RNA–Protein interactions for RNA: ENST00000563919.1

SCAPER-209, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 4

Gene SCAPER, Length 641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-209ENST00000563919 KIF13BQ9NQT8 1826 aa20.58■□□□□ 0.89
SCAPER-209ENST00000563919 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.58■□□□□ 0.896e-7■■■■■ 27.6
SCAPER-209ENST00000563919 A0A0G2JLW4 131 aa20.57■□□□□ 0.88
SCAPER-209ENST00000563919 BCS1LQ9Y276 419 aa20.57■□□□□ 0.88
SCAPER-209ENST00000563919 KIAA1551Q9HCM1 1747 aa20.56■□□□□ 0.88
SCAPER-209ENST00000563919 ATG3Q9NT62 314 aa20.56■□□□□ 0.88
SCAPER-209ENST00000563919 N4BP2Q86UW6 1770 aaPredicted RBP20.56■□□□□ 0.88
SCAPER-209ENST00000563919 TRAPPC3LQ5T215 181 aa20.55■□□□□ 0.88
SCAPER-209ENST00000563919 ARHGAP27Q6ZUM4 889 aa20.55■□□□□ 0.88
SCAPER-209ENST00000563919 NLGN1Q8N2Q7 840 aa20.55■□□□□ 0.88
SCAPER-209ENST00000563919 EYA1Q99502 592 aa20.55■□□□□ 0.88
SCAPER-209ENST00000563919 CARD14Q9BXL6 1004 aa20.55■□□□□ 0.88
SCAPER-209ENST00000563919 PPM1GO15355 546 aaPredicted RBP20.54■□□□□ 0.88
SCAPER-209ENST00000563919 PHKG2P15735 406 aa20.54■□□□□ 0.88
SCAPER-209ENST00000563919 IFNL2Q8IZJ0 200 aa20.54■□□□□ 0.88
SCAPER-209ENST00000563919 NMRK2Q9NPI5 230 aa20.54■□□□□ 0.88
SCAPER-209ENST00000563919 WASHC2AQ641Q2 1341 aa20.53■□□□□ 0.88
SCAPER-209ENST00000563919 C10orf71Q711Q0 1435 aa20.53■□□□□ 0.88
SCAPER-209ENST00000563919 RTCBQ9Y3I0 505 aaKnown RBP20.53■□□□□ 0.88
SCAPER-209ENST00000563919 DPEP1P16444 411 aa20.52■□□□□ 0.88
SCAPER-209ENST00000563919 CDCA8Q53HL2 280 aa20.51■□□□□ 0.87
SCAPER-209ENST00000563919 ARHGEF1Q92888 912 aaKnown RBP20.51■□□□□ 0.87
SCAPER-209ENST00000563919 SLC4A9Q96Q91 983 aa20.51■□□□□ 0.87
SCAPER-209ENST00000563919 CCDC87Q9NVE4 849 aa20.51■□□□□ 0.87
SCAPER-209ENST00000563919 KDRP35968 1356 aa20.5■□□□□ 0.87
SCAPER-209ENST00000563919 FCHSD2O94868 740 aa20.5■□□□□ 0.87
SCAPER-209ENST00000563919 ADRA2BP18089 450 aa20.5■□□□□ 0.87
SCAPER-209ENST00000563919 RC3H1Q5TC82 1133 aaKnown RBP20.5■□□□□ 0.87
SCAPER-209ENST00000563919 RBM46Q8TBY0 533 aaKnown RBP20.5■□□□□ 0.87
SCAPER-209ENST00000563919 GYS1P13807 737 aa20.49■□□□□ 0.87
SCAPER-209ENST00000563919 KCNA3P22001 575 aa20.49■□□□□ 0.87
SCAPER-209ENST00000563919 ANKRD26Q9UPS8 1709 aa20.49■□□□□ 0.87
SCAPER-209ENST00000563919 C9orf131Q5VYM1 1079 aa20.48■□□□□ 0.87
SCAPER-209ENST00000563919 BRCA1P38398 1863 aaKnown RBP20.47■□□□□ 0.87
SCAPER-209ENST00000563919 ERVV-2B6SEH9 535 aa20.47■□□□□ 0.87
SCAPER-209ENST00000563919 RFC4P35249 363 aa20.47■□□□□ 0.87
SCAPER-209ENST00000563919 PARP3Q9Y6F1 533 aa20.47■□□□□ 0.87
SCAPER-209ENST00000563919 C4AP0C0L4 1744 aa20.47■□□□□ 0.87
SCAPER-209ENST00000563919 ZNF831Q5JPB2 1677 aa20.46■□□□□ 0.87
SCAPER-209ENST00000563919 RPS6KA4O75676 772 aa20.46■□□□□ 0.87
SCAPER-209ENST00000563919 KLRG1Q96E93 195 aa20.46■□□□□ 0.87
SCAPER-209ENST00000563919 RBM42Q9BTD8 480 aaKnown RBP20.46■□□□□ 0.87
SCAPER-209ENST00000563919 POLKQ9UBT6 870 aa20.46■□□□□ 0.87
SCAPER-209ENST00000563919 WDR90Q96KV7 1748 aa20.46■□□□□ 0.87
SCAPER-209ENST00000563919 CNTNAP4Q9C0A0 1308 aa20.46■□□□□ 0.87
SCAPER-209ENST00000563919 CLSPNQ9HAW4 1339 aa20.46■□□□□ 0.87
SCAPER-209ENST00000563919 HTRA3P83110 453 aa20.45■□□□□ 0.86
SCAPER-209ENST00000563919 FSTL1Q12841 308 aa20.45■□□□□ 0.86
SCAPER-209ENST00000563919 C16orf71Q8IYS4 520 aaPredicted RBP20.45■□□□□ 0.86
SCAPER-209ENST00000563919 PLEKHG2Q9H7P9 1386 aa20.45■□□□□ 0.86
SCAPER-209ENST00000563919 JMYQ8N9B5 988 aa20.44■□□□□ 0.86
SCAPER-209ENST00000563919 PIM2Q9P1W9 311 aa20.44■□□□□ 0.86
SCAPER-209ENST00000563919 ARFGEF1Q9Y6D6 1849 aa20.43■□□□□ 0.86
SCAPER-209ENST00000563919 MYH14Q7Z406 1995 aaKnown RBP20.43■□□□□ 0.86
SCAPER-209ENST00000563919 EIF4A2Q14240 407 aaKnown RBP20.43■□□□□ 0.86
SCAPER-209ENST00000563919 COL13A1Q5TAT6 717 aaPredicted RBP20.43■□□□□ 0.86
SCAPER-209ENST00000563919 DCAF5Q96JK2 942 aa20.43■□□□□ 0.86
SCAPER-209ENST00000563919 COL5A3P25940 1745 aaPredicted RBP20.43■□□□□ 0.86
SCAPER-209ENST00000563919 HSP90AB1P08238 724 aaKnown RBP20.41■□□□□ 0.86
SCAPER-209ENST00000563919 DALRD3Q5D0E6 543 aaKnown RBP20.41■□□□□ 0.86
SCAPER-209ENST00000563919 KDM2BQ8NHM5 1336 aa20.41■□□□□ 0.86
SCAPER-209ENST00000563919 KCPQ6ZWJ8 1503 aa20.4■□□□□ 0.86
SCAPER-209ENST00000563919 RRAGCQ9HB90 399 aa20.39■□□□□ 0.85
SCAPER-209ENST00000563919 RNF181Q9P0P0 153 aa20.39■□□□□ 0.85
SCAPER-209ENST00000563919 CABP4P57796 275 aa20.38■□□□□ 0.85
SCAPER-209ENST00000563919 FKBP8Q14318 412 aa20.38■□□□□ 0.85
SCAPER-209ENST00000563919 SRP68Q9UHB9 627 aaKnown RBP20.38■□□□□ 0.85
SCAPER-209ENST00000563919 DDR1Q08345 913 aa20.37■□□□□ 0.85
SCAPER-209ENST00000563919 PLEKHO1Q53GL0 409 aaPredicted RBP20.37■□□□□ 0.85
SCAPER-209ENST00000563919 CCER1Q8TC90 406 aaPredicted RBP20.37■□□□□ 0.85
SCAPER-209ENST00000563919 TIMELESSQ9UNS1 1208 aa20.37■□□□□ 0.85
SCAPER-209ENST00000563919 KDM6AO15550 1401 aaPredicted RBP20.36■□□□□ 0.85
SCAPER-209ENST00000563919 PTCD1O75127 700 aaKnown RBP20.36■□□□□ 0.85
SCAPER-209ENST00000563919 CRKLP46109 303 aaKnown RBP20.36■□□□□ 0.85
SCAPER-209ENST00000563919 SBF1O95248 1867 aa20.35■□□□□ 0.85
SCAPER-209ENST00000563919 USP42Q9H9J4 1324 aaKnown RBP20.35■□□□□ 0.85
SCAPER-209ENST00000563919 CHRNA5P30532 468 aa20.35■□□□□ 0.85
SCAPER-209ENST00000563919 TNNT2P45379 298 aaPredicted RBP20.35■□□□□ 0.85
SCAPER-209ENST00000563919 ZNF530Q6P9A1 599 aaPredicted RBP20.35■□□□□ 0.85
SCAPER-209ENST00000563919 AMOTQ4VCS5 1084 aa20.34■□□□□ 0.85
SCAPER-209ENST00000563919 TM4SF1P30408 202 aa20.33■□□□□ 0.85
SCAPER-209ENST00000563919 MTHFSP49914 203 aa20.33■□□□□ 0.85
SCAPER-209ENST00000563919 SMC1BQ8NDV3 1235 aa20.33■□□□□ 0.85
SCAPER-209ENST00000563919 TNRC6CQ9HCJ0 1690 aaKnown RBP20.32■□□□□ 0.84
SCAPER-209ENST00000563919 POLRMTO00411 1230 aaKnown RBP20.32■□□□□ 0.84
SCAPER-209ENST00000563919 NFATC2IPQ8NCF5 419 aa20.32■□□□□ 0.84
SCAPER-209ENST00000563919 CAPN15O75808 1086 aa20.31■□□□□ 0.84
SCAPER-209ENST00000563919 INTS5Q6P9B9 1019 aaKnown RBP20.31■□□□□ 0.84
SCAPER-209ENST00000563919 TNS4Q8IZW8 715 aa20.31■□□□□ 0.84
SCAPER-209ENST00000563919 ZC3H4Q9UPT8 1303 aaKnown RBP20.29■□□□□ 0.84
SCAPER-209ENST00000563919 PRELPP51888 382 aa20.29■□□□□ 0.84
SCAPER-209ENST00000563919 RASSF7Q02833 373 aa20.28■□□□□ 0.84
SCAPER-209ENST00000563919 C1orf141Q5JVX7 400 aa20.28■□□□□ 0.84
SCAPER-209ENST00000563919 ADAMTS7Q9UKP4 1686 aa20.28■□□□□ 0.84
SCAPER-209ENST00000563919 TJP1Q07157 1748 aa20.27■□□□□ 0.84
SCAPER-209ENST00000563919 ZPR1O75312 459 aa20.27■□□□□ 0.84
SCAPER-209ENST00000563919 AEBP1Q8IUX7 1158 aa20.27■□□□□ 0.84
SCAPER-209ENST00000563919 GLTPD2A6NH11 291 aa20.26■□□□□ 0.83
SCAPER-209ENST00000563919 VEGFAP15692 232 aaPredicted RBP20.26■□□□□ 0.83
SCAPER-209ENST00000563919 LMNB1P20700 586 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms