RNA–Protein interactions for RNA: ENST00000566609.1

LMF1-208, Transcript of lipase maturation factor 1, human

TSL 4

Gene LMF1, Length 573 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMF1-208	ENST00000566609	MSL1	Q68DK7	614 aa		27.9	■■■□□ 2.06
LMF1-208	ENST00000566609	LINC00116	Q8NCU8	138 aa		27.89	■■■□□ 2.06
LMF1-208	ENST00000566609	NPC1L1	Q9UHC9	1359 aa		27.88	■■■□□ 2.05
LMF1-208	ENST00000566609	PHF14	O94880	888 aa		27.88	■■■□□ 2.05
LMF1-208	ENST00000566609	KDM6A	O15550	1401 aa	Predicted RBP	27.87	■■■□□ 2.05
LMF1-208	ENST00000566609	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	27.87	■■■□□ 2.05
LMF1-208	ENST00000566609	SSFA2	P28290	1259 aa		27.87	■■■□□ 2.05
LMF1-208	ENST00000566609	ITPK1	Q13572	414 aa		27.86	■■■□□ 2.05
LMF1-208	ENST00000566609	GPR162	Q16538	588 aa		27.86	■■■□□ 2.05
LMF1-208	ENST00000566609	RBM42	Q9BTD8	480 aa	Known RBP	27.86	■■■□□ 2.05
LMF1-208	ENST00000566609	DIAPH1	O60610	1272 aa	Known RBP	27.85	■■■□□ 2.05
LMF1-208	ENST00000566609	CNGB1	Q14028	1251 aa	Predicted RBP	27.85	■■■□□ 2.05
LMF1-208	ENST00000566609	GNPAT	O15228	680 aa		27.84	■■■□□ 2.05
LMF1-208	ENST00000566609	UBR3	Q6ZT12	1888 aa		27.84	■■■□□ 2.05
LMF1-208	ENST00000566609	HMOX1	P09601	288 aa		27.82	■■■□□ 2.04
LMF1-208	ENST00000566609	AKAP4	Q5JQC9	854 aa		27.82	■■■□□ 2.04
LMF1-208	ENST00000566609	AMIGO3	Q86WK7	504 aa		27.82	■■■□□ 2.04
LMF1-208	ENST00000566609	PELP1	Q8IZL8	1130 aa	Known RBP	27.81	■■■□□ 2.04
LMF1-208	ENST00000566609	NLGN2	Q8NFZ4	835 aa		27.8	■■■□□ 2.04
LMF1-208	ENST00000566609	NFATC2IP	Q8NCF5	419 aa		27.79	■■■□□ 2.04
LMF1-208	ENST00000566609	ZNF831	Q5JPB2	1677 aa		27.78	■■■□□ 2.04
LMF1-208	ENST00000566609	SMIM5	Q71RC9	77 aa		27.78	■■■□□ 2.04
LMF1-208	ENST00000566609	RTCB	Q9Y3I0	505 aa	Known RBP	27.78	■■■□□ 2.04
LMF1-208	ENST00000566609	CD2AP	Q9Y5K6	639 aa		27.77	■■■□□ 2.04
LMF1-208	ENST00000566609	RC3H1	Q5TC82	1133 aa	Known RBP	27.76	■■■□□ 2.03
LMF1-208	ENST00000566609	SLC4A9	Q96Q91	983 aa		27.76	■■■□□ 2.03
LMF1-208	ENST00000566609	PTCD1	O75127	700 aa	Known RBP	27.75	■■■□□ 2.03
LMF1-208	ENST00000566609	TRAPPC3L	Q5T215	181 aa		27.75	■■■□□ 2.03
LMF1-208	ENST00000566609	CNTNAP4	Q9C0A0	1308 aa		27.74	■■■□□ 2.03
LMF1-208	ENST00000566609	SCN11A	Q9UI33	1791 aa		27.74	■■■□□ 2.03
LMF1-208	ENST00000566609	U2SURP	O15042	1029 aa	Known RBP	27.73	■■■□□ 2.03
LMF1-208	ENST00000566609	CHD4	Q14839	1912 aa		27.73	■■■□□ 2.03
LMF1-208	ENST00000566609	ADRA2B	P18089	450 aa		27.72	■■■□□ 2.03
LMF1-208	ENST00000566609	CFAP53	Q96M91	514 aa		27.72	■■■□□ 2.03
LMF1-208	ENST00000566609	SLC52A2	Q9HAB3	445 aa		27.72	■■■□□ 2.03
LMF1-208	ENST00000566609	MTHFSD	Q2M296	383 aa	Known RBP	27.71	■■■□□ 2.03
LMF1-208	ENST00000566609	UTRN	P46939	3433 aa		27.71	■■■□□ 2.03
LMF1-208	ENST00000566609	COL3A1	P02461	1466 aa	Predicted RBP	27.7	■■■□□ 2.03
LMF1-208	ENST00000566609	COL5A3	P25940	1745 aa	Predicted RBP	27.7	■■■□□ 2.03
LMF1-208	ENST00000566609	RNMT	O43148	476 aa	Known RBP	27.7	■■■□□ 2.02
LMF1-208	ENST00000566609	GRIN3B	O60391	1043 aa		27.7	■■■□□ 2.02
LMF1-208	ENST00000566609	RPS6KA4	O75676	772 aa		27.7	■■■□□ 2.02
LMF1-208	ENST00000566609	LGR6	Q9HBX8	967 aa		27.7	■■■□□ 2.02
LMF1-208	ENST00000566609	RFC4	P35249	363 aa		27.68	■■■□□ 2.02
LMF1-208	ENST00000566609	NLGN1	Q8N2Q7	840 aa		27.67	■■■□□ 2.02
LMF1-208	ENST00000566609	MRC1	P22897	1456 aa		27.66	■■■□□ 2.02
LMF1-208	ENST00000566609	ARHGEF1	Q92888	912 aa	Known RBP	27.66	■■■□□ 2.02
LMF1-208	ENST00000566609	MMP10	P09238	476 aa		27.65	■■■□□ 2.02
LMF1-208	ENST00000566609	CRKL	P46109	303 aa	Known RBP	27.65	■■■□□ 2.02
LMF1-208	ENST00000566609	ZNF784	Q8NCA9	323 aa	Predicted RBP	27.65	■■■□□ 2.02
LMF1-208	ENST00000566609	GAS2L2	Q8NHY3	880 aa		27.65	■■■□□ 2.02
LMF1-208	ENST00000566609	YBX3	P16989	372 aa	Known RBP eCLIP	27.64	■■■□□ 2.02
LMF1-208	ENST00000566609	NUDC	Q9Y266	331 aa		27.64	■■■□□ 2.02
LMF1-208	ENST00000566609	CIC	Q96RK0	1608 aa	Predicted RBP	27.62	■■■□□ 2.01
LMF1-208	ENST00000566609	TJP1	Q07157	1748 aa		27.61	■■■□□ 2.01
LMF1-208	ENST00000566609	VIRMA	Q69YN4	1812 aa	Known RBP	27.6	■■■□□ 2.01
LMF1-208	ENST00000566609	ADAMTS7	Q9UKP4	1686 aa		27.6	■■■□□ 2.01
LMF1-208	ENST00000566609	GNAT3	A8MTJ3	354 aa		27.6	■■■□□ 2.01
LMF1-208	ENST00000566609	GYS1	P13807	737 aa		27.6	■■■□□ 2.01
LMF1-208	ENST00000566609	SLC39A6	Q13433	755 aa		27.6	■■■□□ 2.01
LMF1-208	ENST00000566609	MYH14	Q7Z406	1995 aa	Known RBP	27.6	■■■□□ 2.01
LMF1-208	ENST00000566609	PPP2R1A	P30153	589 aa		27.59	■■■□□ 2.01
LMF1-208	ENST00000566609	DNAJC10	Q8IXB1	793 aa		27.59	■■■□□ 2.01
LMF1-208	ENST00000566609	TEF	Q10587	303 aa		27.58	■■■□□ 2.01
LMF1-208	ENST00000566609	TTC5	Q8N0Z6	440 aa		27.58	■■■□□ 2.01
LMF1-208	ENST00000566609	CCDC87	Q9NVE4	849 aa		27.58	■■■□□ 2.01
LMF1-208	ENST00000566609	PARP3	Q9Y6F1	533 aa		27.57	■■■□□ 2
LMF1-208	ENST00000566609	PRKAR2B	P31323	418 aa		27.56	■■■□□ 2
LMF1-208	ENST00000566609	INTS5	Q6P9B9	1019 aa	Known RBP	27.56	■■■□□ 2
LMF1-208	ENST00000566609	VSIG10	Q8N0Z9	540 aa		27.56	■■■□□ 2
LMF1-208	ENST00000566609	C4A	P0C0L4	1744 aa		27.55	■■■□□ 2
LMF1-208	ENST00000566609	GOLGB1	Q14789	3259 aa	Known RBP	27.55	■■■□□ 2
LMF1-208	ENST00000566609	U2AF1L5	P0DN76	240 aa	Predicted RBP	27.54	■■■□□ 2
LMF1-208	ENST00000566609	U2AF1	Q01081	240 aa	Known RBP eCLIP	27.54	■■■□□ 2
LMF1-208	ENST00000566609	KCP	Q6ZWJ8	1503 aa		27.54	■■■□□ 2
LMF1-208	ENST00000566609	RSPH6A	Q9H0K4	717 aa		27.54	■■■□□ 2
LMF1-208	ENST00000566609	USP42	Q9H9J4	1324 aa	Known RBP	27.54	■■■□□ 2
LMF1-208	ENST00000566609	CYP19A1	P11511	503 aa	Predicted RBP	27.53	■■■□□ 2
LMF1-208	ENST00000566609	ZPR1	O75312	459 aa		27.52	■■■□□ 2
LMF1-208	ENST00000566609	TGFB2	P61812	414 aa		27.52	■■■□□ 2
LMF1-208	ENST00000566609	IL17RE	Q8NFR9	667 aa		27.52	■■■□□ 2
LMF1-208	ENST00000566609	SRP68	Q9UHB9	627 aa	Known RBP	27.52	■■■□□ 2
LMF1-208	ENST00000566609	WWC3	Q9ULE0	1092 aa		27.51	■■□□□ 1.99
LMF1-208	ENST00000566609	SOS1	Q07889	1333 aa	Predicted RBP	27.5	■■□□□ 1.99
LMF1-208	ENST00000566609	PHACTR3	Q96KR7	559 aa		27.5	■■□□□ 1.99
LMF1-208	ENST00000566609	C10orf71	Q711Q0	1435 aa		27.5	■■□□□ 1.99
LMF1-208	ENST00000566609	FCHSD2	O94868	740 aa		27.49	■■□□□ 1.99
LMF1-208	ENST00000566609	FKBP8	Q14318	412 aa		27.49	■■□□□ 1.99
LMF1-208	ENST00000566609	STARD3NL	O95772	234 aa		27.48	■■□□□ 1.99
LMF1-208	ENST00000566609	ZNF790	Q6PG37	636 aa		27.48	■■□□□ 1.99
LMF1-208	ENST00000566609	PXDNL	A1KZ92	1463 aa		27.48	■■□□□ 1.99
LMF1-208	ENST00000566609	KIF13B	Q9NQT8	1826 aa		27.48	■■□□□ 1.99
LMF1-208	ENST00000566609	UBR2	Q8IWV8	1755 aa		27.48	■■□□□ 1.99
LMF1-208	ENST00000566609	RTF1	Q92541	710 aa	Known RBP	27.47	■■□□□ 1.99
LMF1-208	ENST00000566609	ZBTB1	Q9Y2K1	713 aa		27.47	■■□□□ 1.99
LMF1-208	ENST00000566609	COL15A1	P39059	1388 aa		27.47	■■□□□ 1.99
LMF1-208	ENST00000566609	TEX13A	Q9BXU3	409 aa	Predicted RBP	27.46	■■□□□ 1.99
LMF1-208	ENST00000566609	CEMIP	Q8WUJ3	1361 aa		27.46	■■□□□ 1.99
LMF1-208	ENST00000566609	USPL1	Q5W0Q7	1092 aa		27.45	■■□□□ 1.98
LMF1-208	ENST00000566609		A0A0G2JLW4	131 aa		27.44	■■□□□ 1.98

Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms