RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 AK7Q96M32 723 aa13.63□□□□□ -0.23
CMTM3-209ENST00000565003 CNGB1Q14028 1251 aaPredicted RBP13.62□□□□□ -0.23
CMTM3-209ENST00000565003 PHF14O94880 888 aa13.61□□□□□ -0.23
CMTM3-209ENST00000565003 YY1P25490 414 aa13.61□□□□□ -0.23
CMTM3-209ENST00000565003 HMGB2P26583 209 aaKnown RBP13.61□□□□□ -0.23
CMTM3-209ENST00000565003 ATP6V1AP38606 617 aa13.61□□□□□ -0.23
CMTM3-209ENST00000565003 C1orf141Q5JVX7 400 aa13.61□□□□□ -0.23
CMTM3-209ENST00000565003 KLHL34Q8N239 644 aa13.61□□□□□ -0.23
CMTM3-209ENST00000565003 FLAD1Q8NFF5 587 aa13.61□□□□□ -0.23
CMTM3-209ENST00000565003 COL3A1P02461 1466 aaPredicted RBP13.61□□□□□ -0.23
CMTM3-209ENST00000565003 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.6□□□□□ -0.23
CMTM3-209ENST00000565003 HMOX1P09601 288 aa13.6□□□□□ -0.23
CMTM3-209ENST00000565003 CABP4P57796 275 aa13.6□□□□□ -0.23
CMTM3-209ENST00000565003 SLC4A9Q96Q91 983 aa13.6□□□□□ -0.23
CMTM3-209ENST00000565003 GNPATO15228 680 aa13.59□□□□□ -0.23
CMTM3-209ENST00000565003 DIAPH1O60610 1272 aaKnown RBP13.59□□□□□ -0.23
CMTM3-209ENST00000565003 NLGN2Q8NFZ4 835 aa13.59□□□□□ -0.23
CMTM3-209ENST00000565003 UTRNP46939 3433 aa13.59□□□□□ -0.23
CMTM3-209ENST00000565003 ZNF831Q5JPB2 1677 aa13.59□□□□□ -0.23
CMTM3-209ENST00000565003 SCN11AQ9UI33 1791 aa13.58□□□□□ -0.23
CMTM3-209ENST00000565003 SSFA2P28290 1259 aa13.58□□□□□ -0.24
CMTM3-209ENST00000565003 RBM42Q9BTD8 480 aaKnown RBP13.58□□□□□ -0.24
CMTM3-209ENST00000565003 COL5A3P25940 1745 aaPredicted RBP13.58□□□□□ -0.24
CMTM3-209ENST00000565003 AKAP4Q5JQC9 854 aa13.57□□□□□ -0.24
CMTM3-209ENST00000565003 NFATC2IPQ8NCF5 419 aa13.57□□□□□ -0.24
CMTM3-209ENST00000565003 MRC1P22897 1456 aa13.56□□□□□ -0.24
CMTM3-209ENST00000565003 PTCD1O75127 700 aaKnown RBP13.55□□□□□ -0.24
CMTM3-209ENST00000565003 MTHFSDQ2M296 383 aaKnown RBP13.55□□□□□ -0.24
CMTM3-209ENST00000565003 LGR6Q9HBX8 967 aa13.55□□□□□ -0.24
CMTM3-209ENST00000565003 ADAMTS7Q9UKP4 1686 aa13.55□□□□□ -0.24
CMTM3-209ENST00000565003 CNTNAP4Q9C0A0 1308 aa13.55□□□□□ -0.24
CMTM3-209ENST00000565003 TJP1Q07157 1748 aa13.54□□□□□ -0.24
CMTM3-209ENST00000565003 U2SURPO15042 1029 aaKnown RBP13.54□□□□□ -0.24
CMTM3-209ENST00000565003 GPR162Q16538 588 aa13.54□□□□□ -0.24
CMTM3-209ENST00000565003 VIRMAQ69YN4 1812 aaKnown RBP13.54□□□□□ -0.24
CMTM3-209ENST00000565003 CICQ96RK0 1608 aaPredicted RBP13.53□□□□□ -0.24
CMTM3-209ENST00000565003 MYH14Q7Z406 1995 aaKnown RBP13.53□□□□□ -0.24
CMTM3-209ENST00000565003 RNMTO43148 476 aaKnown RBP13.53□□□□□ -0.24
CMTM3-209ENST00000565003 PELP1Q8IZL8 1130 aaKnown RBP13.53□□□□□ -0.24
CMTM3-209ENST00000565003 SLC52A2Q9HAB3 445 aa13.53□□□□□ -0.24
CMTM3-209ENST00000565003 RTCBQ9Y3I0 505 aaKnown RBP13.53□□□□□ -0.24
CMTM3-209ENST00000565003 YBX3P16989 372 aaKnown RBP eCLIP13.52□□□□□ -0.251e-6■■□□□ 12.5
CMTM3-209ENST00000565003 RC3H1Q5TC82 1133 aaKnown RBP13.52□□□□□ -0.25
CMTM3-209ENST00000565003 CD2APQ9Y5K6 639 aa13.52□□□□□ -0.25
CMTM3-209ENST00000565003 C4AP0C0L4 1744 aa13.52□□□□□ -0.25
CMTM3-209ENST00000565003 CHD4Q14839 1912 aa13.52□□□□□ -0.25
CMTM3-209ENST00000565003 RPS6KA4O75676 772 aa13.51□□□□□ -0.25
CMTM3-209ENST00000565003 TRAPPC3LQ5T215 181 aa13.51□□□□□ -0.25
CMTM3-209ENST00000565003 KCPQ6ZWJ8 1503 aa13.5□□□□□ -0.25
CMTM3-209ENST00000565003 ADRA2BP18089 450 aa13.5□□□□□ -0.25
CMTM3-209ENST00000565003 PPP2R1AP30153 589 aa13.5□□□□□ -0.25
CMTM3-209ENST00000565003 CRKLP46109 303 aaKnown RBP13.5□□□□□ -0.25
CMTM3-209ENST00000565003 SLC39A6Q13433 755 aa13.5□□□□□ -0.25
CMTM3-209ENST00000565003 ARHGEF1Q92888 912 aaKnown RBP13.5□□□□□ -0.25
CMTM3-209ENST00000565003 ZNF784Q8NCA9 323 aaPredicted RBP13.49□□□□□ -0.25
CMTM3-209ENST00000565003 CFAP53Q96M91 514 aa13.49□□□□□ -0.25
CMTM3-209ENST00000565003 GOLGB1Q14789 3259 aaKnown RBP13.49□□□□□ -0.25
CMTM3-209ENST00000565003 MMP10P09238 476 aa13.48□□□□□ -0.25
CMTM3-209ENST00000565003 GYS1P13807 737 aa13.48□□□□□ -0.25
CMTM3-209ENST00000565003 INTS5Q6P9B9 1019 aaKnown RBP13.48□□□□□ -0.25
CMTM3-209ENST00000565003 DNAJC10Q8IXB1 793 aa13.48□□□□□ -0.25
CMTM3-209ENST00000565003 RSPH6AQ9H0K4 717 aa13.48□□□□□ -0.25
CMTM3-209ENST00000565003 UBR2Q8IWV8 1755 aa13.48□□□□□ -0.25
CMTM3-209ENST00000565003 PRKAR2BP31323 418 aa13.47□□□□□ -0.25
CMTM3-209ENST00000565003 RFC4P35249 363 aa13.47□□□□□ -0.25
CMTM3-209ENST00000565003 IL17REQ8NFR9 667 aa13.47□□□□□ -0.25
CMTM3-209ENST00000565003 GAS2L2Q8NHY3 880 aa13.47□□□□□ -0.25
CMTM3-209ENST00000565003 PHACTR3Q96KR7 559 aa13.47□□□□□ -0.25
CMTM3-209ENST00000565003 GNAT3A8MTJ3 354 aa13.46□□□□□ -0.25
CMTM3-209ENST00000565003 NLGN1Q8N2Q7 840 aa13.46□□□□□ -0.25
CMTM3-209ENST00000565003 SRP68Q9UHB9 627 aaKnown RBP13.46□□□□□ -0.25
CMTM3-209ENST00000565003 KIF13BQ9NQT8 1826 aa13.46□□□□□ -0.26
CMTM3-209ENST00000565003 SIPA1L3O60292 1781 aaPredicted RBP13.45□□□□□ -0.26
CMTM3-209ENST00000565003 USP42Q9H9J4 1324 aaKnown RBP13.45□□□□□ -0.26
CMTM3-209ENST00000565003 CYP19A1P11511 503 aaPredicted RBP13.45□□□□□ -0.26
CMTM3-209ENST00000565003 CCDC87Q9NVE4 849 aa13.45□□□□□ -0.26
CMTM3-209ENST00000565003 WWC3Q9ULE0 1092 aa13.45□□□□□ -0.26
CMTM3-209ENST00000565003 C10orf71Q711Q0 1435 aa13.45□□□□□ -0.26
CMTM3-209ENST00000565003 CEMIPQ8WUJ3 1361 aa13.45□□□□□ -0.26
CMTM3-209ENST00000565003 KIAA1551Q9HCM1 1747 aa13.44□□□□□ -0.26
CMTM3-209ENST00000565003 PXDNLA1KZ92 1463 aa13.44□□□□□ -0.26
CMTM3-209ENST00000565003 GRIN3BO60391 1043 aa13.44□□□□□ -0.26
CMTM3-209ENST00000565003 U2AF1L5P0DN76 240 aaPredicted RBP13.44□□□□□ -0.26
CMTM3-209ENST00000565003 U2AF1Q01081 240 aaKnown RBP eCLIP13.44□□□□□ -0.26
CMTM3-209ENST00000565003 NUDCQ9Y266 331 aa13.44□□□□□ -0.26
CMTM3-209ENST00000565003 SOS1Q07889 1333 aaPredicted RBP13.43□□□□□ -0.26
CMTM3-209ENST00000565003 TEFQ10587 303 aa13.43□□□□□ -0.26
CMTM3-209ENST00000565003 FKBP8Q14318 412 aa13.43□□□□□ -0.26
CMTM3-209ENST00000565003 VSIG10Q8N0Z9 540 aa13.43□□□□□ -0.26
CMTM3-209ENST00000565003 ZBTB1Q9Y2K1 713 aa13.43□□□□□ -0.26
CMTM3-209ENST00000565003 ZNF790Q6PG37 636 aa13.42□□□□□ -0.26
CMTM3-209ENST00000565003 TTC5Q8N0Z6 440 aa13.42□□□□□ -0.26
CMTM3-209ENST00000565003 ZNF496Q96IT1 587 aaPredicted RBP13.42□□□□□ -0.26
CMTM3-209ENST00000565003 N4BP2Q86UW6 1770 aaPredicted RBP13.41□□□□□ -0.26
CMTM3-209ENST00000565003 FCHSD2O94868 740 aa13.41□□□□□ -0.26
CMTM3-209ENST00000565003 DDR1Q08345 913 aa13.41□□□□□ -0.26
CMTM3-209ENST00000565003 PARP3Q9Y6F1 533 aa13.41□□□□□ -0.26
CMTM3-209ENST00000565003 COL15A1P39059 1388 aa13.41□□□□□ -0.26
CMTM3-209ENST00000565003 HEG1Q9ULI3 1381 aa13.41□□□□□ -0.26
CMTM3-209ENST00000565003 USPL1Q5W0Q7 1092 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms