RNA–Protein interactions for RNA: ENST00000565453.1

CDH3-204, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-204ENST00000565453 YY1P25490 414 aa21.29■■□□□ 1
CDH3-204ENST00000565453 AK7Q96M32 723 aa21.29■■□□□ 1
CDH3-204ENST00000565453 ZNF831Q5JPB2 1677 aa21.28■■□□□ 1
CDH3-204ENST00000565453 ATP6V1AP38606 617 aa21.27■■□□□ 1
CDH3-204ENST00000565453 MSL1Q68DK7 614 aa21.27■■□□□ 1
CDH3-204ENST00000565453 SMIM5Q71RC9 77 aa21.26■□□□□ 0.99
CDH3-204ENST00000565453 SLC4A9Q96Q91 983 aa21.26■□□□□ 0.99
CDH3-204ENST00000565453 COL3A1P02461 1466 aaPredicted RBP21.26■□□□□ 0.99
CDH3-204ENST00000565453 SSFA2P28290 1259 aa21.25■□□□□ 0.99
CDH3-204ENST00000565453 C1orf141Q5JVX7 400 aa21.25■□□□□ 0.99
CDH3-204ENST00000565453 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.24■□□□□ 0.99
CDH3-204ENST00000565453 CABP4P57796 275 aa21.24■□□□□ 0.99
CDH3-204ENST00000565453 DIAPH1O60610 1272 aaKnown RBP21.23■□□□□ 0.99
CDH3-204ENST00000565453 PHF14O94880 888 aa21.23■□□□□ 0.99
CDH3-204ENST00000565453 KLHL34Q8N239 644 aa21.23■□□□□ 0.99
CDH3-204ENST00000565453 NLGN2Q8NFZ4 835 aa21.23■□□□□ 0.99
CDH3-204ENST00000565453 SCN11AQ9UI33 1791 aa21.23■□□□□ 0.99
CDH3-204ENST00000565453 HMOX1P09601 288 aa21.22■□□□□ 0.99
CDH3-204ENST00000565453 COL5A3P25940 1745 aaPredicted RBP21.21■□□□□ 0.99
CDH3-204ENST00000565453 GNPATO15228 680 aa21.21■□□□□ 0.99
CDH3-204ENST00000565453 AKAP4Q5JQC9 854 aa21.21■□□□□ 0.99
CDH3-204ENST00000565453 NFATC2IPQ8NCF5 419 aa21.2■□□□□ 0.98
CDH3-204ENST00000565453 RBM42Q9BTD8 480 aaKnown RBP21.2■□□□□ 0.98
CDH3-204ENST00000565453 MRC1P22897 1456 aa21.19■□□□□ 0.98
CDH3-204ENST00000565453 ADAMTS7Q9UKP4 1686 aa21.18■□□□□ 0.98
CDH3-204ENST00000565453 CNGB1Q14028 1251 aaPredicted RBP21.18■□□□□ 0.98
CDH3-204ENST00000565453 RC3H1Q5TC82 1133 aaKnown RBP21.18■□□□□ 0.98
CDH3-204ENST00000565453 CNTNAP4Q9C0A0 1308 aa21.18■□□□□ 0.98
CDH3-204ENST00000565453 CICQ96RK0 1608 aaPredicted RBP21.18■□□□□ 0.98
CDH3-204ENST00000565453 MTHFSDQ2M296 383 aaKnown RBP21.17■□□□□ 0.98
CDH3-204ENST00000565453 LGR6Q9HBX8 967 aa21.17■□□□□ 0.98
CDH3-204ENST00000565453 GPR162Q16538 588 aa21.16■□□□□ 0.98
CDH3-204ENST00000565453 CD2APQ9Y5K6 639 aa21.16■□□□□ 0.98
CDH3-204ENST00000565453 TJP1Q07157 1748 aa21.15■□□□□ 0.98
CDH3-204ENST00000565453 RNMTO43148 476 aaKnown RBP21.15■□□□□ 0.98
CDH3-204ENST00000565453 SLC52A2Q9HAB3 445 aa21.15■□□□□ 0.98
CDH3-204ENST00000565453 CHD4Q14839 1912 aa21.14■□□□□ 0.98
CDH3-204ENST00000565453 PTCD1O75127 700 aaKnown RBP21.14■□□□□ 0.97
CDH3-204ENST00000565453 RTCBQ9Y3I0 505 aaKnown RBP21.14■□□□□ 0.97
CDH3-204ENST00000565453 MYH14Q7Z406 1995 aaKnown RBP21.14■□□□□ 0.97
CDH3-204ENST00000565453 VIRMAQ69YN4 1812 aaKnown RBP21.13■□□□□ 0.97
CDH3-204ENST00000565453 RPS6KA4O75676 772 aa21.13■□□□□ 0.97
CDH3-204ENST00000565453 ADRA2BP18089 450 aa21.12■□□□□ 0.97
CDH3-204ENST00000565453 TRAPPC3LQ5T215 181 aa21.12■□□□□ 0.97
CDH3-204ENST00000565453 ARHGEF1Q92888 912 aaKnown RBP21.12■□□□□ 0.97
CDH3-204ENST00000565453 U2SURPO15042 1029 aaKnown RBP21.11■□□□□ 0.97
CDH3-204ENST00000565453 YBX3P16989 372 aaKnown RBP eCLIP21.11■□□□□ 0.97
CDH3-204ENST00000565453 PELP1Q8IZL8 1130 aaKnown RBP21.11■□□□□ 0.97
CDH3-204ENST00000565453 CRKLP46109 303 aaKnown RBP21.1■□□□□ 0.97
CDH3-204ENST00000565453 C4AP0C0L4 1744 aa21.09■□□□□ 0.97
CDH3-204ENST00000565453 KCPQ6ZWJ8 1503 aa21.09■□□□□ 0.97
CDH3-204ENST00000565453 UTRNP46939 3433 aa21.08■□□□□ 0.97
CDH3-204ENST00000565453 PPP2R1AP30153 589 aa21.08■□□□□ 0.97
CDH3-204ENST00000565453 SLC39A6Q13433 755 aa21.08■□□□□ 0.97
CDH3-204ENST00000565453 ZNF784Q8NCA9 323 aaPredicted RBP21.08■□□□□ 0.97
CDH3-204ENST00000565453 MMP10P09238 476 aa21.07■□□□□ 0.96
CDH3-204ENST00000565453 GYS1P13807 737 aa21.07■□□□□ 0.96
CDH3-204ENST00000565453 INTS5Q6P9B9 1019 aaKnown RBP21.06■□□□□ 0.96
CDH3-204ENST00000565453 DNAJC10Q8IXB1 793 aa21.06■□□□□ 0.96
CDH3-204ENST00000565453 NLGN1Q8N2Q7 840 aa21.06■□□□□ 0.96
CDH3-204ENST00000565453 GAS2L2Q8NHY3 880 aa21.06■□□□□ 0.96
CDH3-204ENST00000565453 CFAP53Q96M91 514 aa21.06■□□□□ 0.96
CDH3-204ENST00000565453 GRIN3BO60391 1043 aa21.05■□□□□ 0.96
CDH3-204ENST00000565453 RFC4P35249 363 aa21.05■□□□□ 0.96
CDH3-204ENST00000565453 IL17REQ8NFR9 667 aa21.05■□□□□ 0.96
CDH3-204ENST00000565453 RSPH6AQ9H0K4 717 aa21.05■□□□□ 0.96
CDH3-204ENST00000565453 UBR2Q8IWV8 1755 aa21.05■□□□□ 0.96
CDH3-204ENST00000565453 KIF13BQ9NQT8 1826 aa21.04■□□□□ 0.96
CDH3-204ENST00000565453 SIPA1L3O60292 1781 aaPredicted RBP21.03■□□□□ 0.96
CDH3-204ENST00000565453 GNAT3A8MTJ3 354 aa21.03■□□□□ 0.96
CDH3-204ENST00000565453 CYP19A1P11511 503 aaPredicted RBP21.03■□□□□ 0.96
CDH3-204ENST00000565453 PHACTR3Q96KR7 559 aa21.03■□□□□ 0.96
CDH3-204ENST00000565453 KIAA1551Q9HCM1 1747 aa21.03■□□□□ 0.96
CDH3-204ENST00000565453 PRKAR2BP31323 418 aa21.02■□□□□ 0.96
CDH3-204ENST00000565453 CCDC87Q9NVE4 849 aa21.02■□□□□ 0.96
CDH3-204ENST00000565453 SRP68Q9UHB9 627 aaKnown RBP21.02■□□□□ 0.96
CDH3-204ENST00000565453 C10orf71Q711Q0 1435 aa21.02■□□□□ 0.96
CDH3-204ENST00000565453 USP42Q9H9J4 1324 aaKnown RBP21.02■□□□□ 0.95
CDH3-204ENST00000565453 VSIG10Q8N0Z9 540 aa21.01■□□□□ 0.95
CDH3-204ENST00000565453 NUDCQ9Y266 331 aa21.01■□□□□ 0.95
CDH3-204ENST00000565453 SOS1Q07889 1333 aaPredicted RBP21.01■□□□□ 0.95
CDH3-204ENST00000565453 PXDNLA1KZ92 1463 aa21.01■□□□□ 0.95
CDH3-204ENST00000565453 CEMIPQ8WUJ3 1361 aa21■□□□□ 0.95
CDH3-204ENST00000565453 U2AF1L5P0DN76 240 aaPredicted RBP20.98■□□□□ 0.95
CDH3-204ENST00000565453 U2AF1Q01081 240 aaKnown RBP eCLIP20.98■□□□□ 0.95
CDH3-204ENST00000565453 TEFQ10587 303 aa20.98■□□□□ 0.95
CDH3-204ENST00000565453 FKBP8Q14318 412 aa20.98■□□□□ 0.95
CDH3-204ENST00000565453 ZBTB1Q9Y2K1 713 aa20.98■□□□□ 0.95
CDH3-204ENST00000565453 PARP3Q9Y6F1 533 aa20.97■□□□□ 0.95
CDH3-204ENST00000565453 FCHSD2O94868 740 aa20.96■□□□□ 0.95
CDH3-204ENST00000565453 TGFB2P61812 414 aa20.96■□□□□ 0.95
CDH3-204ENST00000565453 DDR1Q08345 913 aa20.96■□□□□ 0.95
CDH3-204ENST00000565453 ZNF790Q6PG37 636 aa20.96■□□□□ 0.95
CDH3-204ENST00000565453 TTC5Q8N0Z6 440 aa20.96■□□□□ 0.95
CDH3-204ENST00000565453 ZNF496Q96IT1 587 aaPredicted RBP20.96■□□□□ 0.95
CDH3-204ENST00000565453 WWC3Q9ULE0 1092 aa20.96■□□□□ 0.95
CDH3-204ENST00000565453 N4BP2Q86UW6 1770 aaPredicted RBP20.95■□□□□ 0.94
CDH3-204ENST00000565453 COL15A1P39059 1388 aa20.95■□□□□ 0.94
CDH3-204ENST00000565453 HEG1Q9ULI3 1381 aa20.95■□□□□ 0.94
CDH3-204ENST00000565453 TM4SF1P30408 202 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms