RNA–Protein interactions for RNA: ENST00000566772.1

KARS-208, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 2

Gene KARS, Length 644 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-208ENST00000566772 ATAD2Q6PL18 1390 aa8.85□□□□□ -0.99
KARS-208ENST00000566772 NDUFB5O43674 189 aa8.84□□□□□ -0.99
KARS-208ENST00000566772 FMR1Q06787 632 aaKnown RBP eCLIP8.84□□□□□ -0.99
KARS-208ENST00000566772 TRMT44Q8IYL2 757 aaKnown RBP8.84□□□□□ -0.99
KARS-208ENST00000566772 TMC1Q8TDI8 760 aa8.84□□□□□ -0.99
KARS-208ENST00000566772 FAM161BQ96MY7 647 aa8.84□□□□□ -0.99
KARS-208ENST00000566772 HS3ST6Q96QI5 342 aa8.84□□□□□ -0.99
KARS-208ENST00000566772 KCTD15Q96SI1 283 aaPredicted RBP8.84□□□□□ -0.99
KARS-208ENST00000566772 RNF19AQ9NV58 838 aa8.84□□□□□ -0.99
KARS-208ENST00000566772 BRPF3Q9ULD4 1205 aa8.84□□□□□ -0.99
KARS-208ENST00000566772 PLCB3Q01970 1234 aa8.83□□□□□ -1
KARS-208ENST00000566772 DSC3Q14574 896 aa8.83□□□□□ -1
KARS-208ENST00000566772 SF3A1Q15459 793 aaKnown RBP8.83□□□□□ -1
KARS-208ENST00000566772 ANKRD13DQ6ZTN6 518 aa8.83□□□□□ -1
KARS-208ENST00000566772 CHMP7Q8WUX9 453 aaPredicted RBP8.83□□□□□ -1
KARS-208ENST00000566772 CCDC87Q9NVE4 849 aa8.83□□□□□ -1
KARS-208ENST00000566772 CDV3Q9UKY7 258 aaKnown RBP8.83□□□□□ -1
KARS-208ENST00000566772 ERVH48-1M5A8F1 160 aa8.82□□□□□ -1
KARS-208ENST00000566772 SMARCA5O60264 1052 aaPredicted RBP8.82□□□□□ -1
KARS-208ENST00000566772 LDHBP07195 334 aaKnown RBP8.82□□□□□ -1
KARS-208ENST00000566772 SCNN1DP51172 638 aa8.82□□□□□ -1
KARS-208ENST00000566772 SH3BP2P78314 561 aa8.82□□□□□ -1
KARS-208ENST00000566772 XPCQ01831 940 aaPredicted RBP8.82□□□□□ -1
KARS-208ENST00000566772 PIK3R5Q8WYR1 880 aa8.82□□□□□ -1
KARS-208ENST00000566772 RNF166Q96A37 237 aaPredicted RBP8.82□□□□□ -1
KARS-208ENST00000566772 VTI1AQ96AJ9 217 aa8.82□□□□□ -1
KARS-208ENST00000566772 TSPAN10Q9H1Z9 355 aaPredicted RBP8.82□□□□□ -1
KARS-208ENST00000566772 PARP2Q9UGN5 583 aa8.82□□□□□ -1
KARS-208ENST00000566772 SERTAD1Q9UHV2 236 aa8.82□□□□□ -1
KARS-208ENST00000566772 FZD6O60353 706 aa8.81□□□□□ -1
KARS-208ENST00000566772 MAPK8P45983 427 aa8.81□□□□□ -1
KARS-208ENST00000566772 GDF10P55107 478 aa8.81□□□□□ -1
KARS-208ENST00000566772 RAD51AP2Q09MP3 1159 aa8.81□□□□□ -1
KARS-208ENST00000566772 C16orf46Q6P387 395 aa8.81□□□□□ -1
KARS-208ENST00000566772 TMEM87AQ8NBN3 555 aa8.81□□□□□ -1
KARS-208ENST00000566772 MTRQ99707 1265 aa8.81□□□□□ -1
KARS-208ENST00000566772 DUSP9Q99956 384 aaKnown RBP8.81□□□□□ -1
KARS-208ENST00000566772 ESF1Q9H501 851 aaKnown RBP8.81□□□□□ -1
KARS-208ENST00000566772 A0A1W2PRU2 124 aa8.8□□□□□ -1
KARS-208ENST00000566772 BACH1O14867 736 aa8.8□□□□□ -1
KARS-208ENST00000566772 EIF1AXP47813 144 aaKnown RBP8.8□□□□□ -1
KARS-208ENST00000566772 EPHA4P54764 986 aa8.8□□□□□ -1
KARS-208ENST00000566772 EHHADHQ08426 723 aa8.8□□□□□ -1
KARS-208ENST00000566772 AAMPQ13685 434 aa8.8□□□□□ -1
KARS-208ENST00000566772 INTS6LQ5JSJ4 861 aaKnown RBP8.8□□□□□ -1
KARS-208ENST00000566772 ZNF516Q92618 1163 aa8.8□□□□□ -1
KARS-208ENST00000566772 CITED4Q96RK1 184 aa8.8□□□□□ -1
KARS-208ENST00000566772 WWC3Q9ULE0 1092 aa8.8□□□□□ -1
KARS-208ENST00000566772 FCF1Q9Y324 198 aaKnown RBP8.8□□□□□ -1
KARS-208ENST00000566772 PRPF40AO75400 957 aaKnown RBP8.79□□□□□ -1
KARS-208ENST00000566772 ERVK-9P63128 1117 aa8.79□□□□□ -1
KARS-208ENST00000566772 METTL16Q86W50 562 aaKnown RBP8.79□□□□□ -1
KARS-208ENST00000566772 SPATA32Q96LK8 384 aa8.79□□□□□ -1
KARS-208ENST00000566772 OSBPL3Q9H4L5 887 aa8.79□□□□□ -1
KARS-208ENST00000566772 TNFRSF10BO14763 440 aa8.78□□□□□ -1
KARS-208ENST00000566772 IGHA2P01877 340 aa8.78□□□□□ -1
KARS-208ENST00000566772 TBCELQ5QJ74 424 aa8.78□□□□□ -1
KARS-208ENST00000566772 COX20Q5RI15 118 aa8.78□□□□□ -1
KARS-208ENST00000566772 CC2D2BQ6DHV5 1058 aa8.78□□□□□ -1
KARS-208ENST00000566772 NT5DC4Q86YG4 428 aa8.78□□□□□ -1
KARS-208ENST00000566772 SETDB2Q96T68 719 aa8.78□□□□□ -1
KARS-208ENST00000566772 PRKD2Q9BZL6 878 aa8.78□□□□□ -1
KARS-208ENST00000566772 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.78□□□□□ -1
KARS-208ENST00000566772 PPP1R12BO60237 982 aaPredicted RBP8.77□□□□□ -1.01
KARS-208ENST00000566772 S1PR4O95977 384 aa8.77□□□□□ -1.01
KARS-208ENST00000566772 INHAP05111 366 aa8.77□□□□□ -1.01
KARS-208ENST00000566772 ALKBH2Q6NS38 261 aa8.77□□□□□ -1.01
KARS-208ENST00000566772 TMC4Q7Z404 712 aa8.77□□□□□ -1.01
KARS-208ENST00000566772 DMRTB1Q96MA1 342 aa8.77□□□□□ -1.01
KARS-208ENST00000566772 MRS2Q9HD23 443 aa8.77□□□□□ -1.01
KARS-208ENST00000566772 STIM2Q9P246 746 aa8.77□□□□□ -1.01
KARS-208ENST00000566772 WASLO00401 505 aaPredicted RBP8.76□□□□□ -1.01
KARS-208ENST00000566772 GPR182O15218 404 aa8.76□□□□□ -1.01
KARS-208ENST00000566772 DAB2P98082 770 aa8.76□□□□□ -1.01
KARS-208ENST00000566772 THSD4Q6ZMP0 1018 aa8.76□□□□□ -1.01
KARS-208ENST00000566772 VASH1Q7L8A9 365 aaPredicted RBP8.76□□□□□ -1.01
KARS-208ENST00000566772 FAM129BQ96TA1 746 aa8.76□□□□□ -1.01
KARS-208ENST00000566772 ETNK1Q9HBU6 452 aa8.76□□□□□ -1.01
KARS-208ENST00000566772 CYLDQ9NQC7 956 aa8.76□□□□□ -1.01
KARS-208ENST00000566772 TMPRSS4Q9NRS4 437 aa8.76□□□□□ -1.01
KARS-208ENST00000566772 ZBTB39O15060 712 aa8.75□□□□□ -1.01
KARS-208ENST00000566772 SORBS3O60504 671 aa8.75□□□□□ -1.01
KARS-208ENST00000566772 FGD1P98174 961 aa8.75□□□□□ -1.01
KARS-208ENST00000566772 PSMD2Q13200 908 aa8.75□□□□□ -1.01
KARS-208ENST00000566772 TJAP1Q5JTD0 557 aa8.75□□□□□ -1.01
KARS-208ENST00000566772 NKX2-3Q8TAU0 364 aa8.75□□□□□ -1.01
KARS-208ENST00000566772 SLC4A9Q96Q91 983 aa8.75□□□□□ -1.01
KARS-208ENST00000566772 C2orf49Q9BVC5 232 aaPredicted RBP8.75□□□□□ -1.01
KARS-208ENST00000566772 VTI1BQ9UEU0 232 aa8.75□□□□□ -1.01
KARS-208ENST00000566772 CADPSQ9ULU8 1353 aa8.74□□□□□ -1.01
KARS-208ENST00000566772 CANXP27824 592 aaKnown RBP8.74□□□□□ -1.01
KARS-208ENST00000566772 FANCCQ00597 558 aa8.74□□□□□ -1.01
KARS-208ENST00000566772 FOXK2Q01167 660 aa8.74□□□□□ -1.01
KARS-208ENST00000566772 FAM26DQ5JW98 314 aa8.74□□□□□ -1.01
KARS-208ENST00000566772 SLC9A9Q8IVB4 645 aa8.74□□□□□ -1.01
KARS-208ENST00000566772 RNF34Q969K3 372 aa8.74□□□□□ -1.01
KARS-208ENST00000566772 TANGO6Q9C0B7 1094 aa8.74□□□□□ -1.01
KARS-208ENST00000566772 NIF3L1Q9GZT8 377 aa8.74□□□□□ -1.01
KARS-208ENST00000566772 IL21Q9HBE4 155 aa8.74□□□□□ -1.01
KARS-208ENST00000566772 PDE3BQ13370 1112 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms