□ 1.31
POLR2M-208ENST00000567643 SLC52A2Q9HAB3 445 aa23.24■■□□□ 1.31
POLR2M-208ENST00000567643 PHF14O94880 888 aa23.23■■□□□ 1.31
POLR2M-208ENST00000567643 RSPH6AQ9H0K4 717 aa23.23■■□□□ 1.31
POLR2M-208ENST00000567643 GNPATO15228 680 aa23.22■■□□□ 1.31
POLR2M-208ENST00000567643 KIF13BQ9NQT8 1826 aa23.2■■□□□ 1.3
POLR2M-208ENST00000567643 CNTNAP4Q9C0A0 1308 aa23.2■■□□□ 1.3
POLR2M-208ENST00000567643 PTCD1O75127 700 aaKnown RBP23.2■■□□□ 1.3
POLR2M-208ENST00000567643 PRKAR2BP31323 418 aa23.19■■□□□ 1.3
POLR2M-208ENST00000567643 PHACTR3Q96KR7 559 aa23.19■■□□□ 1.3
POLR2M-208ENST00000567643 RC3H1Q5TC82 1133 aaKnown RBP23.18■■□□□ 1.3
POLR2M-208ENST00000567643 GAS2L2Q8NHY3 880 aa23.18■■□□□ 1.3
POLR2M-208ENST00000567643 NUDCQ9Y266 331 aa23.17■■□□□ 1.3
POLR2M-208ENST00000567643 SLC39A6Q13433 755 aa23.16■■□□□ 1.3
POLR2M-208ENST00000567643 KIAA1551Q9HCM1 1747 aa23.16■■□□□ 1.3
POLR2M-208ENST00000567643 GNAT3A8MTJ3 354 aa23.15■■□□□ 1.3
POLR2M-208ENST00000567643 U2AF1L5P0DN76 240 aaPredicted RBP23.15■■□□□ 1.3
POLR2M-208ENST00000567643 U2AF1Q01081 240 aaKnown RBP eCLIP23.15■■□□□ 1.3
POLR2M-208ENST00000567643 KLHL34Q8N239 644 aa23.15■■□□□ 1.3
POLR2M-208ENST00000567643 IL17REQ8NFR9 667 aa23.15■■□□□ 1.3
POLR2M-208ENST00000567643 NLGN2Q8NFZ4 835 aa23.15■■□□□ 1.3
POLR2M-208ENST00000567643 RTCBQ9Y3I0 505 aaKnown RBP23.15■■□□□ 1.3
POLR2M-208ENST00000567643 CEMIPQ8WUJ3 1361 aa23.14■■□□□ 1.3
POLR2M-208ENST00000567643 DCAF8L1A6NGE4 600 aa23.13■■□□□ 1.29
POLR2M-208ENST00000567643 CRKLP46109 303 aaKnown RBP23.13■■□□□ 1.29
POLR2M-208ENST00000567643 RPS6KA4O75676 772 aa23.12■■□□□ 1.29
POLR2M-208ENST00000567643 FCHSD2O94868 740 aa23.12■■□□□ 1.29
POLR2M-208ENST00000567643 ADRA2BP18089 450 aa23.11■■□□□ 1.29
POLR2M-208ENST00000567643 DDX10Q13206 875 aaKnown RBP23.11■■□□□ 1.29
POLR2M-208ENST00000567643 TRAPPC3LQ5T215 181 aa23.11■■□□□ 1.29
POLR2M-208ENST00000567643 DNAJC10Q8IXB1 793 aa23.11■■□□□ 1.29
POLR2M-208ENST00000567643 ARHGEF1Q92888 912 aaKnown RBP23.11■■□□□ 1.29
POLR2M-208ENST00000567643 N4BP2Q86UW6 1770 aaPredicted RBP23.1■■□□□ 1.29
POLR2M-208ENST00000567643 INTS5Q6P9B9 1019 aaKnown RBP23.09■■□□□ 1.29
POLR2M-208ENST00000567643 BRCA1P38398 1863 aaKnown RBP23.09■■□□□ 1.29
POLR2M-208ENST00000567643 AFDNP55196 1824 aaKnown RBP23.08■■□□□ 1.28
POLR2M-208ENST00000567643 KDM3BQ7LBC6 1761 aa23.07■■□□□ 1.28
POLR2M-208ENST00000567643 TEFQ10587 303 aa23.07■■□□□ 1.28
POLR2M-208ENST00000567643 CD2APQ9Y5K6 639 aa23.07■■□□□ 1.28
POLR2M-208ENST00000567643 CYP19A1P11511 503 aaPredicted RBP23.06■■□□□ 1.28
POLR2M-208ENST00000567643 GYS1P13807 737 aa23.06■■□□□ 1.28
POLR2M-208ENST00000567643 RALBP1Q15311 655 aa23.06■■□□□ 1.28
POLR2M-208ENST00000567643 VSIG10Q8N0Z9 540 aa23.06■■□□□ 1.28
POLR2M-208ENST00000567643 YY1P25490 414 aa23.05■■□□□ 1.28
POLR2M-208ENST00000567643 ZNF790Q6PG37 636 aa23.05■■□□□ 1.28
POLR2M-208ENST00000567643 CCDC87Q9NVE4 849 aa23.05■■□□□ 1.28
POLR2M-208ENST00000567643 SCN7AQ01118 1682 aa23.04■■□□□ 1.28
POLR2M-208ENST00000567643 RFC4P35249 363 aa23.04■■□□□ 1.28
POLR2M-208ENST00000567643 SOS1Q07889 1333 aaPredicted RBP23.04■■□□□ 1.28
POLR2M-208ENST00000567643 LAMB4A4D0S4 1761 aa23.04■■□□□ 1.28
POLR2M-208ENST00000567643 HEG1Q9ULI3 1381 aa23.03■■□□□ 1.28
POLR2M-208ENST00000567643 MMP10P09238 476 aa23.03■■□□□ 1.28
POLR2M-208ENST00000567643 TTC5Q8N0Z6 440 aa23.03■■□□□ 1.28
POLR2M-208ENST00000567643 ZNF496Q96IT1 587 aaPredicted RBP23.03■■□□□ 1.28
POLR2M-208ENST00000567643 PLEKHF1Q96S99 279 aa23.03■■□□□ 1.28
POLR2M-208ENST00000567643 USP42Q9H9J4 1324 aaKnown RBP23.03■■□□□ 1.28
POLR2M-208ENST00000567643 GPR162Q16538 588 aa23.02■■□□□ 1.28
POLR2M-208ENST00000567643 MCM10Q7L590 875 aa23.02■■□□□ 1.28
POLR2M-208ENST00000567643 NLGN1Q8N2Q7 840 aa23.02■■□□□ 1.28
POLR2M-208ENST00000567643 SRP68Q9UHB9 627 aaKnown RBP23.02■■□□□ 1.28
POLR2M-208ENST00000567643 ZBTB1Q9Y2K1 713 aa23.02■■□□□ 1.28
POLR2M-208ENST00000567643 NRXN2Q9P2S2 1712 aa23.02■■□□□ 1.28
POLR2M-208ENST00000567643 BCORQ6W2J9 1755 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms