RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 RHBDD1Q8TEB9 315 aa9.65□□□□□ -0.86
CHD9-212ENST00000564641 ALG2Q9H553 416 aa9.65□□□□□ -0.86
CHD9-212ENST00000564641 MBIPQ9NS73 344 aa9.65□□□□□ -0.86
CHD9-212ENST00000564641 INHAP05111 366 aa9.64□□□□□ -0.87
CHD9-212ENST00000564641 TLR1Q15399 786 aa9.64□□□□□ -0.87
CHD9-212ENST00000564641 NUCKS1Q9H1E3 243 aaKnown RBP9.64□□□□□ -0.87
CHD9-212ENST00000564641 RNF225M0QZC1 329 aaPredicted RBP9.63□□□□□ -0.87
CHD9-212ENST00000564641 ADAMTS2O95450 1211 aa9.63□□□□□ -0.87
CHD9-212ENST00000564641 CSB-PGBD3P0DP91 1061 aa9.63□□□□□ -0.87
CHD9-212ENST00000564641 GAS6Q14393 721 aa9.63□□□□□ -0.87
CHD9-212ENST00000564641 EML3Q32P44 896 aa9.63□□□□□ -0.87
CHD9-212ENST00000564641 ZNF385CQ66K41 422 aaPredicted RBP9.63□□□□□ -0.87
CHD9-212ENST00000564641 PGBD3Q8N328 593 aa9.63□□□□□ -0.87
CHD9-212ENST00000564641 NSFL1CQ9UNZ2 370 aaKnown RBP9.63□□□□□ -0.87
CHD9-212ENST00000564641 SCNN1DP51172 638 aa9.62□□□□□ -0.87
CHD9-212ENST00000564641 GDF10P55107 478 aa9.62□□□□□ -0.87
CHD9-212ENST00000564641 GTPBP3Q969Y2 492 aaKnown RBP9.62□□□□□ -0.87
CHD9-212ENST00000564641 POM121Q96HA1 1249 aa9.62□□□□□ -0.87
CHD9-212ENST00000564641 MAP3K10Q02779 954 aa9.61□□□□□ -0.87
CHD9-212ENST00000564641 C4orf17Q53FE4 359 aa9.61□□□□□ -0.87
CHD9-212ENST00000564641 CFHR5Q9BXR6 569 aa9.61□□□□□ -0.87
CHD9-212ENST00000564641 ENAMQ9NRM1 1142 aa9.61□□□□□ -0.87
CHD9-212ENST00000564641 ADAMTS8Q9UP79 889 aa9.61□□□□□ -0.87
CHD9-212ENST00000564641 PHF24Q9UPV7 400 aa9.61□□□□□ -0.87
CHD9-212ENST00000564641 NOD1Q9Y239 953 aa9.61□□□□□ -0.87
CHD9-212ENST00000564641 SKIP12755 728 aa9.6□□□□□ -0.87
CHD9-212ENST00000564641 PHKA2P46019 1235 aa9.6□□□□□ -0.87
CHD9-212ENST00000564641 C1orf216Q8TAB5 229 aa9.6□□□□□ -0.87
CHD9-212ENST00000564641 GPR25O00155 361 aa9.59□□□□□ -0.87
CHD9-212ENST00000564641 SMTNP53814 917 aa9.59□□□□□ -0.87
CHD9-212ENST00000564641 EFHC2Q5JST6 749 aa9.59□□□□□ -0.87
CHD9-212ENST00000564641 SLC4A9Q96Q91 983 aa9.59□□□□□ -0.87
CHD9-212ENST00000564641 NIFKQ9BYG3 293 aaKnown RBP9.59□□□□□ -0.87
CHD9-212ENST00000564641 LRRC4BQ9NT99 713 aa9.59□□□□□ -0.87
CHD9-212ENST00000564641 PIK3CDO00329 1044 aa9.58□□□□□ -0.88
CHD9-212ENST00000564641 BACH1O14867 736 aa9.58□□□□□ -0.88
CHD9-212ENST00000564641 ARHGEF15O94989 841 aa9.58□□□□□ -0.88
CHD9-212ENST00000564641 MX2P20592 715 aa9.58□□□□□ -0.88
CHD9-212ENST00000564641 KCNMA1Q12791 1236 aa9.58□□□□□ -0.88
CHD9-212ENST00000564641 GPAMQ9HCL2 828 aa9.58□□□□□ -0.88
CHD9-212ENST00000564641 TBC1D9Q6ZT07 1266 aa9.57□□□□□ -0.88
CHD9-212ENST00000564641 WHAMMQ8TF30 809 aa9.57□□□□□ -0.88
CHD9-212ENST00000564641 PCDHGA11Q9Y5H2 935 aa9.57□□□□□ -0.88
CHD9-212ENST00000564641 IGF1RP08069 1367 aa9.57□□□□□ -0.88
CHD9-212ENST00000564641 CDK2AP1O14519 115 aa9.56□□□□□ -0.88
CHD9-212ENST00000564641 STAU1O95793 577 aaKnown RBP9.56□□□□□ -0.88
CHD9-212ENST00000564641 MSX1P28360 303 aa9.56□□□□□ -0.88
CHD9-212ENST00000564641 MAP2K3P46734 347 aa9.56□□□□□ -0.88
CHD9-212ENST00000564641 TRIM50Q86XT4 487 aa9.56□□□□□ -0.88
CHD9-212ENST00000564641 CRISPLD1Q9H336 500 aa9.56□□□□□ -0.88
CHD9-212ENST00000564641 A6NJY4 79 aa9.55□□□□□ -0.88
CHD9-212ENST00000564641 USP17L5A8MUK1 530 aa9.55□□□□□ -0.88
CHD9-212ENST00000564641 CELA2BP08218 269 aaPredicted RBP9.55□□□□□ -0.88
CHD9-212ENST00000564641 MARSP56192 900 aaKnown RBP9.55□□□□□ -0.88
CHD9-212ENST00000564641 NCOA4Q13772 614 aa9.55□□□□□ -0.88
CHD9-212ENST00000564641 MTFR1Q15390 333 aa9.55□□□□□ -0.88
CHD9-212ENST00000564641 LYPD4Q6UWN0 246 aa9.55□□□□□ -0.88
CHD9-212ENST00000564641 SCARF2Q96GP6 870 aaPredicted RBP9.55□□□□□ -0.88
CHD9-212ENST00000564641 TMEM229AB2RXF0 380 aa9.54□□□□□ -0.88
CHD9-212ENST00000564641 GTF2IP78347 998 aa9.54□□□□□ -0.88
CHD9-212ENST00000564641 NBPF1Q3BBV0 1214 aa9.54□□□□□ -0.88
CHD9-212ENST00000564641 FIGNL1Q6PIW4 674 aa9.54□□□□□ -0.88
CHD9-212ENST00000564641 PLEKHM2Q8IWE5 1019 aa9.54□□□□□ -0.88
CHD9-212ENST00000564641 ATXN7L1Q9ULK2 861 aaPredicted RBP9.54□□□□□ -0.88
CHD9-212ENST00000564641 BCRP11274 1271 aa9.53□□□□□ -0.88
CHD9-212ENST00000564641 PLA2G4AP47712 749 aa9.53□□□□□ -0.88
CHD9-212ENST00000564641 ATP1A2P50993 1020 aa9.53□□□□□ -0.88
CHD9-212ENST00000564641 PSME1Q06323 249 aa9.53□□□□□ -0.88
CHD9-212ENST00000564641 HDGFL1Q5TGJ6 251 aa9.53□□□□□ -0.88
CHD9-212ENST00000564641 RUBCNLQ9H714 662 aa9.53□□□□□ -0.88
CHD9-212ENST00000564641 SERTAD1Q9UHV2 236 aa9.53□□□□□ -0.88
CHD9-212ENST00000564641 NLRP8Q86W28 1048 aa9.52□□□□□ -0.89
CHD9-212ENST00000564641 POM121CA8CG34 1229 aa9.51□□□□□ -0.89
CHD9-212ENST00000564641 THBS1P07996 1170 aa9.51□□□□□ -0.89
CHD9-212ENST00000564641 TATP17735 454 aaPredicted RBP9.51□□□□□ -0.89
CHD9-212ENST00000564641 UBAP2LQ14157 1087 aaKnown RBP9.51□□□□□ -0.89
CHD9-212ENST00000564641 AIDAQ96BJ3 306 aa9.51□□□□□ -0.89
CHD9-212ENST00000564641 ZDHHC3Q9NYG2 299 aa9.51□□□□□ -0.89
CHD9-212ENST00000564641 IQSEC3Q9UPP2 1182 aaPredicted RBP9.51□□□□□ -0.89
CHD9-212ENST00000564641 KANK3Q6NY19 840 aa9.5□□□□□ -0.89
CHD9-212ENST00000564641 TMEM151AQ8N4L1 468 aa9.5□□□□□ -0.89
CHD9-212ENST00000564641 ATP9BO43861 1147 aa9.49□□□□□ -0.89
CHD9-212ENST00000564641 RASSF7Q02833 373 aa9.49□□□□□ -0.89
CHD9-212ENST00000564641 PROSER2Q86WR7 435 aaPredicted RBP9.49□□□□□ -0.89
CHD9-212ENST00000564641 ADAMTS19Q8TE59 1207 aa9.49□□□□□ -0.89
CHD9-212ENST00000564641 ACDQ96AP0 544 aa9.49□□□□□ -0.89
CHD9-212ENST00000564641 OXCT2Q9BYC2 517 aaPredicted RBP9.49□□□□□ -0.89
CHD9-212ENST00000564641 CABP1Q9NZU7 370 aa9.49□□□□□ -0.89
CHD9-212ENST00000564641 SCHIP1Q9P0W5 487 aaPredicted RBP9.49□□□□□ -0.89
CHD9-212ENST00000564641 GDF2Q9UK05 429 aaPredicted RBP9.49□□□□□ -0.89
CHD9-212ENST00000564641 USP17L3A6NCW0 530 aa9.48□□□□□ -0.89
CHD9-212ENST00000564641 USP17L4A6NCW7 530 aa9.48□□□□□ -0.89
CHD9-212ENST00000564641 GDF11O95390 407 aa9.48□□□□□ -0.89
CHD9-212ENST00000564641 ATP4AP20648 1035 aa9.48□□□□□ -0.89
CHD9-212ENST00000564641 USP17L2Q6R6M4 530 aa9.48□□□□□ -0.89
CHD9-212ENST00000564641 USP17L1Q7RTZ2 530 aa9.48□□□□□ -0.89
CHD9-212ENST00000564641 ZNF295-AS1Q8N0V1 137 aa9.48□□□□□ -0.89
CHD9-212ENST00000564641 DEPDC4Q8N2C3 294 aa9.48□□□□□ -0.89
CHD9-212ENST00000564641 NDFIP2Q9NV92 336 aa9.48□□□□□ -0.89
CHD9-212ENST00000564641 ZNF358Q9NW07 568 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms