RNA–Protein interactions for RNA: ENST00000563955.5

KCTD13-204, Transcript of potassium channel tetramerization domain containing 13, humanhuman

TSL 3

Gene KCTD13, Length 806 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCTD13-204ENST00000563955 LINC00116Q8NCU8 138 aa20.48■□□□□ 0.87
KCTD13-204ENST00000563955 RAPGEF4Q8WZA2 1011 aa20.47■□□□□ 0.87
KCTD13-204ENST00000563955 TESK2Q96S53 571 aa20.47■□□□□ 0.87
KCTD13-204ENST00000563955 KDM2BQ8NHM5 1336 aa20.47■□□□□ 0.87
KCTD13-204ENST00000563955 TIAM2Q8IVF5 1701 aa20.47■□□□□ 0.87
KCTD13-204ENST00000563955 ST20-MTHFSA0A0A6YYL1 179 aa20.45■□□□□ 0.86
KCTD13-204ENST00000563955 FCHSD2O94868 740 aa20.45■□□□□ 0.86
KCTD13-204ENST00000563955 FBLN1P23142 703 aa20.45■□□□□ 0.86
KCTD13-204ENST00000563955 KIF20BQ96Q89 1820 aa20.45■□□□□ 0.86
KCTD13-204ENST00000563955 MYH14Q7Z406 1995 aaKnown RBP20.45■□□□□ 0.86
KCTD13-204ENST00000563955 GNPATO15228 680 aa20.44■□□□□ 0.86
KCTD13-204ENST00000563955 CYP27B1O15528 508 aa20.44■□□□□ 0.86
KCTD13-204ENST00000563955 DPEP1P16444 411 aa20.44■□□□□ 0.86
KCTD13-204ENST00000563955 TATP17735 454 aaPredicted RBP20.44■□□□□ 0.86
KCTD13-204ENST00000563955 SMG6Q86US8 1419 aaKnown RBP20.44■□□□□ 0.86
KCTD13-204ENST00000563955 SLC24A1O60721 1099 aa20.43■□□□□ 0.86
KCTD13-204ENST00000563955 SMC1BQ8NDV3 1235 aa20.43■□□□□ 0.86
KCTD13-204ENST00000563955 LOC102724428A0A0B4J2F2 783 aa20.42■□□□□ 0.86
KCTD13-204ENST00000563955 SIK1P57059 783 aa20.42■□□□□ 0.86
KCTD13-204ENST00000563955 PIGBQ92521 554 aa20.42■□□□□ 0.86
KCTD13-204ENST00000563955 COG3Q96JB2 828 aa20.42■□□□□ 0.86
KCTD13-204ENST00000563955 RRAGCQ9HB90 399 aa20.42■□□□□ 0.86
KCTD13-204ENST00000563955 ITPK1Q13572 414 aa20.41■□□□□ 0.86
KCTD13-204ENST00000563955 DLEC1Q9Y238 1755 aa20.41■□□□□ 0.86
KCTD13-204ENST00000563955 KCNA3P22001 575 aa20.39■□□□□ 0.85
KCTD13-204ENST00000563955 RNF181Q9P0P0 153 aa20.39■□□□□ 0.85
KCTD13-204ENST00000563955 TRIM26Q12899 539 aaPredicted RBP20.38■□□□□ 0.85
KCTD13-204ENST00000563955 DCAF5Q96JK2 942 aa20.38■□□□□ 0.85
KCTD13-204ENST00000563955 CCDC87Q9NVE4 849 aa20.38■□□□□ 0.85
KCTD13-204ENST00000563955 ANKRD26Q9UPS8 1709 aa20.37■□□□□ 0.85
KCTD13-204ENST00000563955 RRS1Q15050 365 aaKnown RBP20.37■□□□□ 0.85
KCTD13-204ENST00000563955 DICER1Q9UPY3 1922 aaKnown RBP20.37■□□□□ 0.85
KCTD13-204ENST00000563955 NLGN1Q8N2Q7 840 aa20.36■□□□□ 0.85
KCTD13-204ENST00000563955 AFDNP55196 1824 aaKnown RBP20.36■□□□□ 0.85
KCTD13-204ENST00000563955 NCAPD2Q15021 1401 aa20.36■□□□□ 0.85
KCTD13-204ENST00000563955 INSRP06213 1382 aa20.35■□□□□ 0.85
KCTD13-204ENST00000563955 KDRP35968 1356 aa20.35■□□□□ 0.85
KCTD13-204ENST00000563955 TMF1P82094 1093 aa20.35■□□□□ 0.85
KCTD13-204ENST00000563955 NKX1-1Q15270 411 aaPredicted RBP20.35■□□□□ 0.85
KCTD13-204ENST00000563955 ATP6V1AP38606 617 aa20.34■□□□□ 0.85
KCTD13-204ENST00000563955 KDM6AO15550 1401 aaPredicted RBP20.34■□□□□ 0.85
KCTD13-204ENST00000563955 VIRMAQ69YN4 1812 aaKnown RBP20.33■□□□□ 0.85
KCTD13-204ENST00000563955 PIM2Q9P1W9 311 aa20.33■□□□□ 0.85
KCTD13-204ENST00000563955 ASAP1Q9ULH1 1129 aa20.33■□□□□ 0.85
KCTD13-204ENST00000563955 GYS1P13807 737 aa20.32■□□□□ 0.84
KCTD13-204ENST00000563955 TRAPPC3LQ5T215 181 aa20.32■□□□□ 0.84
KCTD13-204ENST00000563955 ZC3H4Q9UPT8 1303 aaKnown RBP20.31■□□□□ 0.84
KCTD13-204ENST00000563955 DALRD3Q5D0E6 543 aaKnown RBP20.31■□□□□ 0.84
KCTD13-204ENST00000563955 TMOD3Q9NYL9 352 aa20.31■□□□□ 0.84
KCTD13-204ENST00000563955 RTCBQ9Y3I0 505 aaKnown RBP20.31■□□□□ 0.84
KCTD13-204ENST00000563955 PARP3Q9Y6F1 533 aa20.31■□□□□ 0.84
KCTD13-204ENST00000563955 ADAMTS7Q9UKP4 1686 aa20.31■□□□□ 0.84
KCTD13-204ENST00000563955 FLT4P35916 1363 aa20.31■□□□□ 0.84
KCTD13-204ENST00000563955 HSP90AB2PQ58FF8 381 aa20.3■□□□□ 0.84
KCTD13-204ENST00000563955 FYB1O15117 783 aa20.29■□□□□ 0.84
KCTD13-204ENST00000563955 ADRA2BP18089 450 aa20.29■□□□□ 0.84
KCTD13-204ENST00000563955 ARHGEF1Q92888 912 aaKnown RBP20.29■□□□□ 0.84
KCTD13-204ENST00000563955 KIF24Q5T7B8 1368 aa20.29■□□□□ 0.84
KCTD13-204ENST00000563955 TJP1Q07157 1748 aa20.27■□□□□ 0.84
KCTD13-204ENST00000563955 VEGFAP15692 232 aaPredicted RBP20.27■□□□□ 0.84
KCTD13-204ENST00000563955 ATG3Q9NT62 314 aa20.27■□□□□ 0.84
KCTD13-204ENST00000563955 NRXN2Q9P2S2 1712 aa20.27■□□□□ 0.83
KCTD13-204ENST00000563955 GGNBP2Q9H3C7 697 aa20.26■□□□□ 0.83
KCTD13-204ENST00000563955 CNTNAP4Q9C0A0 1308 aa20.26■□□□□ 0.83
KCTD13-204ENST00000563955 CDCA8Q53HL2 280 aa20.25■□□□□ 0.83
KCTD13-204ENST00000563955 RC3H1Q5TC82 1133 aaKnown RBP20.25■□□□□ 0.83
KCTD13-204ENST00000563955 SLC4A9Q96Q91 983 aa20.25■□□□□ 0.83
KCTD13-204ENST00000563955 GLTPD2A6NH11 291 aa20.24■□□□□ 0.83
KCTD13-204ENST00000563955 RFC4P35249 363 aa20.24■□□□□ 0.83
KCTD13-204ENST00000563955 RASSF7Q02833 373 aa20.24■□□□□ 0.83
KCTD13-204ENST00000563955 SPG7Q9UQ90 795 aa20.24■□□□□ 0.83
KCTD13-204ENST00000563955 FER1L6Q2WGJ9 1857 aa20.24■□□□□ 0.83
KCTD13-204ENST00000563955 FOXN1O15353 648 aa20.23■□□□□ 0.83
KCTD13-204ENST00000563955 CHRNA5P30532 468 aa20.23■□□□□ 0.83
KCTD13-204ENST00000563955 PRDM10Q9NQV6 1147 aa20.23■□□□□ 0.83
KCTD13-204ENST00000563955 RPS6KA4O75676 772 aa20.22■□□□□ 0.83
KCTD13-204ENST00000563955 DDR1Q08345 913 aa20.22■□□□□ 0.83
KCTD13-204ENST00000563955 PCDH10Q9P2E7 1040 aa20.22■□□□□ 0.83
KCTD13-204ENST00000563955 TIMELESSQ9UNS1 1208 aa20.21■□□□□ 0.83
KCTD13-204ENST00000563955 PHKG2P15735 406 aa20.2■□□□□ 0.82
KCTD13-204ENST00000563955 LMNB1P20700 586 aa20.2■□□□□ 0.82
KCTD13-204ENST00000563955 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.2■□□□□ 0.82
KCTD13-204ENST00000563955 MKRN1Q9UHC7 482 aaKnown RBP20.2■□□□□ 0.82
KCTD13-204ENST00000563955 CACNA1SQ13698 1873 aa20.2■□□□□ 0.82
KCTD13-204ENST00000563955 POTECB2RU33 542 aa20.19■□□□□ 0.82
KCTD13-204ENST00000563955 CREBZFQ9NS37 354 aa20.19■□□□□ 0.82
KCTD13-204ENST00000563955 FKBP8Q14318 412 aa20.18■□□□□ 0.82
KCTD13-204ENST00000563955 FAM161AQ3B820 660 aa20.18■□□□□ 0.82
KCTD13-204ENST00000563955 IFNL2Q8IZJ0 200 aa20.18■□□□□ 0.82
KCTD13-204ENST00000563955 CARD14Q9BXL6 1004 aa20.18■□□□□ 0.82
KCTD13-204ENST00000563955 ANKRD31Q8N7Z5 1873 aa20.18■□□□□ 0.82
KCTD13-204ENST00000563955 RBM42Q9BTD8 480 aaKnown RBP20.17■□□□□ 0.82
KCTD13-204ENST00000563955 SRP68Q9UHB9 627 aaKnown RBP20.17■□□□□ 0.82
KCTD13-204ENST00000563955 USP42Q9H9J4 1324 aaKnown RBP20.17■□□□□ 0.82
KCTD13-204ENST00000563955 SCN4AP35499 1836 aa20.16■□□□□ 0.82
KCTD13-204ENST00000563955 CNTNAP1P78357 1384 aa20.16■□□□□ 0.82
KCTD13-204ENST00000563955 EMILIN1Q9Y6C2 1016 aa20.15■□□□□ 0.82
KCTD13-204ENST00000563955 COL11A2P13942 1736 aaPredicted RBP20.14■□□□□ 0.81
KCTD13-204ENST00000563955 POLRMTO00411 1230 aaKnown RBP20.14■□□□□ 0.81
KCTD13-204ENST00000563955 CTCFP49711 727 aaPredicted RBP20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms