RNA–Protein interactions for RNA: ENST00000566938.5

BBS4-212, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 4

Gene BBS4, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-212ENST00000566938 PDE3BQ13370 1112 aa8.7□□□□□ -1.02
BBS4-212ENST00000566938 USP35Q9P2H5 1018 aa8.7□□□□□ -1.02
BBS4-212ENST00000566938 GRXCR2A6NFK2 248 aa8.69□□□□□ -1.02
BBS4-212ENST00000566938 APBA3O96018 575 aa8.69□□□□□ -1.02
BBS4-212ENST00000566938 PBX2P40425 430 aa8.69□□□□□ -1.02
BBS4-212ENST00000566938 R3HDM1Q15032 1099 aaKnown RBP8.69□□□□□ -1.02
BBS4-212ENST00000566938 ZDHHC16Q969W1 377 aa8.69□□□□□ -1.02
BBS4-212ENST00000566938 EVC2Q86UK5 1308 aa8.69□□□□□ -1.02
BBS4-212ENST00000566938 CRB1P82279 1406 aa8.69□□□□□ -1.02
BBS4-212ENST00000566938 PHF14O94880 888 aa8.68□□□□□ -1.02
BBS4-212ENST00000566938 TYW1BQ6NUM6 668 aa8.68□□□□□ -1.02
BBS4-212ENST00000566938 ARHGEF25Q86VW2 580 aa8.68□□□□□ -1.02
BBS4-212ENST00000566938 SIN3AQ96ST3 1273 aa8.68□□□□□ -1.02
BBS4-212ENST00000566938 BCL9O00512 1426 aa8.68□□□□□ -1.02
BBS4-212ENST00000566938 CPSF1Q10570 1443 aaKnown RBP8.68□□□□□ -1.02
BBS4-212ENST00000566938 ARHGAP33O14559 1287 aa8.67□□□□□ -1.02
BBS4-212ENST00000566938 PLSCR1O15162 318 aa8.67□□□□□ -1.02
BBS4-212ENST00000566938 NBR1Q14596 966 aa8.67□□□□□ -1.02
BBS4-212ENST00000566938 TTC21BQ7Z4L5 1316 aa8.67□□□□□ -1.02
BBS4-212ENST00000566938 KCNH5Q8NCM2 988 aa8.67□□□□□ -1.02
BBS4-212ENST00000566938 FBXW7Q969H0 707 aa8.67□□□□□ -1.02
BBS4-212ENST00000566938 EPAS1Q99814 870 aa8.67□□□□□ -1.02
BBS4-212ENST00000566938 QRICH2Q9H0J4 1663 aa8.67□□□□□ -1.02
BBS4-212ENST00000566938 PARP4Q9UKK3 1724 aaKnown RBP8.67□□□□□ -1.02
BBS4-212ENST00000566938 SBNO2Q9Y2G9 1366 aa8.67□□□□□ -1.02
BBS4-212ENST00000566938 AXIN2Q9Y2T1 843 aa8.67□□□□□ -1.02
BBS4-212ENST00000566938 PCDHGA10Q9Y5H3 936 aa8.67□□□□□ -1.02
BBS4-212ENST00000566938 COL18A1P39060 1754 aa8.66□□□□□ -1.02
BBS4-212ENST00000566938 TRPM1Q7Z4N2 1603 aa8.66□□□□□ -1.02
BBS4-212ENST00000566938 WDR17Q8IZU2 1322 aa8.66□□□□□ -1.02
BBS4-212ENST00000566938 TTC21AQ8NDW8 1320 aa8.66□□□□□ -1.02
BBS4-212ENST00000566938 PTPREP23469 700 aa8.66□□□□□ -1.02
BBS4-212ENST00000566938 PTGER2P43116 358 aa8.66□□□□□ -1.02
BBS4-212ENST00000566938 CDCA7Q9BWT1 371 aaPredicted RBP8.66□□□□□ -1.02
BBS4-212ENST00000566938 PEAK1Q9H792 1746 aa8.66□□□□□ -1.02
BBS4-212ENST00000566938 PIK3C2AO00443 1686 aa8.65□□□□□ -1.02
BBS4-212ENST00000566938 OVOS2A0A0G2JMS6 1433 aa8.65□□□□□ -1.02
BBS4-212ENST00000566938 OVOS2A0A0J9YW53 1432 aa8.65□□□□□ -1.02
BBS4-212ENST00000566938 OVOS2Q6IE36 1432 aa8.65□□□□□ -1.02
BBS4-212ENST00000566938 ROCK2O75116 1388 aaKnown RBP8.65□□□□□ -1.02
BBS4-212ENST00000566938 KCNK17Q96T54 332 aa8.65□□□□□ -1.02
BBS4-212ENST00000566938 CARD10Q9BWT7 1032 aa8.65□□□□□ -1.02
BBS4-212ENST00000566938 RREB1Q92766 1687 aa8.65□□□□□ -1.03
BBS4-212ENST00000566938 USP31Q70CQ4 1352 aa8.64□□□□□ -1.03
BBS4-212ENST00000566938 DDB1Q16531 1140 aa8.64□□□□□ -1.03
BBS4-212ENST00000566938 NBPF14Q5TI25 921 aa8.64□□□□□ -1.03
BBS4-212ENST00000566938 ANKRD13DQ6ZTN6 518 aa8.64□□□□□ -1.03
BBS4-212ENST00000566938 TOM1L2Q6ZVM7 507 aa8.64□□□□□ -1.03
BBS4-212ENST00000566938 PUS7Q96PZ0 661 aaKnown RBP8.64□□□□□ -1.03
BBS4-212ENST00000566938 BCL2L12Q9HB09 334 aa8.64□□□□□ -1.03
BBS4-212ENST00000566938 ABCC6O95255 1503 aa8.64□□□□□ -1.03
BBS4-212ENST00000566938 MAP3K7O43318 606 aa8.63□□□□□ -1.03
BBS4-212ENST00000566938 SLC24A1O60721 1099 aa8.63□□□□□ -1.03
BBS4-212ENST00000566938 MARCH10Q8NA82 808 aaPredicted RBP8.63□□□□□ -1.03
BBS4-212ENST00000566938 KRTAP3-3Q9BYR6 98 aa8.63□□□□□ -1.03
BBS4-212ENST00000566938 KRTAP3-2Q9BYR7 98 aa8.63□□□□□ -1.03
BBS4-212ENST00000566938 ADAM33Q9BZ11 813 aa8.63□□□□□ -1.03
BBS4-212ENST00000566938 NFAT5O94916 1531 aa8.63□□□□□ -1.03
BBS4-212ENST00000566938 CD163L1Q9NR16 1453 aa8.63□□□□□ -1.03
BBS4-212ENST00000566938 NUP188Q5SRE5 1749 aa8.63□□□□□ -1.03
BBS4-212ENST00000566938 LRRC37A3O60309 1634 aa8.62□□□□□ -1.03
BBS4-212ENST00000566938 PSEN2P49810 448 aa8.62□□□□□ -1.03
BBS4-212ENST00000566938 NEUROD1Q13562 356 aa8.62□□□□□ -1.03
BBS4-212ENST00000566938 KTN1Q86UP2 1357 aaKnown RBP8.61□□□□□ -1.03
BBS4-212ENST00000566938 CCDC7Q96M83 1385 aa8.61□□□□□ -1.03
BBS4-212ENST00000566938 RGPD3A6NKT7 1758 aaPredicted RBP8.61□□□□□ -1.03
BBS4-212ENST00000566938 AKAP12Q02952 1782 aa8.61□□□□□ -1.03
BBS4-212ENST00000566938 RGPD4Q7Z3J3 1758 aa8.61□□□□□ -1.03
BBS4-212ENST00000566938 LSM11P83369 360 aaKnown RBP eCLIP8.61□□□□□ -1.03
BBS4-212ENST00000566938 PTF1AQ7RTS3 328 aa8.61□□□□□ -1.03
BBS4-212ENST00000566938 USP54Q70EL1 1684 aa8.6□□□□□ -1.03
BBS4-212ENST00000566938 EXOC5O00471 708 aa8.6□□□□□ -1.03
BBS4-212ENST00000566938 KCNQ2O43526 872 aa8.6□□□□□ -1.03
BBS4-212ENST00000566938 SPON1Q9HCB6 807 aa8.6□□□□□ -1.03
BBS4-212ENST00000566938 SBF2Q86WG5 1849 aa8.59□□□□□ -1.03
BBS4-212ENST00000566938 ZBTB7CA1YPR0 619 aa8.59□□□□□ -1.03
BBS4-212ENST00000566938 SEMA3EO15041 775 aa8.59□□□□□ -1.03
BBS4-212ENST00000566938 SMYD5Q6GMV2 418 aa8.59□□□□□ -1.03
BBS4-212ENST00000566938 POTEEQ6S8J3 1075 aa8.59□□□□□ -1.03
BBS4-212ENST00000566938 CARD11Q9BXL7 1154 aa8.59□□□□□ -1.03
BBS4-212ENST00000566938 SLC12A5Q9H2X9 1139 aa8.59□□□□□ -1.03
BBS4-212ENST00000566938 MON2Q7Z3U7 1717 aa8.59□□□□□ -1.03
BBS4-212ENST00000566938 TNS2Q63HR2 1409 aa8.58□□□□□ -1.04
BBS4-212ENST00000566938 EDC4Q6P2E9 1401 aaKnown RBP8.58□□□□□ -1.04
BBS4-212ENST00000566938 TULP1O00294 542 aaPredicted RBP8.58□□□□□ -1.04
BBS4-212ENST00000566938 CSB-PGBD3P0DP91 1061 aa8.58□□□□□ -1.04
BBS4-212ENST00000566938 MLLT3P42568 568 aaPredicted RBP8.58□□□□□ -1.04
BBS4-212ENST00000566938 C6orf132Q5T0Z8 1188 aa8.58□□□□□ -1.04
BBS4-212ENST00000566938 NME9Q86XW9 330 aa8.58□□□□□ -1.04
BBS4-212ENST00000566938 TESK2Q96S53 571 aa8.58□□□□□ -1.04
BBS4-212ENST00000566938 WNK3Q9BYP7 1800 aa8.58□□□□□ -1.04
BBS4-212ENST00000566938 NINLQ9Y2I6 1382 aa8.58□□□□□ -1.04
BBS4-212ENST00000566938 TXNRD1Q16881 649 aa8.57□□□□□ -1.04
BBS4-212ENST00000566938 DMRTA1Q5VZB9 504 aa8.57□□□□□ -1.04
BBS4-212ENST00000566938 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.57□□□□□ -1.04
BBS4-212ENST00000566938 PLSCR2Q9NRY7 297 aa8.57□□□□□ -1.04
BBS4-212ENST00000566938 UTRNP46939 3433 aa8.57□□□□□ -1.04
BBS4-212ENST00000566938 PPP1R3GB7ZBB8 358 aa8.56□□□□□ -1.04
BBS4-212ENST00000566938 IL2RBP14784 551 aa8.56□□□□□ -1.04
BBS4-212ENST00000566938 HDGFL2Q7Z4V5 671 aaPredicted RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms