RNA–Protein interactions for RNA: ENST00000564770.1

CDH11-210, Transcript of cadherin 11, humanhuman

TSL 3

Gene CDH11, Length 425 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-210ENST00000564770 KDM6AO15550 1401 aaPredicted RBP21.95■■□□□ 1.1
CDH11-210ENST00000564770 SSFA2P28290 1259 aa21.94■■□□□ 1.1
CDH11-210ENST00000564770 MYH14Q7Z406 1995 aaKnown RBP21.93■■□□□ 1.1
CDH11-210ENST00000564770 ATG3Q9NT62 314 aa21.93■■□□□ 1.1
CDH11-210ENST00000564770 VIRMAQ69YN4 1812 aaKnown RBP21.92■■□□□ 1.1
CDH11-210ENST00000564770 GRIN3BO60391 1043 aa21.92■■□□□ 1.1
CDH11-210ENST00000564770 HMGB2P26583 209 aaKnown RBP21.92■■□□□ 1.1
CDH11-210ENST00000564770 PANK3Q9H999 370 aa21.92■■□□□ 1.1
CDH11-210ENST00000564770 N4BP2Q86UW6 1770 aaPredicted RBP21.92■■□□□ 1.1
CDH11-210ENST00000564770 SENP3-EIF4A1A0A087X0R7 540 aa21.91■■□□□ 1.1
CDH11-210ENST00000564770 EIF4G2P78344 907 aaKnown RBP eCLIP21.91■■□□□ 1.1
CDH11-210ENST00000564770 SCN11AQ9UI33 1791 aa21.91■■□□□ 1.1
CDH11-210ENST00000564770 TJP1Q07157 1748 aa21.91■■□□□ 1.1
CDH11-210ENST00000564770 CICQ96RK0 1608 aaPredicted RBP21.91■■□□□ 1.1
CDH11-210ENST00000564770 ATP10DQ9P241 1426 aa21.9■■□□□ 1.1
CDH11-210ENST00000564770 GNPATO15228 680 aa21.9■■□□□ 1.1
CDH11-210ENST00000564770 GIGYF1O75420 1035 aaPredicted RBP21.9■■□□□ 1.1
CDH11-210ENST00000564770 ATP6V1AP38606 617 aa21.9■■□□□ 1.1
CDH11-210ENST00000564770 SLC4A9Q96Q91 983 aa21.9■■□□□ 1.1
CDH11-210ENST00000564770 ADCY9O60503 1353 aa21.89■■□□□ 1.1
CDH11-210ENST00000564770 BRCA1P38398 1863 aaKnown RBP21.88■■□□□ 1.09
CDH11-210ENST00000564770 WWC3Q9ULE0 1092 aa21.88■■□□□ 1.09
CDH11-210ENST00000564770 AEBP1Q8IUX7 1158 aa21.87■■□□□ 1.09
CDH11-210ENST00000564770 PXDNLA1KZ92 1463 aa21.85■■□□□ 1.09
CDH11-210ENST00000564770 ZNF530Q6P9A1 599 aaPredicted RBP21.84■■□□□ 1.09
CDH11-210ENST00000564770 ADAMTS7Q9UKP4 1686 aa21.84■■□□□ 1.09
CDH11-210ENST00000564770 C10orf71Q711Q0 1435 aa21.83■■□□□ 1.09
CDH11-210ENST00000564770 ERVV-2B6SEH9 535 aa21.83■■□□□ 1.09
CDH11-210ENST00000564770 DCAF5Q96JK2 942 aa21.83■■□□□ 1.09
CDH11-210ENST00000564770 MMP10P09238 476 aa21.81■■□□□ 1.08
CDH11-210ENST00000564770 PLEKHO1Q53GL0 409 aaPredicted RBP21.81■■□□□ 1.08
CDH11-210ENST00000564770 RBM42Q9BTD8 480 aaKnown RBP21.81■■□□□ 1.08
CDH11-210ENST00000564770 CNTNAP4Q9C0A0 1308 aa21.8■■□□□ 1.08
CDH11-210ENST00000564770 HSP90AB1P08238 724 aaKnown RBP21.8■■□□□ 1.08
CDH11-210ENST00000564770 MORC1Q86VD1 984 aa21.8■■□□□ 1.08
CDH11-210ENST00000564770 RTCBQ9Y3I0 505 aaKnown RBP21.79■■□□□ 1.08
CDH11-210ENST00000564770 MRC1P22897 1456 aa21.78■■□□□ 1.08
CDH11-210ENST00000564770 AMOTQ4VCS5 1084 aa21.78■■□□□ 1.08
CDH11-210ENST00000564770 CABP4P57796 275 aa21.77■■□□□ 1.08
CDH11-210ENST00000564770 SULT6B1Q6IMI4 303 aa21.77■■□□□ 1.08
CDH11-210ENST00000564770 ARFGEF1Q9Y6D6 1849 aa21.77■■□□□ 1.08
CDH11-210ENST00000564770 IL13P35225 146 aa21.76■■□□□ 1.07
CDH11-210ENST00000564770 TRAPPC3LQ5T215 181 aa21.76■■□□□ 1.07
CDH11-210ENST00000564770 RC3H1Q5TC82 1133 aaKnown RBP21.76■■□□□ 1.07
CDH11-210ENST00000564770 ARHGEF1Q92888 912 aaKnown RBP21.76■■□□□ 1.07
CDH11-210ENST00000564770 GYS1P13807 737 aa21.75■■□□□ 1.07
CDH11-210ENST00000564770 ADRA2BP18089 450 aa21.75■■□□□ 1.07
CDH11-210ENST00000564770 MTHFSP49914 203 aa21.75■■□□□ 1.07
CDH11-210ENST00000564770 AMER1Q5JTC6 1135 aaPredicted RBP21.75■■□□□ 1.07
CDH11-210ENST00000564770 CCER1Q8TC90 406 aaPredicted RBP21.75■■□□□ 1.07
CDH11-210ENST00000564770 ZNF526Q8TF50 670 aaPredicted RBP21.75■■□□□ 1.07
CDH11-210ENST00000564770 KIF7Q2M1P5 1343 aa21.75■■□□□ 1.07
CDH11-210ENST00000564770 UBR2Q8IWV8 1755 aa21.74■■□□□ 1.07
CDH11-210ENST00000564770 C1orf141Q5JVX7 400 aa21.74■■□□□ 1.07
CDH11-210ENST00000564770 GPBP1L1Q9HC44 474 aaPredicted RBP21.74■■□□□ 1.07
CDH11-210ENST00000564770 KNSTRNQ9Y448 316 aa21.74■■□□□ 1.07
CDH11-210ENST00000564770 PTCD1O75127 700 aaKnown RBP21.73■■□□□ 1.07
CDH11-210ENST00000564770 RPS6KA4O75676 772 aa21.73■■□□□ 1.07
CDH11-210ENST00000564770 NFATC2IPQ8NCF5 419 aa21.73■■□□□ 1.07
CDH11-210ENST00000564770 KCPQ6ZWJ8 1503 aa21.72■■□□□ 1.07
CDH11-210ENST00000564770 NLGN1Q8N2Q7 840 aa21.72■■□□□ 1.07
CDH11-210ENST00000564770 CRKLP46109 303 aaKnown RBP21.71■■□□□ 1.07
CDH11-210ENST00000564770 RFC4P35249 363 aa21.7■■□□□ 1.06
CDH11-210ENST00000564770 AFDNP55196 1824 aaKnown RBP21.7■■□□□ 1.06
CDH11-210ENST00000564770 A0A0G2JLW4 131 aa21.69■■□□□ 1.06
CDH11-210ENST00000564770 SRP68Q9UHB9 627 aaKnown RBP21.69■■□□□ 1.06
CDH11-210ENST00000564770 USP42Q9H9J4 1324 aaKnown RBP21.69■■□□□ 1.06
CDH11-210ENST00000564770 COL3A1P02461 1466 aaPredicted RBP21.69■■□□□ 1.06
CDH11-210ENST00000564770 TGFB2P61812 414 aa21.68■■□□□ 1.06
CDH11-210ENST00000564770 SIPA1L3O60292 1781 aaPredicted RBP21.68■■□□□ 1.06
CDH11-210ENST00000564770 DPEP1P16444 411 aa21.67■■□□□ 1.06
CDH11-210ENST00000564770 CCDC87Q9NVE4 849 aa21.67■■□□□ 1.06
CDH11-210ENST00000564770 BCS1LQ9Y276 419 aa21.67■■□□□ 1.06
CDH11-210ENST00000564770 NRXN2Q9P2S2 1712 aa21.66■■□□□ 1.06
CDH11-210ENST00000564770 HMOX1P09601 288 aa21.66■■□□□ 1.06
CDH11-210ENST00000564770 DDR1Q08345 913 aa21.66■■□□□ 1.06
CDH11-210ENST00000564770 AKAP4Q5JQC9 854 aa21.66■■□□□ 1.06
CDH11-210ENST00000564770 DLEC1Q9Y238 1755 aa21.66■■□□□ 1.06
CDH11-210ENST00000564770 FKBP8Q14318 412 aa21.65■■□□□ 1.06
CDH11-210ENST00000564770 INTS5Q6P9B9 1019 aaKnown RBP21.65■■□□□ 1.06
CDH11-210ENST00000564770 SLC52A2Q9HAB3 445 aa21.65■■□□□ 1.06
CDH11-210ENST00000564770 LGR6Q9HBX8 967 aa21.65■■□□□ 1.06
CDH11-210ENST00000564770 PARP3Q9Y6F1 533 aa21.65■■□□□ 1.06
CDH11-210ENST00000564770 KIF3CO14782 793 aa21.64■■□□□ 1.05
CDH11-210ENST00000564770 KCNA3P22001 575 aa21.64■■□□□ 1.05
CDH11-210ENST00000564770 DNAJC10Q8IXB1 793 aa21.64■■□□□ 1.05
CDH11-210ENST00000564770 SBF1O95248 1867 aa21.63■■□□□ 1.05
CDH11-210ENST00000564770 PER1O15534 1290 aaPredicted RBP21.63■■□□□ 1.05
CDH11-210ENST00000564770 SOS1Q07889 1333 aaPredicted RBP21.62■■□□□ 1.05
CDH11-210ENST00000564770 SLC39A6Q13433 755 aa21.62■■□□□ 1.05
CDH11-210ENST00000564770 SCN7AQ01118 1682 aa21.61■■□□□ 1.05
CDH11-210ENST00000564770 RNMTO43148 476 aaKnown RBP21.61■■□□□ 1.05
CDH11-210ENST00000564770 MTHFSDQ2M296 383 aaKnown RBP21.61■■□□□ 1.05
CDH11-210ENST00000564770 CC2D1BQ5T0F9 858 aaKnown RBP21.61■■□□□ 1.05
CDH11-210ENST00000564770 FCHSD2O94868 740 aa21.6■■□□□ 1.05
CDH11-210ENST00000564770 HSPA6P17066 643 aa21.6■■□□□ 1.05
CDH11-210ENST00000564770 COL15A1P39059 1388 aa21.6■■□□□ 1.05
CDH11-210ENST00000564770 POLRMTO00411 1230 aaKnown RBP21.58■■□□□ 1.05
CDH11-210ENST00000564770 CYP19A1P11511 503 aaPredicted RBP21.58■■□□□ 1.05
CDH11-210ENST00000564770 ARHGAP27Q6ZUM4 889 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms