RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 TATDN2Q93075 761 aa7.43□□□□□ -1.22
PTPN9-204ENST00000564970 MIEF2Q96C03 454 aa7.43□□□□□ -1.22
PTPN9-204ENST00000564970 HOMER3Q9NSC5 361 aa7.43□□□□□ -1.22
PTPN9-204ENST00000564970 GNL3LQ9NVN8 582 aaKnown RBP7.43□□□□□ -1.22
PTPN9-204ENST00000564970 ZNF446Q9NWS9 450 aa7.43□□□□□ -1.22
PTPN9-204ENST00000564970 CHCHD3Q9NX63 227 aaKnown RBP7.43□□□□□ -1.22
PTPN9-204ENST00000564970 TBC1D2BQ9UPU7 963 aa7.43□□□□□ -1.22
PTPN9-204ENST00000564970 PLXNC1O60486 1568 aa7.42□□□□□ -1.22
PTPN9-204ENST00000564970 SAMD9Q5K651 1589 aa7.42□□□□□ -1.22
PTPN9-204ENST00000564970 IMPDH2P12268 514 aa7.42□□□□□ -1.22
PTPN9-204ENST00000564970 GCFC2P16383 781 aaKnown RBP7.42□□□□□ -1.22
PTPN9-204ENST00000564970 PAX7P23759 505 aa7.42□□□□□ -1.22
PTPN9-204ENST00000564970 ABCD1P33897 745 aa7.42□□□□□ -1.22
PTPN9-204ENST00000564970 PEX19P40855 299 aa7.42□□□□□ -1.22
PTPN9-204ENST00000564970 MRPL12P52815 198 aaKnown RBP7.42□□□□□ -1.22
PTPN9-204ENST00000564970 DDR1Q08345 913 aa7.42□□□□□ -1.22
PTPN9-204ENST00000564970 KANK4Q5T7N3 995 aaPredicted RBP7.42□□□□□ -1.22
PTPN9-204ENST00000564970 SDCCAG8Q86SQ7 713 aaPredicted RBP7.42□□□□□ -1.22
PTPN9-204ENST00000564970 ARMC2Q8NEN0 867 aa7.42□□□□□ -1.22
PTPN9-204ENST00000564970 CCDC26Q8TAB7 109 aa7.42□□□□□ -1.22
PTPN9-204ENST00000564970 ARHGEF1Q92888 912 aaKnown RBP7.42□□□□□ -1.22
PTPN9-204ENST00000564970 CCDC97Q96F63 343 aaPredicted RBP7.42□□□□□ -1.22
PTPN9-204ENST00000564970 BORCS6Q96GS4 357 aa7.42□□□□□ -1.22
PTPN9-204ENST00000564970 SRRTQ9BXP5 876 aaKnown RBP7.42□□□□□ -1.22
PTPN9-204ENST00000564970 TRIM6Q9C030 488 aaPredicted RBP7.42□□□□□ -1.22
PTPN9-204ENST00000564970 TOMM22Q9NS69 142 aa7.42□□□□□ -1.22
PTPN9-204ENST00000564970 KCND1Q9NSA2 647 aa7.42□□□□□ -1.22
PTPN9-204ENST00000564970 LMBRD1Q9NUN5 540 aa7.42□□□□□ -1.22
PTPN9-204ENST00000564970 CLIP2Q9UDT6 1046 aa7.42□□□□□ -1.22
PTPN9-204ENST00000564970 SNAPC4Q5SXM2 1469 aa7.42□□□□□ -1.22
PTPN9-204ENST00000564970 RAPGEF2Q9Y4G8 1499 aa7.42□□□□□ -1.22
PTPN9-204ENST00000564970 KINO60870 393 aaKnown RBP7.41□□□□□ -1.22
PTPN9-204ENST00000564970 H2AFXP16104 143 aaPredicted RBP7.41□□□□□ -1.22
PTPN9-204ENST00000564970 TUBB4BP68371 445 aa7.41□□□□□ -1.22
PTPN9-204ENST00000564970 SLC5A9Q2M3M2 681 aa7.41□□□□□ -1.22
PTPN9-204ENST00000564970 GBP6Q6ZN66 633 aa7.41□□□□□ -1.22
PTPN9-204ENST00000564970 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.41□□□□□ -1.22
PTPN9-204ENST00000564970 RBM12BQ8IXT5 1001 aaKnown RBP7.41□□□□□ -1.22
PTPN9-204ENST00000564970 NBPF15Q8N660 670 aa7.41□□□□□ -1.22
PTPN9-204ENST00000564970 ZBTB9Q96C00 473 aa7.41□□□□□ -1.22
PTPN9-204ENST00000564970 RMDN2Q96LZ7 410 aa7.41□□□□□ -1.22
PTPN9-204ENST00000564970 THUMPD2Q9BTF0 503 aaKnown RBP7.41□□□□□ -1.22
PTPN9-204ENST00000564970 MMTAG2Q9BU76 263 aaKnown RBP7.41□□□□□ -1.22
PTPN9-204ENST00000564970 UBXN6Q9BZV1 441 aa7.41□□□□□ -1.22
PTPN9-204ENST00000564970 RANBP17Q9H2T7 1088 aaKnown RBP7.41□□□□□ -1.22
PTPN9-204ENST00000564970 RWDD1Q9H446 243 aaPredicted RBP7.41□□□□□ -1.22
PTPN9-204ENST00000564970 BATF3Q9NR55 127 aa7.41□□□□□ -1.22
PTPN9-204ENST00000564970 ABCF2Q9UG63 623 aa7.41□□□□□ -1.22
PTPN9-204ENST00000564970 RPS6KL1Q9Y6S9 549 aa7.41□□□□□ -1.22
PTPN9-204ENST00000564970 ATXN2Q99700 1313 aaKnown RBP7.41□□□□□ -1.22
PTPN9-204ENST00000564970 PRXQ9BXM0 1461 aa7.41□□□□□ -1.22
PTPN9-204ENST00000564970 SHROOM2Q13796 1616 aa7.41□□□□□ -1.22
PTPN9-204ENST00000564970 PTPN23Q9H3S7 1636 aa7.41□□□□□ -1.22
PTPN9-204ENST00000564970 CFAP43Q8NDM7 1665 aa7.41□□□□□ -1.22
PTPN9-204ENST00000564970 CDKL5O76039 1030 aa7.4□□□□□ -1.22
PTPN9-204ENST00000564970 SASH1O94885 1247 aa7.4□□□□□ -1.22
PTPN9-204ENST00000564970 CYP2E1P05181 493 aaPredicted RBP7.4□□□□□ -1.22
PTPN9-204ENST00000564970 DSG3P32926 999 aa7.4□□□□□ -1.22
PTPN9-204ENST00000564970 GOLGA2Q08379 1002 aa7.4□□□□□ -1.22
PTPN9-204ENST00000564970 GRIK3Q13003 919 aa7.4□□□□□ -1.22
PTPN9-204ENST00000564970 MLECQ14165 292 aa7.4□□□□□ -1.22
PTPN9-204ENST00000564970 PDIA5Q14554 519 aa7.4□□□□□ -1.22
PTPN9-204ENST00000564970 TSGA10IPQ3SY00 556 aa7.4□□□□□ -1.22
PTPN9-204ENST00000564970 KMT5BQ4FZB7 885 aa7.4□□□□□ -1.22
PTPN9-204ENST00000564970 AMOTQ4VCS5 1084 aa7.4□□□□□ -1.22
PTPN9-204ENST00000564970 C1QTNF12Q5T7M4 302 aa7.4□□□□□ -1.22
PTPN9-204ENST00000564970 RBM26Q5T8P6 1007 aaKnown RBP7.4□□□□□ -1.22
PTPN9-204ENST00000564970 ARMCX6Q7L4S7 300 aa7.4□□□□□ -1.22
PTPN9-204ENST00000564970 TADA2BQ86TJ2 420 aa7.4□□□□□ -1.22
PTPN9-204ENST00000564970 PACS2Q86VP3 889 aa7.4□□□□□ -1.22
PTPN9-204ENST00000564970 RPUSD2Q8IZ73 545 aaKnown RBP7.4□□□□□ -1.22
PTPN9-204ENST00000564970 DRAXINQ8NBI3 349 aaPredicted RBP7.4□□□□□ -1.22
PTPN9-204ENST00000564970 MIPOL1Q8TD10 442 aa7.4□□□□□ -1.22
PTPN9-204ENST00000564970 CLUAP1Q96AJ1 413 aa7.4□□□□□ -1.22
PTPN9-204ENST00000564970 IQCGQ9H095 443 aaKnown RBP7.4□□□□□ -1.22
PTPN9-204ENST00000564970 KDM4CQ9H3R0 1056 aa7.4□□□□□ -1.22
PTPN9-204ENST00000564970 ZSCAN16Q9H4T2 348 aaPredicted RBP7.4□□□□□ -1.22
PTPN9-204ENST00000564970 SYNPO2Q9UMS6 1093 aa7.4□□□□□ -1.22
PTPN9-204ENST00000564970 SPAG9O60271 1321 aaKnown RBP7.4□□□□□ -1.22
PTPN9-204ENST00000564970 SYNRGQ9UMZ2 1314 aa7.4□□□□□ -1.22
PTPN9-204ENST00000564970 COL17A1Q9UMD9 1497 aaPredicted RBP7.4□□□□□ -1.22
PTPN9-204ENST00000564970 RUSC2Q8N2Y8 1516 aa7.4□□□□□ -1.22
PTPN9-204ENST00000564970 FHOD3Q2V2M9 1422 aa7.39□□□□□ -1.23
PTPN9-204ENST00000564970 PARD3Q8TEW0 1356 aa7.39□□□□□ -1.23
PTPN9-204ENST00000564970 EIF3CLB5ME19 914 aaKnown RBP7.39□□□□□ -1.23
PTPN9-204ENST00000564970 SLU7O95391 586 aaKnown RBP7.39□□□□□ -1.23
PTPN9-204ENST00000564970 ELF1P32519 619 aa7.39□□□□□ -1.23
PTPN9-204ENST00000564970 SLC8A3P57103 927 aa7.39□□□□□ -1.23
PTPN9-204ENST00000564970 RBM6P78332 1123 aaKnown RBP7.39□□□□□ -1.23
PTPN9-204ENST00000564970 FAM50AQ14320 339 aaKnown RBP7.39□□□□□ -1.23
PTPN9-204ENST00000564970 DNAJC21Q5F1R6 531 aaKnown RBP7.39□□□□□ -1.23
PTPN9-204ENST00000564970 C20orf194Q5TEA3 1177 aa7.39□□□□□ -1.23
PTPN9-204ENST00000564970 SPTY2D1Q68D10 685 aaPredicted RBP7.39□□□□□ -1.23
PTPN9-204ENST00000564970 KLHL10Q6JEL2 608 aa7.39□□□□□ -1.23
PTPN9-204ENST00000564970 TMCO3Q6UWJ1 677 aa7.39□□□□□ -1.23
PTPN9-204ENST00000564970 DDX46Q7L014 1031 aaKnown RBP7.39□□□□□ -1.23
PTPN9-204ENST00000564970 CCDC50Q8IVM0 306 aa7.39□□□□□ -1.23
PTPN9-204ENST00000564970 APLFQ8IW19 511 aaPredicted RBP7.39□□□□□ -1.23
PTPN9-204ENST00000564970 MPNDQ8N594 471 aa7.39□□□□□ -1.23
PTPN9-204ENST00000564970 RNF214Q8ND24 703 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 134.3 ms