RNA–Protein interactions for RNA: ENST00000566234.2

CDIP1-208, Transcript of cell death inducing p53 target 1, humanhuman

TSL 3

Gene CDIP1, Length 299 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDIP1-208ENST00000566234 AMIGO3Q86WK7 504 aa17.86■□□□□ 0.45
CDIP1-208ENST00000566234 NFATC2IPQ8NCF5 419 aa17.86■□□□□ 0.45
CDIP1-208ENST00000566234 RBM42Q9BTD8 480 aaKnown RBP17.86■□□□□ 0.45
CDIP1-208ENST00000566234 QSER1Q2KHR3 1735 aa17.86■□□□□ 0.45
CDIP1-208ENST00000566234 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.85■□□□□ 0.45
CDIP1-208ENST00000566234 PHF14O94880 888 aa17.85■□□□□ 0.45
CDIP1-208ENST00000566234 SMIM5Q71RC9 77 aa17.85■□□□□ 0.45
CDIP1-208ENST00000566234 KLHL34Q8N239 644 aa17.85■□□□□ 0.45
CDIP1-208ENST00000566234 SLC4A9Q96Q91 983 aa17.85■□□□□ 0.45
CDIP1-208ENST00000566234 ITGB4P16144 1822 aa17.84■□□□□ 0.45
CDIP1-208ENST00000566234 C5P01031 1676 aa17.84■□□□□ 0.45
CDIP1-208ENST00000566234 SSFA2P28290 1259 aa17.84■□□□□ 0.45
CDIP1-208ENST00000566234 U2SURPO15042 1029 aaKnown RBP17.83■□□□□ 0.44
CDIP1-208ENST00000566234 GNPATO15228 680 aa17.83■□□□□ 0.44
CDIP1-208ENST00000566234 YY1P25490 414 aa17.83■□□□□ 0.44
CDIP1-208ENST00000566234 C4BP0C0L5 1744 aa17.82■□□□□ 0.44
CDIP1-208ENST00000566234 MTHFSDQ2M296 383 aaKnown RBP17.82■□□□□ 0.44
CDIP1-208ENST00000566234 LGR6Q9HBX8 967 aa17.82■□□□□ 0.44
CDIP1-208ENST00000566234 PTCD1O75127 700 aaKnown RBP17.81■□□□□ 0.44
CDIP1-208ENST00000566234 TUBGCP6Q96RT7 1819 aa17.81■□□□□ 0.44
CDIP1-208ENST00000566234 RNMTO43148 476 aaKnown RBP17.8■□□□□ 0.44
CDIP1-208ENST00000566234 RC3H1Q5TC82 1133 aaKnown RBP17.8■□□□□ 0.44
CDIP1-208ENST00000566234 CFAP53Q96M91 514 aa17.8■□□□□ 0.44
CDIP1-208ENST00000566234 SLC52A2Q9HAB3 445 aa17.8■□□□□ 0.44
CDIP1-208ENST00000566234 COL3A1P02461 1466 aaPredicted RBP17.8■□□□□ 0.44
CDIP1-208ENST00000566234 UTRNP46939 3433 aa17.79■□□□□ 0.44
CDIP1-208ENST00000566234 NLGN2Q8NFZ4 835 aa17.79■□□□□ 0.44
CDIP1-208ENST00000566234 RTCBQ9Y3I0 505 aaKnown RBP17.79■□□□□ 0.44
CDIP1-208ENST00000566234 PPP2R1AP30153 589 aa17.78■□□□□ 0.44
CDIP1-208ENST00000566234 GPR162Q16538 588 aa17.78■□□□□ 0.44
CDIP1-208ENST00000566234 TRAPPC3LQ5T215 181 aa17.78■□□□□ 0.44
CDIP1-208ENST00000566234 COL24A1Q17RW2 1714 aa17.78■□□□□ 0.44
CDIP1-208ENST00000566234 CNTNAP4Q9C0A0 1308 aa17.77■□□□□ 0.44
CDIP1-208ENST00000566234 TAF1LQ8IZX4 1826 aa17.77■□□□□ 0.43
CDIP1-208ENST00000566234 RPS6KA4O75676 772 aa17.76■□□□□ 0.43
CDIP1-208ENST00000566234 NUDCQ9Y266 331 aa17.76■□□□□ 0.43
CDIP1-208ENST00000566234 CD2APQ9Y5K6 639 aa17.76■□□□□ 0.43
CDIP1-208ENST00000566234 ADRA2BP18089 450 aa17.75■□□□□ 0.43
CDIP1-208ENST00000566234 GAS2L2Q8NHY3 880 aa17.75■□□□□ 0.43
CDIP1-208ENST00000566234 ARHGEF1Q92888 912 aaKnown RBP17.75■□□□□ 0.43
CDIP1-208ENST00000566234 CRKLP46109 303 aaKnown RBP17.74■□□□□ 0.43
CDIP1-208ENST00000566234 PELP1Q8IZL8 1130 aaKnown RBP17.74■□□□□ 0.43
CDIP1-208ENST00000566234 GNAT3A8MTJ3 354 aa17.73■□□□□ 0.43
CDIP1-208ENST00000566234 SLC39A6Q13433 755 aa17.73■□□□□ 0.43
CDIP1-208ENST00000566234 NLGN1Q8N2Q7 840 aa17.73■□□□□ 0.43
CDIP1-208ENST00000566234 PRKAR2BP31323 418 aa17.72■□□□□ 0.43
CDIP1-208ENST00000566234 RFC4P35249 363 aa17.72■□□□□ 0.43
CDIP1-208ENST00000566234 PHACTR3Q96KR7 559 aa17.72■□□□□ 0.43
CDIP1-208ENST00000566234 RSPH6AQ9H0K4 717 aa17.72■□□□□ 0.43
CDIP1-208ENST00000566234 ZNF831Q5JPB2 1677 aa17.71■□□□□ 0.43
CDIP1-208ENST00000566234 MMP10P09238 476 aa17.71■□□□□ 0.43
CDIP1-208ENST00000566234 U2AF1L5P0DN76 240 aaPredicted RBP17.71■□□□□ 0.43
CDIP1-208ENST00000566234 U2AF1Q01081 240 aaKnown RBP eCLIP17.71■□□□□ 0.43
CDIP1-208ENST00000566234 DNAJC10Q8IXB1 793 aa17.71■□□□□ 0.43
CDIP1-208ENST00000566234 IL17REQ8NFR9 667 aa17.71■□□□□ 0.43
CDIP1-208ENST00000566234 UBR3Q6ZT12 1888 aa17.71■□□□□ 0.43
CDIP1-208ENST00000566234 MRC1P22897 1456 aa17.7■□□□□ 0.42
CDIP1-208ENST00000566234 GYS1P13807 737 aa17.7■□□□□ 0.42
CDIP1-208ENST00000566234 TEFQ10587 303 aa17.7■□□□□ 0.42
CDIP1-208ENST00000566234 INTS5Q6P9B9 1019 aaKnown RBP17.7■□□□□ 0.42
CDIP1-208ENST00000566234 GOLGB1Q14789 3259 aaKnown RBP17.7■□□□□ 0.42
CDIP1-208ENST00000566234 GRIN3BO60391 1043 aa17.69■□□□□ 0.42
CDIP1-208ENST00000566234 FCHSD2O94868 740 aa17.69■□□□□ 0.42
CDIP1-208ENST00000566234 VSIG10Q8N0Z9 540 aa17.69■□□□□ 0.42
CDIP1-208ENST00000566234 CYP19A1P11511 503 aaPredicted RBP17.68■□□□□ 0.42
CDIP1-208ENST00000566234 YBX3P16989 372 aaKnown RBP eCLIP17.68■□□□□ 0.42
CDIP1-208ENST00000566234 TTC5Q8N0Z6 440 aa17.68■□□□□ 0.42
CDIP1-208ENST00000566234 CCDC87Q9NVE4 849 aa17.68■□□□□ 0.42
CDIP1-208ENST00000566234 SCN11AQ9UI33 1791 aa17.66■□□□□ 0.42
CDIP1-208ENST00000566234 ADAMTS7Q9UKP4 1686 aa17.65■□□□□ 0.42
CDIP1-208ENST00000566234 ZNF790Q6PG37 636 aa17.65■□□□□ 0.42
CDIP1-208ENST00000566234 SRP68Q9UHB9 627 aaKnown RBP17.65■□□□□ 0.42
CDIP1-208ENST00000566234 PARP3Q9Y6F1 533 aa17.65■□□□□ 0.42
CDIP1-208ENST00000566234 KCPQ6ZWJ8 1503 aa17.65■□□□□ 0.42
CDIP1-208ENST00000566234 USP42Q9H9J4 1324 aaKnown RBP17.65■□□□□ 0.42
CDIP1-208ENST00000566234 CEMIPQ8WUJ3 1361 aa17.65■□□□□ 0.42
CDIP1-208ENST00000566234 ZNF784Q8NCA9 323 aaPredicted RBP17.64■□□□□ 0.41
CDIP1-208ENST00000566234 SOS1Q07889 1333 aaPredicted RBP17.64■□□□□ 0.41
CDIP1-208ENST00000566234 COL5A3P25940 1745 aaPredicted RBP17.64■□□□□ 0.41
CDIP1-208ENST00000566234 STARD3NLO95772 234 aa17.63■□□□□ 0.41
CDIP1-208ENST00000566234 FKBP8Q14318 412 aa17.63■□□□□ 0.41
CDIP1-208ENST00000566234 RTF1Q92541 710 aaKnown RBP17.63■□□□□ 0.41
CDIP1-208ENST00000566234 ZNF496Q96IT1 587 aaPredicted RBP17.63■□□□□ 0.41
CDIP1-208ENST00000566234 BTBD11A6QL63 1104 aa17.62■□□□□ 0.41
CDIP1-208ENST00000566234 ZPR1O75312 459 aa17.62■□□□□ 0.41
CDIP1-208ENST00000566234 TEX13AQ9BXU3 409 aaPredicted RBP17.62■□□□□ 0.41
CDIP1-208ENST00000566234 ZBTB1Q9Y2K1 713 aa17.62■□□□□ 0.41
CDIP1-208ENST00000566234 CICQ96RK0 1608 aaPredicted RBP17.61■□□□□ 0.41
CDIP1-208ENST00000566234 TJP1Q07157 1748 aa17.61■□□□□ 0.41
CDIP1-208ENST00000566234 HTATSF1O43719 755 aaKnown RBP17.61■□□□□ 0.41
CDIP1-208ENST00000566234 TGFB2P61812 414 aa17.61■□□□□ 0.41
CDIP1-208ENST00000566234 DDX10Q13206 875 aaKnown RBP17.61■□□□□ 0.41
CDIP1-208ENST00000566234 USPL1Q5W0Q7 1092 aa17.61■□□□□ 0.41
CDIP1-208ENST00000566234 MCM10Q7L590 875 aa17.61■□□□□ 0.41
CDIP1-208ENST00000566234 FMNL2Q96PY5 1086 aa17.61■□□□□ 0.41
CDIP1-208ENST00000566234 CANXP27824 592 aaKnown RBP17.6■□□□□ 0.41
CDIP1-208ENST00000566234 RALBP1Q15311 655 aa17.6■□□□□ 0.41
CDIP1-208ENST00000566234 NARFQ9UHQ1 456 aa17.6■□□□□ 0.41
CDIP1-208ENST00000566234 WWC3Q9ULE0 1092 aa17.6■□□□□ 0.41
CDIP1-208ENST00000566234 HEG1Q9ULI3 1381 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms