RNA–Protein interactions for RNA: ENST00000566215.5

UBE3A-205, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBE3A, Length 3,176 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-205ENST00000566215 COL11A2P13942 1736 aaPredicted RBP8.73□□□□□ -1.01
UBE3A-205ENST00000566215 RIC1Q4ADV7 1423 aa8.72□□□□□ -1.01
UBE3A-205ENST00000566215 KCPQ6ZWJ8 1503 aa8.72□□□□□ -1.01
UBE3A-205ENST00000566215 HSP90AB1P08238 724 aaKnown RBP8.72□□□□□ -1.01
UBE3A-205ENST00000566215 ACSBG1Q96GR2 724 aa8.72□□□□□ -1.01
UBE3A-205ENST00000566215 LAMB4A4D0S4 1761 aa8.72□□□□□ -1.01
UBE3A-205ENST00000566215 CDCA8Q53HL2 280 aa8.71□□□□□ -1.01
UBE3A-205ENST00000566215 SMC1BQ8NDV3 1235 aa8.71□□□□□ -1.01
UBE3A-205ENST00000566215 CCDC87Q9NVE4 849 aa8.71□□□□□ -1.01
UBE3A-205ENST00000566215 SPG7Q9UQ90 795 aa8.71□□□□□ -1.01
UBE3A-205ENST00000566215 CCDC88AQ3V6T2 1871 aa8.71□□□□□ -1.01
UBE3A-205ENST00000566215 KCNA3P22001 575 aa8.7□□□□□ -1.02
UBE3A-205ENST00000566215 AK7Q96M32 723 aa8.7□□□□□ -1.02
UBE3A-205ENST00000566215 TIMELESSQ9UNS1 1208 aa8.7□□□□□ -1.02
UBE3A-205ENST00000566215 TRPM7Q96QT4 1865 aa8.69□□□□□ -1.02
UBE3A-205ENST00000566215 RPS6KA4O75676 772 aa8.69□□□□□ -1.02
UBE3A-205ENST00000566215 RGS19P49795 217 aa8.69□□□□□ -1.02
UBE3A-205ENST00000566215 RAPGEF4Q8WZA2 1011 aa8.69□□□□□ -1.02
UBE3A-205ENST00000566215 NBPF6Q5VWK0 638 aa8.69□□□□□ -1.02
UBE3A-205ENST00000566215 NBPF4Q96M43 638 aa8.69□□□□□ -1.02
UBE3A-205ENST00000566215 CYP27B1O15528 508 aa8.69□□□□□ -1.02
UBE3A-205ENST00000566215 LOC102724428A0A0B4J2F2 783 aa8.68□□□□□ -1.02
UBE3A-205ENST00000566215 SIK1P57059 783 aa8.68□□□□□ -1.02
UBE3A-205ENST00000566215 LINC00116Q8NCU8 138 aa8.68□□□□□ -1.02
UBE3A-205ENST00000566215 DDX60Q8IY21 1712 aaKnown RBP8.68□□□□□ -1.02
UBE3A-205ENST00000566215 FYB1O15117 783 aa8.67□□□□□ -1.02
UBE3A-205ENST00000566215 LTBP1Q14766 1721 aa8.67□□□□□ -1.02
UBE3A-205ENST00000566215 TM4SF1P30408 202 aa8.67□□□□□ -1.02
UBE3A-205ENST00000566215 DUOX1Q9NRD9 1551 aa8.66□□□□□ -1.02
UBE3A-205ENST00000566215 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.66□□□□□ -1.02
UBE3A-205ENST00000566215 PHKG2P15735 406 aa8.66□□□□□ -1.02
UBE3A-205ENST00000566215 IFNL2Q8IZJ0 200 aa8.66□□□□□ -1.02
UBE3A-205ENST00000566215 VSIG10Q8N0Z9 540 aa8.66□□□□□ -1.02
UBE3A-205ENST00000566215 PIGBQ92521 554 aa8.66□□□□□ -1.02
UBE3A-205ENST00000566215 USP42Q9H9J4 1324 aaKnown RBP8.66□□□□□ -1.02
UBE3A-205ENST00000566215 TMF1P82094 1093 aa8.65□□□□□ -1.02
UBE3A-205ENST00000566215 AMOTQ4VCS5 1084 aa8.65□□□□□ -1.02
UBE3A-205ENST00000566215 RBBP6Q7Z6E9 1792 aaKnown RBP8.65□□□□□ -1.02
UBE3A-205ENST00000566215 GYS1P13807 737 aa8.65□□□□□ -1.02
UBE3A-205ENST00000566215 AMPHP49418 695 aa8.65□□□□□ -1.03
UBE3A-205ENST00000566215 CREBZFQ9NS37 354 aa8.65□□□□□ -1.03
UBE3A-205ENST00000566215 PIM2Q9P1W9 311 aa8.65□□□□□ -1.03
UBE3A-205ENST00000566215 L3MBTL3Q96JM7 780 aaPredicted RBP8.64□□□□□ -1.03
UBE3A-205ENST00000566215 SLC12A5Q9H2X9 1139 aa8.64□□□□□ -1.03
UBE3A-205ENST00000566215 ATG3Q9NT62 314 aa8.64□□□□□ -1.03
UBE3A-205ENST00000566215 SNED1Q8TER0 1413 aa8.64□□□□□ -1.03
UBE3A-205ENST00000566215 PASKQ96RG2 1323 aa8.64□□□□□ -1.03
UBE3A-205ENST00000566215 CNTNAP1P78357 1384 aa8.64□□□□□ -1.03
UBE3A-205ENST00000566215 DDX54Q8TDD1 881 aaKnown RBP8.64□□□□□ -1.03
UBE3A-205ENST00000566215 LRRC37AA6NMS7 1700 aa8.64□□□□□ -1.03
UBE3A-205ENST00000566215 IBTKQ9P2D0 1353 aaPredicted RBP8.64□□□□□ -1.03
UBE3A-205ENST00000566215 GLTPD2A6NH11 291 aa8.63□□□□□ -1.03
UBE3A-205ENST00000566215 ITPK1Q13572 414 aa8.63□□□□□ -1.03
UBE3A-205ENST00000566215 TRAPPC3LQ5T215 181 aa8.63□□□□□ -1.03
UBE3A-205ENST00000566215 RTCBQ9Y3I0 505 aaKnown RBP8.63□□□□□ -1.03
UBE3A-205ENST00000566215 GRIPAP1Q4V328 841 aa8.63□□□□□ -1.03
UBE3A-205ENST00000566215 SOGA3Q5TF21 947 aa8.63□□□□□ -1.03
UBE3A-205ENST00000566215 ANKRD36CQ5JPF3 1778 aa8.63□□□□□ -1.03
UBE3A-205ENST00000566215 PLEKHG5O94827 1062 aa8.63□□□□□ -1.03
UBE3A-205ENST00000566215 TMOD3Q9NYL9 352 aa8.63□□□□□ -1.03
UBE3A-205ENST00000566215 CARD11Q9BXL7 1154 aa8.62□□□□□ -1.03
UBE3A-205ENST00000566215 CLSPNQ9HAW4 1339 aa8.62□□□□□ -1.03
UBE3A-205ENST00000566215 DALRD3Q5D0E6 543 aaKnown RBP8.62□□□□□ -1.03
UBE3A-205ENST00000566215 PARP3Q9Y6F1 533 aa8.62□□□□□ -1.03
UBE3A-205ENST00000566215 SOS1Q07889 1333 aaPredicted RBP8.62□□□□□ -1.03
UBE3A-205ENST00000566215 LMNB1P20700 586 aa8.61□□□□□ -1.03
UBE3A-205ENST00000566215 AMIGO3Q86WK7 504 aa8.61□□□□□ -1.03
UBE3A-205ENST00000566215 ZNF609O15014 1411 aa8.61□□□□□ -1.03
UBE3A-205ENST00000566215 POLRMTO00411 1230 aaKnown RBP8.61□□□□□ -1.03
UBE3A-205ENST00000566215 MMP10P09238 476 aa8.61□□□□□ -1.03
UBE3A-205ENST00000566215 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.61□□□□□ -1.032e-6■■■□□ 17.3
UBE3A-205ENST00000566215 C16orf71Q8IYS4 520 aaPredicted RBP8.61□□□□□ -1.03
UBE3A-205ENST00000566215 NPC1L1Q9UHC9 1359 aa8.61□□□□□ -1.03
UBE3A-205ENST00000566215 VEGFAP15692 232 aaPredicted RBP8.6□□□□□ -1.03
UBE3A-205ENST00000566215 PPARGC1BQ86YN6 1023 aaKnown RBP8.6□□□□□ -1.03
UBE3A-205ENST00000566215 HHIPL1Q96JK4 782 aa8.6□□□□□ -1.03
UBE3A-205ENST00000566215 KDM3BQ7LBC6 1761 aa8.6□□□□□ -1.03
UBE3A-205ENST00000566215 DPEP1P16444 411 aa8.6□□□□□ -1.03
UBE3A-205ENST00000566215 C9orf131Q5VYM1 1079 aa8.6□□□□□ -1.03
UBE3A-205ENST00000566215 KLRG2A4D1S0 409 aaPredicted RBP8.59□□□□□ -1.03
UBE3A-205ENST00000566215 TNS4Q8IZW8 715 aa8.59□□□□□ -1.03
UBE3A-205ENST00000566215 VPS33BQ9H267 617 aa8.59□□□□□ -1.03
UBE3A-205ENST00000566215 LAMB2P55268 1798 aa8.59□□□□□ -1.03
UBE3A-205ENST00000566215 A0A087WZG4 1122 aa8.59□□□□□ -1.03
UBE3A-205ENST00000566215 ZBTB7CA1YPR0 619 aa8.59□□□□□ -1.03
UBE3A-205ENST00000566215 ARHGEF1Q92888 912 aaKnown RBP8.59□□□□□ -1.03
UBE3A-205ENST00000566215 STYK1Q6J9G0 422 aa8.59□□□□□ -1.04
UBE3A-205ENST00000566215 PSME4Q14997 1843 aa8.58□□□□□ -1.04
UBE3A-205ENST00000566215 SLC4A9Q96Q91 983 aa8.58□□□□□ -1.04
UBE3A-205ENST00000566215 NARFQ9UHQ1 456 aa8.58□□□□□ -1.04
UBE3A-205ENST00000566215 RASSF10A6NK89 507 aa8.58□□□□□ -1.04
UBE3A-205ENST00000566215 GNPATO15228 680 aa8.58□□□□□ -1.04
UBE3A-205ENST00000566215 ATP6V1AP38606 617 aa8.58□□□□□ -1.04
UBE3A-205ENST00000566215 COL3A1P02461 1466 aaPredicted RBP8.58□□□□□ -1.04
UBE3A-205ENST00000566215 COL13A1Q5TAT6 717 aaPredicted RBP8.57□□□□□ -1.04
UBE3A-205ENST00000566215 POTECB2RU33 542 aa8.57□□□□□ -1.04
UBE3A-205ENST00000566215 PLEKHO1Q53GL0 409 aaPredicted RBP8.57□□□□□ -1.04
UBE3A-205ENST00000566215 NMRK2Q9NPI5 230 aa8.57□□□□□ -1.04
UBE3A-205ENST00000566215 CACNA1SQ13698 1873 aa8.57□□□□□ -1.04
UBE3A-205ENST00000566215 CTCFP49711 727 aaPredicted RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms