RNA–Protein interactions for RNA: ENST00000565626.1

NSMCE1-210, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE1, Length 259 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-210ENST00000565626 POLD1P28340 1107 aa14.83□□□□□ -0.04
NSMCE1-210ENST00000565626 ATP6V1AP38606 617 aa14.83□□□□□ -0.04
NSMCE1-210ENST00000565626 C1orf141Q5JVX7 400 aa14.83□□□□□ -0.04
NSMCE1-210ENST00000565626 NPC1L1Q9UHC9 1359 aa14.83□□□□□ -0.04
NSMCE1-210ENST00000565626 DIAPH1O60610 1272 aaKnown RBP14.82□□□□□ -0.04
NSMCE1-210ENST00000565626 CABP4P57796 275 aa14.82□□□□□ -0.04
NSMCE1-210ENST00000565626 C4BP0C0L5 1744 aa14.82□□□□□ -0.04
NSMCE1-210ENST00000565626 TAF1LQ8IZX4 1826 aa14.82□□□□□ -0.04
NSMCE1-210ENST00000565626 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.81□□□□□ -0.04
NSMCE1-210ENST00000565626 DCAF8L1A6NGE4 600 aa14.81□□□□□ -0.04
NSMCE1-210ENST00000565626 RBM42Q9BTD8 480 aaKnown RBP14.81□□□□□ -0.04
NSMCE1-210ENST00000565626 GNPATO15228 680 aa14.8□□□□□ -0.04
NSMCE1-210ENST00000565626 NFATC2IPQ8NCF5 419 aa14.8□□□□□ -0.04
NSMCE1-210ENST00000565626 NLGN2Q8NFZ4 835 aa14.8□□□□□ -0.04
NSMCE1-210ENST00000565626 MAP3K5Q99683 1374 aa14.8□□□□□ -0.04
NSMCE1-210ENST00000565626 COL3A1P02461 1466 aaPredicted RBP14.8□□□□□ -0.04
NSMCE1-210ENST00000565626 YY1P25490 414 aa14.79□□□□□ -0.04
NSMCE1-210ENST00000565626 MTHFSDQ2M296 383 aaKnown RBP14.79□□□□□ -0.04
NSMCE1-210ENST00000565626 FLAD1Q8NFF5 587 aa14.79□□□□□ -0.04
NSMCE1-210ENST00000565626 LGR6Q9HBX8 967 aa14.79□□□□□ -0.04
NSMCE1-210ENST00000565626 COL24A1Q17RW2 1714 aa14.78□□□□□ -0.04
NSMCE1-210ENST00000565626 U2SURPO15042 1029 aaKnown RBP14.78□□□□□ -0.04
NSMCE1-210ENST00000565626 PTCD1O75127 700 aaKnown RBP14.78□□□□□ -0.04
NSMCE1-210ENST00000565626 AKAP4Q5JQC9 854 aa14.78□□□□□ -0.04
NSMCE1-210ENST00000565626 SSFA2P28290 1259 aa14.77□□□□□ -0.05
NSMCE1-210ENST00000565626 UBR3Q6ZT12 1888 aa14.76□□□□□ -0.05
NSMCE1-210ENST00000565626 HMGB2P26583 209 aaKnown RBP14.76□□□□□ -0.05
NSMCE1-210ENST00000565626 RNMTO43148 476 aaKnown RBP14.75□□□□□ -0.05
NSMCE1-210ENST00000565626 PELP1Q8IZL8 1130 aaKnown RBP14.75□□□□□ -0.05
NSMCE1-210ENST00000565626 PPP2R1AP30153 589 aa14.74□□□□□ -0.05
NSMCE1-210ENST00000565626 SLC39A6Q13433 755 aa14.74□□□□□ -0.05
NSMCE1-210ENST00000565626 GPR162Q16538 588 aa14.74□□□□□ -0.05
NSMCE1-210ENST00000565626 SLC52A2Q9HAB3 445 aa14.74□□□□□ -0.05
NSMCE1-210ENST00000565626 RTCBQ9Y3I0 505 aaKnown RBP14.73□□□□□ -0.05
NSMCE1-210ENST00000565626 CNTNAP4Q9C0A0 1308 aa14.72□□□□□ -0.05
NSMCE1-210ENST00000565626 TRAPPC3LQ5T215 181 aa14.72□□□□□ -0.05
NSMCE1-210ENST00000565626 ARHGEF1Q92888 912 aaKnown RBP14.72□□□□□ -0.05
NSMCE1-210ENST00000565626 SCN11AQ9UI33 1791 aa14.71□□□□□ -0.05
NSMCE1-210ENST00000565626 CRKLP46109 303 aaKnown RBP14.71□□□□□ -0.05
NSMCE1-210ENST00000565626 RC3H1Q5TC82 1133 aaKnown RBP14.71□□□□□ -0.05
NSMCE1-210ENST00000565626 PHACTR3Q96KR7 559 aa14.71□□□□□ -0.05
NSMCE1-210ENST00000565626 RPS6KA4O75676 772 aa14.7□□□□□ -0.06
NSMCE1-210ENST00000565626 YBX3P16989 372 aaKnown RBP eCLIP14.7□□□□□ -0.06
NSMCE1-210ENST00000565626 PRKAR2BP31323 418 aa14.7□□□□□ -0.06
NSMCE1-210ENST00000565626 DNAJC10Q8IXB1 793 aa14.7□□□□□ -0.06
NSMCE1-210ENST00000565626 IL17REQ8NFR9 667 aa14.7□□□□□ -0.06
NSMCE1-210ENST00000565626 CFAP53Q96M91 514 aa14.7□□□□□ -0.06
NSMCE1-210ENST00000565626 RSPH6AQ9H0K4 717 aa14.7□□□□□ -0.06
NSMCE1-210ENST00000565626 MYH14Q7Z406 1995 aaKnown RBP14.7□□□□□ -0.06
NSMCE1-210ENST00000565626 MRC1P22897 1456 aa14.69□□□□□ -0.06
NSMCE1-210ENST00000565626 MMP10P09238 476 aa14.69□□□□□ -0.06
NSMCE1-210ENST00000565626 INTS5Q6P9B9 1019 aaKnown RBP14.69□□□□□ -0.06
NSMCE1-210ENST00000565626 WWC3Q9ULE0 1092 aa14.69□□□□□ -0.06
NSMCE1-210ENST00000565626 CD2APQ9Y5K6 639 aa14.69□□□□□ -0.06
NSMCE1-210ENST00000565626 COL5A3P25940 1745 aaPredicted RBP14.69□□□□□ -0.06
NSMCE1-210ENST00000565626 ZNF831Q5JPB2 1677 aa14.68□□□□□ -0.06
NSMCE1-210ENST00000565626 U2AF1L5P0DN76 240 aaPredicted RBP14.68□□□□□ -0.06
NSMCE1-210ENST00000565626 U2AF1Q01081 240 aaKnown RBP eCLIP14.68□□□□□ -0.06
NSMCE1-210ENST00000565626 GAS2L2Q8NHY3 880 aa14.68□□□□□ -0.06
NSMCE1-210ENST00000565626 SRP68Q9UHB9 627 aaKnown RBP14.68□□□□□ -0.06
NSMCE1-210ENST00000565626 TJP1Q07157 1748 aa14.67□□□□□ -0.06
NSMCE1-210ENST00000565626 GNAT3A8MTJ3 354 aa14.67□□□□□ -0.06
NSMCE1-210ENST00000565626 GYS1P13807 737 aa14.67□□□□□ -0.06
NSMCE1-210ENST00000565626 ADRA2BP18089 450 aa14.67□□□□□ -0.06
NSMCE1-210ENST00000565626 RFC4P35249 363 aa14.67□□□□□ -0.06
NSMCE1-210ENST00000565626 ADAMTS7Q9UKP4 1686 aa14.67□□□□□ -0.06
NSMCE1-210ENST00000565626 KCPQ6ZWJ8 1503 aa14.66□□□□□ -0.06
NSMCE1-210ENST00000565626 NUDCQ9Y266 331 aa14.66□□□□□ -0.06
NSMCE1-210ENST00000565626 CYP19A1P11511 503 aaPredicted RBP14.65□□□□□ -0.06
NSMCE1-210ENST00000565626 NLGN1Q8N2Q7 840 aa14.65□□□□□ -0.06
NSMCE1-210ENST00000565626 ZNF784Q8NCA9 323 aaPredicted RBP14.65□□□□□ -0.06
NSMCE1-210ENST00000565626 CCDC87Q9NVE4 849 aa14.65□□□□□ -0.06
NSMCE1-210ENST00000565626 TEFQ10587 303 aa14.64□□□□□ -0.07
NSMCE1-210ENST00000565626 FKBP8Q14318 412 aa14.64□□□□□ -0.07
NSMCE1-210ENST00000565626 ZBTB1Q9Y2K1 713 aa14.64□□□□□ -0.07
NSMCE1-210ENST00000565626 KCNQ3O43525 872 aa14.63□□□□□ -0.07
NSMCE1-210ENST00000565626 ZNF496Q96IT1 587 aaPredicted RBP14.63□□□□□ -0.07
NSMCE1-210ENST00000565626 VIRMAQ69YN4 1812 aaKnown RBP14.63□□□□□ -0.07
NSMCE1-210ENST00000565626 SOS1Q07889 1333 aaPredicted RBP14.63□□□□□ -0.07
NSMCE1-210ENST00000565626 USP42Q9H9J4 1324 aaKnown RBP14.63□□□□□ -0.07
NSMCE1-210ENST00000565626 CICQ96RK0 1608 aaPredicted RBP14.63□□□□□ -0.07
NSMCE1-210ENST00000565626 CEMIPQ8WUJ3 1361 aa14.62□□□□□ -0.07
NSMCE1-210ENST00000565626 FCHSD2O94868 740 aa14.62□□□□□ -0.07
NSMCE1-210ENST00000565626 C4AP0C0L4 1744 aa14.62□□□□□ -0.07
NSMCE1-210ENST00000565626 DCTN1Q14203 1278 aa14.62□□□□□ -0.07
NSMCE1-210ENST00000565626 ZNF790Q6PG37 636 aa14.62□□□□□ -0.07
NSMCE1-210ENST00000565626 TTC5Q8N0Z6 440 aa14.62□□□□□ -0.07
NSMCE1-210ENST00000565626 GRIN3BO60391 1043 aa14.61□□□□□ -0.07
NSMCE1-210ENST00000565626 CANXP27824 592 aaKnown RBP14.61□□□□□ -0.07
NSMCE1-210ENST00000565626 DDR1Q08345 913 aa14.61□□□□□ -0.07
NSMCE1-210ENST00000565626 DDX10Q13206 875 aaKnown RBP14.61□□□□□ -0.07
NSMCE1-210ENST00000565626 MCM10Q7L590 875 aa14.61□□□□□ -0.07
NSMCE1-210ENST00000565626 VSIG10Q8N0Z9 540 aa14.61□□□□□ -0.07
NSMCE1-210ENST00000565626 PARP3Q9Y6F1 533 aa14.61□□□□□ -0.07
NSMCE1-210ENST00000565626 A0A0G2JLW4 131 aa14.6□□□□□ -0.07
NSMCE1-210ENST00000565626 USPL1Q5W0Q7 1092 aa14.6□□□□□ -0.07
NSMCE1-210ENST00000565626 CHD4Q14839 1912 aa14.6□□□□□ -0.07
NSMCE1-210ENST00000565626 C10orf71Q711Q0 1435 aa14.59□□□□□ -0.07
NSMCE1-210ENST00000565626 PXDNLA1KZ92 1463 aa14.59□□□□□ -0.07
NSMCE1-210ENST00000565626 BTBD11A6QL63 1104 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms