RNA–Protein interactions for RNA: ENST00000567638.1

SCAMP2-209, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 678 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-209ENST00000567638 ERVV-2B6SEH9 535 aa20.51■□□□□ 0.87
SCAMP2-209ENST00000567638 IL13P35225 146 aa20.51■□□□□ 0.87
SCAMP2-209ENST00000567638 AMIGO3Q86WK7 504 aa20.51■□□□□ 0.87
SCAMP2-209ENST00000567638 ITPK1Q13572 414 aa20.5■□□□□ 0.87
SCAMP2-209ENST00000567638 SULT6B1Q6IMI4 303 aa20.5■□□□□ 0.87
SCAMP2-209ENST00000567638 NLGN2Q8NFZ4 835 aa20.5■□□□□ 0.87
SCAMP2-209ENST00000567638 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.49■□□□□ 0.87
SCAMP2-209ENST00000567638 PER1O15534 1290 aaPredicted RBP20.49■□□□□ 0.87
SCAMP2-209ENST00000567638 PHF14O94880 888 aa20.49■□□□□ 0.87
SCAMP2-209ENST00000567638 SSFA2P28290 1259 aa20.49■□□□□ 0.87
SCAMP2-209ENST00000567638 ATP6V1AP38606 617 aa20.49■□□□□ 0.87
SCAMP2-209ENST00000567638 GPR162Q16538 588 aa20.49■□□□□ 0.87
SCAMP2-209ENST00000567638 CICQ96RK0 1608 aaPredicted RBP20.48■□□□□ 0.87
SCAMP2-209ENST00000567638 C1orf141Q5JVX7 400 aa20.47■□□□□ 0.87
SCAMP2-209ENST00000567638 SMIM5Q71RC9 77 aa20.47■□□□□ 0.87
SCAMP2-209ENST00000567638 GNPATO15228 680 aa20.46■□□□□ 0.87
SCAMP2-209ENST00000567638 MTHFSP49914 203 aa20.46■□□□□ 0.87
SCAMP2-209ENST00000567638 C4AP0C0L4 1744 aa20.46■□□□□ 0.87
SCAMP2-209ENST00000567638 TJP1Q07157 1748 aa20.46■□□□□ 0.87
SCAMP2-209ENST00000567638 MYH14Q7Z406 1995 aaKnown RBP20.46■□□□□ 0.87
SCAMP2-209ENST00000567638 UTRNP46939 3433 aa20.46■□□□□ 0.87
SCAMP2-209ENST00000567638 CABP4P57796 275 aa20.45■□□□□ 0.86
SCAMP2-209ENST00000567638 PELP1Q8IZL8 1130 aaKnown RBP20.45■□□□□ 0.86
SCAMP2-209ENST00000567638 CC2D1BQ5T0F9 858 aaKnown RBP20.44■□□□□ 0.86
SCAMP2-209ENST00000567638 SLC4A9Q96Q91 983 aa20.44■□□□□ 0.86
SCAMP2-209ENST00000567638 RBM42Q9BTD8 480 aaKnown RBP20.44■□□□□ 0.86
SCAMP2-209ENST00000567638 NPC1L1Q9UHC9 1359 aa20.44■□□□□ 0.86
SCAMP2-209ENST00000567638 ADAMTS7Q9UKP4 1686 aa20.43■□□□□ 0.86
SCAMP2-209ENST00000567638 CD2APQ9Y5K6 639 aa20.43■□□□□ 0.86
SCAMP2-209ENST00000567638 KIF13BQ9NQT8 1826 aa20.42■□□□□ 0.86
SCAMP2-209ENST00000567638 ZNF784Q8NCA9 323 aaPredicted RBP20.42■□□□□ 0.86
SCAMP2-209ENST00000567638 COL3A1P02461 1466 aaPredicted RBP20.41■□□□□ 0.86
SCAMP2-209ENST00000567638 MRC1P22897 1456 aa20.41■□□□□ 0.86
SCAMP2-209ENST00000567638 YBX3P16989 372 aaKnown RBP eCLIP20.4■□□□□ 0.86
SCAMP2-209ENST00000567638 AKAP4Q5JQC9 854 aa20.4■□□□□ 0.86
SCAMP2-209ENST00000567638 NFATC2IPQ8NCF5 419 aa20.4■□□□□ 0.86
SCAMP2-209ENST00000567638 CNTNAP4Q9C0A0 1308 aa20.4■□□□□ 0.86
SCAMP2-209ENST00000567638 DIAPH1O60610 1272 aaKnown RBP20.39■□□□□ 0.85
SCAMP2-209ENST00000567638 HMOX1P09601 288 aa20.39■□□□□ 0.85
SCAMP2-209ENST00000567638 RC3H1Q5TC82 1133 aaKnown RBP20.39■□□□□ 0.85
SCAMP2-209ENST00000567638 RTCBQ9Y3I0 505 aaKnown RBP20.39■□□□□ 0.85
SCAMP2-209ENST00000567638 KIAA1551Q9HCM1 1747 aa20.38■□□□□ 0.85
SCAMP2-209ENST00000567638 GRIN3BO60391 1043 aa20.37■□□□□ 0.85
SCAMP2-209ENST00000567638 PTCD1O75127 700 aaKnown RBP20.37■□□□□ 0.85
SCAMP2-209ENST00000567638 ADRA2BP18089 450 aa20.36■□□□□ 0.85
SCAMP2-209ENST00000567638 TRAPPC3LQ5T215 181 aa20.36■□□□□ 0.85
SCAMP2-209ENST00000567638 UBR2Q8IWV8 1755 aa20.36■□□□□ 0.85
SCAMP2-209ENST00000567638 RPS6KA4O75676 772 aa20.35■□□□□ 0.85
SCAMP2-209ENST00000567638 N4BP2Q86UW6 1770 aaPredicted RBP20.34■□□□□ 0.85
SCAMP2-209ENST00000567638 CNGB1Q14028 1251 aaPredicted RBP20.34■□□□□ 0.85
SCAMP2-209ENST00000567638 SLC52A2Q9HAB3 445 aa20.34■□□□□ 0.85
SCAMP2-209ENST00000567638 SIPA1L3O60292 1781 aaPredicted RBP20.34■□□□□ 0.85
SCAMP2-209ENST00000567638 RNMTO43148 476 aaKnown RBP20.33■□□□□ 0.85
SCAMP2-209ENST00000567638 MMP10P09238 476 aa20.33■□□□□ 0.85
SCAMP2-209ENST00000567638 MTHFSDQ2M296 383 aaKnown RBP20.33■□□□□ 0.85
SCAMP2-209ENST00000567638 ARHGEF1Q92888 912 aaKnown RBP20.33■□□□□ 0.85
SCAMP2-209ENST00000567638 LGR6Q9HBX8 967 aa20.33■□□□□ 0.85
SCAMP2-209ENST00000567638 GOLGB1Q14789 3259 aaKnown RBP20.33■□□□□ 0.85
SCAMP2-209ENST00000567638 KCPQ6ZWJ8 1503 aa20.32■□□□□ 0.84
SCAMP2-209ENST00000567638 CRKLP46109 303 aaKnown RBP20.32■□□□□ 0.84
SCAMP2-209ENST00000567638 NLGN1Q8N2Q7 840 aa20.32■□□□□ 0.84
SCAMP2-209ENST00000567638 BRCA1P38398 1863 aaKnown RBP20.31■□□□□ 0.84
SCAMP2-209ENST00000567638 RFC4P35249 363 aa20.31■□□□□ 0.84
SCAMP2-209ENST00000567638 GYS1P13807 737 aa20.3■□□□□ 0.84
SCAMP2-209ENST00000567638 C10orf71Q711Q0 1435 aa20.29■□□□□ 0.84
SCAMP2-209ENST00000567638 U2SURPO15042 1029 aaKnown RBP20.29■□□□□ 0.84
SCAMP2-209ENST00000567638 PXDNLA1KZ92 1463 aa20.29■□□□□ 0.84
SCAMP2-209ENST00000567638 SLC39A6Q13433 755 aa20.27■□□□□ 0.84
SCAMP2-209ENST00000567638 DNAJC10Q8IXB1 793 aa20.27■□□□□ 0.84
SCAMP2-209ENST00000567638 USP42Q9H9J4 1324 aaKnown RBP20.27■□□□□ 0.83
SCAMP2-209ENST00000567638 INTS5Q6P9B9 1019 aaKnown RBP20.26■□□□□ 0.83
SCAMP2-209ENST00000567638 WWC3Q9ULE0 1092 aa20.26■□□□□ 0.83
SCAMP2-209ENST00000567638 CFAP53Q96M91 514 aa20.25■□□□□ 0.83
SCAMP2-209ENST00000567638 CCDC87Q9NVE4 849 aa20.25■□□□□ 0.83
SCAMP2-209ENST00000567638 GAS2L2Q8NHY3 880 aa20.24■□□□□ 0.83
SCAMP2-209ENST00000567638 SRP68Q9UHB9 627 aaKnown RBP20.24■□□□□ 0.83
SCAMP2-209ENST00000567638 PARP3Q9Y6F1 533 aa20.24■□□□□ 0.83
SCAMP2-209ENST00000567638 ARFGEF1Q9Y6D6 1849 aa20.24■□□□□ 0.83
SCAMP2-209ENST00000567638 AFDNP55196 1824 aaKnown RBP20.23■□□□□ 0.83
SCAMP2-209ENST00000567638 CYP19A1P11511 503 aaPredicted RBP20.23■□□□□ 0.83
SCAMP2-209ENST00000567638 TGFB2P61812 414 aa20.23■□□□□ 0.83
SCAMP2-209ENST00000567638 SOS1Q07889 1333 aaPredicted RBP20.23■□□□□ 0.83
SCAMP2-209ENST00000567638 ADCY9O60503 1353 aa20.22■□□□□ 0.83
SCAMP2-209ENST00000567638 ATP10DQ9P241 1426 aa20.22■□□□□ 0.83
SCAMP2-209ENST00000567638 GNAT3A8MTJ3 354 aa20.22■□□□□ 0.83
SCAMP2-209ENST00000567638 VSIG10Q8N0Z9 540 aa20.22■□□□□ 0.83
SCAMP2-209ENST00000567638 FKBP8Q14318 412 aa20.21■□□□□ 0.83
SCAMP2-209ENST00000567638 COL15A1P39059 1388 aa20.21■□□□□ 0.83
SCAMP2-209ENST00000567638 NRXN2Q9P2S2 1712 aa20.2■□□□□ 0.82
SCAMP2-209ENST00000567638 GIGYF1O75420 1035 aaPredicted RBP20.2■□□□□ 0.82
SCAMP2-209ENST00000567638 PPP2R1AP30153 589 aa20.2■□□□□ 0.82
SCAMP2-209ENST00000567638 C1QTNF8P60827 252 aa20.2■□□□□ 0.82
SCAMP2-209ENST00000567638 TEFQ10587 303 aa20.2■□□□□ 0.82
SCAMP2-209ENST00000567638 IL17REQ8NFR9 667 aa20.2■□□□□ 0.82
SCAMP2-209ENST00000567638 RSPH6AQ9H0K4 717 aa20.2■□□□□ 0.82
SCAMP2-209ENST00000567638 A0A0G2JLW4 131 aa20.19■□□□□ 0.82
SCAMP2-209ENST00000567638 PRKAR2BP31323 418 aa20.19■□□□□ 0.82
SCAMP2-209ENST00000567638 DDR1Q08345 913 aa20.19■□□□□ 0.82
SCAMP2-209ENST00000567638 TTC5Q8N0Z6 440 aa20.19■□□□□ 0.82
SCAMP2-209ENST00000567638 NUDCQ9Y266 331 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms