RNA–Protein interactions for RNA: ENST00000566141.5

SNAP23-212, Transcript of synaptosome associated protein 23, humanhuman

TSL 2

Gene SNAP23, Length 647 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP23-212ENST00000566141 GPR162Q16538 588 aa27.89■■■□□ 2.06
SNAP23-212ENST00000566141 RBM42Q9BTD8 480 aaKnown RBP27.89■■■□□ 2.06
SNAP23-212ENST00000566141 ATG3Q9NT62 314 aa27.87■■■□□ 2.05
SNAP23-212ENST00000566141 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.86■■■□□ 2.05
SNAP23-212ENST00000566141 GNPATO15228 680 aa27.86■■■□□ 2.05
SNAP23-212ENST00000566141 LINC00116Q8NCU8 138 aa27.86■■■□□ 2.05
SNAP23-212ENST00000566141 COL24A1Q17RW2 1714 aa27.86■■■□□ 2.05
SNAP23-212ENST00000566141 KDRP35968 1356 aa27.86■■■□□ 2.05
SNAP23-212ENST00000566141 SSFA2P28290 1259 aa27.85■■■□□ 2.05
SNAP23-212ENST00000566141 KDM6AO15550 1401 aaPredicted RBP27.84■■■□□ 2.05
SNAP23-212ENST00000566141 DIAPH1O60610 1272 aaKnown RBP27.84■■■□□ 2.05
SNAP23-212ENST00000566141 PER1O15534 1290 aaPredicted RBP27.83■■■□□ 2.05
SNAP23-212ENST00000566141 HMOX1P09601 288 aa27.83■■■□□ 2.05
SNAP23-212ENST00000566141 ITPK1Q13572 414 aa27.82■■■□□ 2.04
SNAP23-212ENST00000566141 UBR3Q6ZT12 1888 aa27.82■■■□□ 2.04
SNAP23-212ENST00000566141 NPC1L1Q9UHC9 1359 aa27.8■■■□□ 2.04
SNAP23-212ENST00000566141 NLGN2Q8NFZ4 835 aa27.79■■■□□ 2.04
SNAP23-212ENST00000566141 U2SURPO15042 1029 aaKnown RBP27.78■■■□□ 2.04
SNAP23-212ENST00000566141 AKAP4Q5JQC9 854 aa27.78■■■□□ 2.04
SNAP23-212ENST00000566141 RTCBQ9Y3I0 505 aaKnown RBP27.78■■■□□ 2.04
SNAP23-212ENST00000566141 PTCD1O75127 700 aaKnown RBP27.77■■■□□ 2.04
SNAP23-212ENST00000566141 SMIM5Q71RC9 77 aa27.77■■■□□ 2.04
SNAP23-212ENST00000566141 NFATC2IPQ8NCF5 419 aa27.76■■■□□ 2.03
SNAP23-212ENST00000566141 AMIGO3Q86WK7 504 aa27.75■■■□□ 2.03
SNAP23-212ENST00000566141 CFAP53Q96M91 514 aa27.75■■■□□ 2.03
SNAP23-212ENST00000566141 TRAPPC3LQ5T215 181 aa27.73■■■□□ 2.03
SNAP23-212ENST00000566141 CD2APQ9Y5K6 639 aa27.73■■■□□ 2.03
SNAP23-212ENST00000566141 SCN11AQ9UI33 1791 aa27.72■■■□□ 2.03
SNAP23-212ENST00000566141 ZNF831Q5JPB2 1677 aa27.72■■■□□ 2.03
SNAP23-212ENST00000566141 CNTNAP4Q9C0A0 1308 aa27.71■■■□□ 2.03
SNAP23-212ENST00000566141 CHD4Q14839 1912 aa27.71■■■□□ 2.03
SNAP23-212ENST00000566141 ADRA2BP18089 450 aa27.69■■■□□ 2.02
SNAP23-212ENST00000566141 RFC4P35249 363 aa27.69■■■□□ 2.02
SNAP23-212ENST00000566141 SLC4A9Q96Q91 983 aa27.69■■■□□ 2.02
SNAP23-212ENST00000566141 SLC52A2Q9HAB3 445 aa27.69■■■□□ 2.02
SNAP23-212ENST00000566141 COL5A3P25940 1745 aaPredicted RBP27.69■■■□□ 2.02
SNAP23-212ENST00000566141 GRIN3BO60391 1043 aa27.68■■■□□ 2.02
SNAP23-212ENST00000566141 RC3H1Q5TC82 1133 aaKnown RBP27.68■■■□□ 2.02
SNAP23-212ENST00000566141 RNMTO43148 476 aaKnown RBP27.67■■■□□ 2.02
SNAP23-212ENST00000566141 MTHFSDQ2M296 383 aaKnown RBP27.67■■■□□ 2.02
SNAP23-212ENST00000566141 COL3A1P02461 1466 aaPredicted RBP27.66■■■□□ 2.02
SNAP23-212ENST00000566141 RPS6KA4O75676 772 aa27.65■■■□□ 2.02
SNAP23-212ENST00000566141 MMP10P09238 476 aa27.65■■■□□ 2.02
SNAP23-212ENST00000566141 GAS2L2Q8NHY3 880 aa27.65■■■□□ 2.02
SNAP23-212ENST00000566141 LGR6Q9HBX8 967 aa27.65■■■□□ 2.02
SNAP23-212ENST00000566141 NUDCQ9Y266 331 aa27.65■■■□□ 2.02
SNAP23-212ENST00000566141 CRKLP46109 303 aaKnown RBP27.64■■■□□ 2.02
SNAP23-212ENST00000566141 NLGN1Q8N2Q7 840 aa27.64■■■□□ 2.02
SNAP23-212ENST00000566141 MRC1P22897 1456 aa27.64■■■□□ 2.01
SNAP23-212ENST00000566141 ZNF784Q8NCA9 323 aaPredicted RBP27.63■■■□□ 2.01
SNAP23-212ENST00000566141 ARHGEF1Q92888 912 aaKnown RBP27.63■■■□□ 2.01
SNAP23-212ENST00000566141 YBX3P16989 372 aaKnown RBP eCLIP27.62■■■□□ 2.01
SNAP23-212ENST00000566141 TTC5Q8N0Z6 440 aa27.61■■■□□ 2.01
SNAP23-212ENST00000566141 VIRMAQ69YN4 1812 aaKnown RBP27.6■■■□□ 2.01
SNAP23-212ENST00000566141 TEFQ10587 303 aa27.6■■■□□ 2.01
SNAP23-212ENST00000566141 SLC39A6Q13433 755 aa27.6■■■□□ 2.01
SNAP23-212ENST00000566141 WWC3Q9ULE0 1092 aa27.6■■■□□ 2.01
SNAP23-212ENST00000566141 TJP1Q07157 1748 aa27.6■■■□□ 2.01
SNAP23-212ENST00000566141 DNAJC10Q8IXB1 793 aa27.58■■■□□ 2.01
SNAP23-212ENST00000566141 PARP3Q9Y6F1 533 aa27.58■■■□□ 2.01
SNAP23-212ENST00000566141 CICQ96RK0 1608 aaPredicted RBP27.58■■■□□ 2.01
SNAP23-212ENST00000566141 GNAT3A8MTJ3 354 aa27.57■■■□□ 2
SNAP23-212ENST00000566141 CCDC87Q9NVE4 849 aa27.57■■■□□ 2
SNAP23-212ENST00000566141 C4AP0C0L4 1744 aa27.57■■■□□ 2
SNAP23-212ENST00000566141 U2AF1L5P0DN76 240 aaPredicted RBP27.56■■■□□ 2
SNAP23-212ENST00000566141 PPP2R1AP30153 589 aa27.56■■■□□ 2
SNAP23-212ENST00000566141 PRKAR2BP31323 418 aa27.56■■■□□ 2
SNAP23-212ENST00000566141 U2AF1Q01081 240 aaKnown RBP eCLIP27.56■■■□□ 2
SNAP23-212ENST00000566141 GYS1P13807 737 aa27.55■■■□□ 2
SNAP23-212ENST00000566141 MYH14Q7Z406 1995 aaKnown RBP27.54■■■□□ 2
SNAP23-212ENST00000566141 ADAMTS7Q9UKP4 1686 aa27.53■■■□□ 2
SNAP23-212ENST00000566141 ZPR1O75312 459 aa27.53■■■□□ 2
SNAP23-212ENST00000566141 USP42Q9H9J4 1324 aaKnown RBP27.52■■■□□ 2
SNAP23-212ENST00000566141 SRP68Q9UHB9 627 aaKnown RBP27.52■■■□□ 2
SNAP23-212ENST00000566141 KCPQ6ZWJ8 1503 aa27.51■■■□□ 2
SNAP23-212ENST00000566141 NEFMP07197 916 aa27.5■■□□□ 1.99
SNAP23-212ENST00000566141 INTS5Q6P9B9 1019 aaKnown RBP27.5■■□□□ 1.99
SNAP23-212ENST00000566141 RTF1Q92541 710 aaKnown RBP27.5■■□□□ 1.99
SNAP23-212ENST00000566141 VSIG10Q8N0Z9 540 aa27.49■■□□□ 1.99
SNAP23-212ENST00000566141 RSPH6AQ9H0K4 717 aa27.49■■□□□ 1.99
SNAP23-212ENST00000566141 C10orf71Q711Q0 1435 aa27.49■■□□□ 1.99
SNAP23-212ENST00000566141 STARD3NLO95772 234 aa27.48■■□□□ 1.99
SNAP23-212ENST00000566141 CYP19A1P11511 503 aaPredicted RBP27.48■■□□□ 1.99
SNAP23-212ENST00000566141 COL15A1P39059 1388 aa27.48■■□□□ 1.99
SNAP23-212ENST00000566141 SOS1Q07889 1333 aaPredicted RBP27.47■■□□□ 1.99
SNAP23-212ENST00000566141 TGFB2P61812 414 aa27.47■■□□□ 1.99
SNAP23-212ENST00000566141 PXDNLA1KZ92 1463 aa27.46■■□□□ 1.99
SNAP23-212ENST00000566141 IL17REQ8NFR9 667 aa27.46■■□□□ 1.99
SNAP23-212ENST00000566141 ZBTB1Q9Y2K1 713 aa27.46■■□□□ 1.99
SNAP23-212ENST00000566141 UBR2Q8IWV8 1755 aa27.45■■□□□ 1.99
SNAP23-212ENST00000566141 CANXP27824 592 aaKnown RBP27.45■■□□□ 1.98
SNAP23-212ENST00000566141 FKBP8Q14318 412 aa27.45■■□□□ 1.98
SNAP23-212ENST00000566141 USPL1Q5W0Q7 1092 aa27.45■■□□□ 1.98
SNAP23-212ENST00000566141 ZNF790Q6PG37 636 aa27.45■■□□□ 1.98
SNAP23-212ENST00000566141 NPM2Q86SE8 214 aaKnown RBP27.45■■□□□ 1.98
SNAP23-212ENST00000566141 PHACTR3Q96KR7 559 aa27.45■■□□□ 1.98
SNAP23-212ENST00000566141 BCS1LQ9Y276 419 aa27.45■■□□□ 1.98
SNAP23-212ENST00000566141 ZNF330Q9Y3S2 320 aaPredicted RBP27.45■■□□□ 1.98
SNAP23-212ENST00000566141 GIGYF1O75420 1035 aaPredicted RBP27.44■■□□□ 1.98
SNAP23-212ENST00000566141 KIF13BQ9NQT8 1826 aa27.44■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms