RNA–Protein interactions for RNA: ENST00000564600.6

CHD9-211, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-211ENST00000564600 K7ELQ4 463 aaPredicted RBP7.05□□□□□ -1.28
CHD9-211ENST00000564600 F11P03951 625 aa7.05□□□□□ -1.28
CHD9-211ENST00000564600 GRIN2CQ14957 1233 aa7.05□□□□□ -1.28
CHD9-211ENST00000564600 GMCL1Q96IK5 515 aa7.05□□□□□ -1.28
CHD9-211ENST00000564600 SPATA31C2B4DYI2 1134 aa7.04□□□□□ -1.28
CHD9-211ENST00000564600 C2CD2LO14523 706 aa7.04□□□□□ -1.28
CHD9-211ENST00000564600 CYP2U1Q7Z449 544 aa7.04□□□□□ -1.28
CHD9-211ENST00000564600 TRAK2O60296 914 aa7.03□□□□□ -1.28
CHD9-211ENST00000564600 CENPCQ03188 943 aa7.03□□□□□ -1.28
CHD9-211ENST00000564600 BANK1Q8NDB2 785 aa7.03□□□□□ -1.28
CHD9-211ENST00000564600 CNKSR1Q969H4 720 aa7.03□□□□□ -1.28
CHD9-211ENST00000564600 ABHD17AQ96GS6 310 aa7.03□□□□□ -1.28
CHD9-211ENST00000564600 CTBSQ01459 385 aa7.02□□□□□ -1.29
CHD9-211ENST00000564600 UBAP2LQ14157 1087 aaKnown RBP7.02□□□□□ -1.29
CHD9-211ENST00000564600 Q8N3U1 123 aa7.02□□□□□ -1.29
CHD9-211ENST00000564600 EDARADDQ8WWZ3 215 aa7.02□□□□□ -1.29
CHD9-211ENST00000564600 HOXB4P17483 251 aaPredicted RBP7.01□□□□□ -1.29
CHD9-211ENST00000564600 AMPD1P23109 780 aa7.01□□□□□ -1.29
CHD9-211ENST00000564600 TSGA10IPQ3SY00 556 aa7.01□□□□□ -1.29
CHD9-211ENST00000564600 C4orf17Q53FE4 359 aa7.01□□□□□ -1.29
CHD9-211ENST00000564600 CCDC85AQ96PX6 553 aaPredicted RBP7.01□□□□□ -1.29
CHD9-211ENST00000564600 NSFL1CQ9UNZ2 370 aaKnown RBP7.01□□□□□ -1.29
CHD9-211ENST00000564600 MAP2K3P46734 347 aa7□□□□□ -1.29
CHD9-211ENST00000564600 ZSCAN10Q96SZ4 725 aaPredicted RBP7□□□□□ -1.29
CHD9-211ENST00000564600 GGA1Q9UJY5 639 aa7□□□□□ -1.29
CHD9-211ENST00000564600 MKL2Q9ULH7 1088 aa7□□□□□ -1.29
CHD9-211ENST00000564600 TBC1D2BQ9UPU7 963 aa7□□□□□ -1.29
CHD9-211ENST00000564600 BMP4P12644 408 aa6.99□□□□□ -1.29
CHD9-211ENST00000564600 MSX1P28360 303 aa6.99□□□□□ -1.29
CHD9-211ENST00000564600 NR1H3Q13133 447 aa6.99□□□□□ -1.29
CHD9-211ENST00000564600 ESYT1Q9BSJ8 1104 aa6.99□□□□□ -1.29
CHD9-211ENST00000564600 ESF1Q9H501 851 aaKnown RBP6.99□□□□□ -1.29
CHD9-211ENST00000564600 C1QTNF9BB2RNN3 333 aa6.98□□□□□ -1.29
CHD9-211ENST00000564600 BNIP3LO60238 219 aa6.98□□□□□ -1.29
CHD9-211ENST00000564600 ITGB7P26010 798 aa6.98□□□□□ -1.29
CHD9-211ENST00000564600 RNF20Q5VTR2 975 aa6.98□□□□□ -1.29
CHD9-211ENST00000564600 TMEM214Q6NUQ4 689 aaKnown RBP6.98□□□□□ -1.29
CHD9-211ENST00000564600 LINC00114Q6XXX2 140 aa6.98□□□□□ -1.29
CHD9-211ENST00000564600 CFHR5Q9BXR6 569 aa6.98□□□□□ -1.29
CHD9-211ENST00000564600 KRTAP4-8Q9BYQ9 185 aa6.98□□□□□ -1.29
CHD9-211ENST00000564600 FHDC1Q9C0D6 1143 aaPredicted RBP6.98□□□□□ -1.29
CHD9-211ENST00000564600 HCN2Q9UL51 889 aa6.98□□□□□ -1.29
CHD9-211ENST00000564600 CHRNA4P43681 627 aa6.97□□□□□ -1.29
CHD9-211ENST00000564600 HRH3Q9Y5N1 445 aa6.97□□□□□ -1.29
CHD9-211ENST00000564600 NDUFB9Q9Y6M9 179 aa6.97□□□□□ -1.29
CHD9-211ENST00000564600 A0A1B0GTH6 734 aa6.96□□□□□ -1.3
CHD9-211ENST00000564600 SOCS7O14512 581 aa6.96□□□□□ -1.3
CHD9-211ENST00000564600 IRF5Q13568 498 aa6.96□□□□□ -1.3
CHD9-211ENST00000564600 WDR44Q5JSH3 913 aa6.96□□□□□ -1.3
CHD9-211ENST00000564600 CD163Q86VB7 1156 aa6.96□□□□□ -1.3
CHD9-211ENST00000564600 NEURL1BA8MQ27 555 aa6.95□□□□□ -1.3
CHD9-211ENST00000564600 GNRH1P01148 92 aa6.95□□□□□ -1.3
CHD9-211ENST00000564600 FGFR3P22607 806 aa6.95□□□□□ -1.3
CHD9-211ENST00000564600 MCM6Q14566 821 aa6.95□□□□□ -1.3
CHD9-211ENST00000564600 ETNK1Q9HBU6 452 aa6.95□□□□□ -1.3
CHD9-211ENST00000564600 LRRC4BQ9NT99 713 aa6.95□□□□□ -1.3
CHD9-211ENST00000564600 CSB-PGBD3P0DP91 1061 aa6.94□□□□□ -1.3
CHD9-211ENST00000564600 PLA2G4AP47712 749 aa6.94□□□□□ -1.3
CHD9-211ENST00000564600 DOC2BQ14184 412 aa6.94□□□□□ -1.3
CHD9-211ENST00000564600 GNASQ5JWF2 1037 aa6.94□□□□□ -1.3
CHD9-211ENST00000564600 PGBD3Q8N328 593 aa6.94□□□□□ -1.3
CHD9-211ENST00000564600 GOLGA6L1Q8N7Z2 621 aa6.94□□□□□ -1.3
CHD9-211ENST00000564600 XAGE2Q96GT9 111 aa6.94□□□□□ -1.3
CHD9-211ENST00000564600 BTBD6Q96KE9 485 aa6.94□□□□□ -1.3
CHD9-211ENST00000564600 GDPD2Q9HCC8 539 aa6.94□□□□□ -1.3
CHD9-211ENST00000564600 PHF24Q9UPV7 400 aa6.94□□□□□ -1.3
CHD9-211ENST00000564600 DCDC2BA2VCK2 349 aa6.93□□□□□ -1.3
CHD9-211ENST00000564600 NDFIP2Q9NV92 336 aa6.93□□□□□ -1.3
CHD9-211ENST00000564600 CEP126Q9P2H0 1117 aa6.93□□□□□ -1.3
CHD9-211ENST00000564600 GDF2Q9UK05 429 aaPredicted RBP6.93□□□□□ -1.3
CHD9-211ENST00000564600 MYCP01106 439 aaPredicted RBP6.92□□□□□ -1.3
CHD9-211ENST00000564600 CD33P20138 364 aa6.92□□□□□ -1.3
CHD9-211ENST00000564600 TLR1Q15399 786 aa6.92□□□□□ -1.3
CHD9-211ENST00000564600 OXLD1Q5BKU9 147 aa6.92□□□□□ -1.3
CHD9-211ENST00000564600 EFHC2Q5JST6 749 aa6.92□□□□□ -1.3
CHD9-211ENST00000564600 POM121Q96HA1 1249 aa6.92□□□□□ -1.3
CHD9-211ENST00000564600 SEMA6BQ9H3T3 888 aa6.92□□□□□ -1.3
CHD9-211ENST00000564600 KLF15Q9UIH9 416 aa6.92□□□□□ -1.3
CHD9-211ENST00000564600 ATXN7L1Q9ULK2 861 aaPredicted RBP6.92□□□□□ -1.3
CHD9-211ENST00000564600 EPXP11678 715 aa6.91□□□□□ -1.3
CHD9-211ENST00000564600 DGKGP49619 791 aa6.91□□□□□ -1.3
CHD9-211ENST00000564600 SLCO4C1Q6ZQN7 724 aa6.91□□□□□ -1.3
CHD9-211ENST00000564600 RNF135Q8IUD6 432 aa6.91□□□□□ -1.3
CHD9-211ENST00000564600 TRIM52Q96A61 297 aa6.91□□□□□ -1.3
CHD9-211ENST00000564600 ZCCHC2Q9C0B9 1178 aaKnown RBP6.91□□□□□ -1.3
CHD9-211ENST00000564600 DNAAF2Q9NVR5 837 aaKnown RBP6.91□□□□□ -1.3
CHD9-211ENST00000564600 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.9□□□□□ -1.3
CHD9-211ENST00000564600 GNB5O14775 395 aa6.9□□□□□ -1.3
CHD9-211ENST00000564600 GTF2E1P29083 439 aaPredicted RBP6.9□□□□□ -1.3
CHD9-211ENST00000564600 ABL2P42684 1182 aa6.9□□□□□ -1.3
CHD9-211ENST00000564600 AIDAQ96BJ3 306 aa6.9□□□□□ -1.3
CHD9-211ENST00000564600 PSMG3-AS1Q96PY0 264 aa6.9□□□□□ -1.3
CHD9-211ENST00000564600 ATP4AP20648 1035 aa6.89□□□□□ -1.31
CHD9-211ENST00000564600 PCBP4P57723 403 aaKnown RBP6.89□□□□□ -1.31
CHD9-211ENST00000564600 VAC14Q08AM6 782 aa6.89□□□□□ -1.31
CHD9-211ENST00000564600 TMEM132AQ24JP5 1023 aa6.89□□□□□ -1.31
CHD9-211ENST00000564600 CHSY3Q70JA7 882 aa6.89□□□□□ -1.31
CHD9-211ENST00000564600 FCHSD1Q86WN1 690 aa6.89□□□□□ -1.31
CHD9-211ENST00000564600 RHBDD1Q8TEB9 315 aa6.89□□□□□ -1.31
CHD9-211ENST00000564600 COG6Q9Y2V7 657 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms