RNA–Protein interactions for RNA: ENST00000563783.5

SPG7-208, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-208ENST00000563783 MSH5O43196 834 aa34.15■■■■□ 3.06
SPG7-208ENST00000563783 SSFA2P28290 1259 aa34.15■■■■□ 3.06
SPG7-208ENST00000563783 C1orf141Q5JVX7 400 aa34.15■■■■□ 3.06
SPG7-208ENST00000563783 COL5A3P25940 1745 aaPredicted RBP34.13■■■■□ 3.05
SPG7-208ENST00000563783 CICQ96RK0 1608 aaPredicted RBP34.12■■■■□ 3.05
SPG7-208ENST00000563783 LINC00116Q8NCU8 138 aa34.12■■■■□ 3.05
SPG7-208ENST00000563783 ATP6V1AP38606 617 aa34.11■■■■□ 3.05
SPG7-208ENST00000563783 VIRMAQ69YN4 1812 aaKnown RBP34.09■■■■□ 3.05
SPG7-208ENST00000563783 ITPK1Q13572 414 aa34.09■■■■□ 3.05
SPG7-208ENST00000563783 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP34.08■■■■□ 3.05
SPG7-208ENST00000563783 CABP4P57796 275 aa34.08■■■■□ 3.05
SPG7-208ENST00000563783 CC2D1BQ5T0F9 858 aaKnown RBP34.08■■■■□ 3.05
SPG7-208ENST00000563783 DIAPH1O60610 1272 aaKnown RBP34.06■■■■□ 3.04
SPG7-208ENST00000563783 COL3A1P02461 1466 aaPredicted RBP34.06■■■■□ 3.04
SPG7-208ENST00000563783 ADAMTS7Q9UKP4 1686 aa34.06■■■■□ 3.04
SPG7-208ENST00000563783 AKAP4Q5JQC9 854 aa34.05■■■■□ 3.04
SPG7-208ENST00000563783 RC3H1Q5TC82 1133 aaKnown RBP34.05■■■■□ 3.04
SPG7-208ENST00000563783 AMIGO3Q86WK7 504 aa34.04■■■■□ 3.04
SPG7-208ENST00000563783 CD2APQ9Y5K6 639 aa34.04■■■■□ 3.04
SPG7-208ENST00000563783 MRC1P22897 1456 aa34.03■■■■□ 3.04
SPG7-208ENST00000563783 GNPATO15228 680 aa34.02■■■■□ 3.04
SPG7-208ENST00000563783 MSL1Q68DK7 614 aa34.02■■■■□ 3.04
SPG7-208ENST00000563783 CNTNAP4Q9C0A0 1308 aa34.02■■■■□ 3.04
SPG7-208ENST00000563783 ADRA2BP18089 450 aa34.01■■■■□ 3.03
SPG7-208ENST00000563783 KLHL34Q8N239 644 aa34.01■■■■□ 3.03
SPG7-208ENST00000563783 SLC4A9Q96Q91 983 aa34.01■■■■□ 3.03
SPG7-208ENST00000563783 UTRNP46939 3433 aa34.01■■■■□ 3.03
SPG7-208ENST00000563783 MYH14Q7Z406 1995 aaKnown RBP34■■■■□ 3.03
SPG7-208ENST00000563783 PHF14O94880 888 aa33.99■■■■□ 3.03
SPG7-208ENST00000563783 GPR162Q16538 588 aa33.98■■■■□ 3.03
SPG7-208ENST00000563783 NFATC2IPQ8NCF5 419 aa33.98■■■■□ 3.03
SPG7-208ENST00000563783 RBM42Q9BTD8 480 aaKnown RBP33.98■■■■□ 3.03
SPG7-208ENST00000563783 NLGN2Q8NFZ4 835 aa33.97■■■■□ 3.03
SPG7-208ENST00000563783 RTCBQ9Y3I0 505 aaKnown RBP33.97■■■■□ 3.03
SPG7-208ENST00000563783 TJP1Q07157 1748 aa33.96■■■■□ 3.03
SPG7-208ENST00000563783 HMOX1P09601 288 aa33.95■■■■□ 3.03
SPG7-208ENST00000563783 SLC52A2Q9HAB3 445 aa33.94■■■■□ 3.02
SPG7-208ENST00000563783 RPS6KA4O75676 772 aa33.92■■■■□ 3.02
SPG7-208ENST00000563783 TRAPPC3LQ5T215 181 aa33.92■■■■□ 3.02
SPG7-208ENST00000563783 C4AP0C0L4 1744 aa33.92■■■■□ 3.02
SPG7-208ENST00000563783 KIF13BQ9NQT8 1826 aa33.91■■■■□ 3.02
SPG7-208ENST00000563783 GRIN3BO60391 1043 aa33.91■■■■□ 3.02
SPG7-208ENST00000563783 RNMTO43148 476 aaKnown RBP33.9■■■■□ 3.02
SPG7-208ENST00000563783 GOLGB1Q14789 3259 aaKnown RBP33.9■■■■□ 3.02
SPG7-208ENST00000563783 MTHFSDQ2M296 383 aaKnown RBP33.89■■■■□ 3.02
SPG7-208ENST00000563783 NLGN1Q8N2Q7 840 aa33.88■■■■□ 3.01
SPG7-208ENST00000563783 UBR2Q8IWV8 1755 aa33.88■■■■□ 3.01
SPG7-208ENST00000563783 PTCD1O75127 700 aaKnown RBP33.87■■■■□ 3.01
SPG7-208ENST00000563783 SMIM5Q71RC9 77 aa33.87■■■■□ 3.01
SPG7-208ENST00000563783 CFAP53Q96M91 514 aa33.87■■■■□ 3.01
SPG7-208ENST00000563783 LGR6Q9HBX8 967 aa33.86■■■■□ 3.01
SPG7-208ENST00000563783 CRKLP46109 303 aaKnown RBP33.84■■■■□ 3.01
SPG7-208ENST00000563783 ZNF784Q8NCA9 323 aaPredicted RBP33.84■■■■□ 3.01
SPG7-208ENST00000563783 GAS2L2Q8NHY3 880 aa33.84■■■■□ 3.01
SPG7-208ENST00000563783 ARHGEF1Q92888 912 aaKnown RBP33.84■■■■□ 3.01
SPG7-208ENST00000563783 KCPQ6ZWJ8 1503 aa33.83■■■■□ 3.01
SPG7-208ENST00000563783 SIPA1L3O60292 1781 aaPredicted RBP33.83■■■■□ 3.01
SPG7-208ENST00000563783 U2SURPO15042 1029 aaKnown RBP33.82■■■■□ 3
SPG7-208ENST00000563783 RFC4P35249 363 aa33.82■■■■□ 3
SPG7-208ENST00000563783 PELP1Q8IZL8 1130 aaKnown RBP33.82■■■■□ 3
SPG7-208ENST00000563783 MMP10P09238 476 aa33.81■■■■□ 3
SPG7-208ENST00000563783 YBX3P16989 372 aaKnown RBP eCLIP33.81■■■■□ 3
SPG7-208ENST00000563783 VSIG10Q8N0Z9 540 aa33.8■■■■□ 3
SPG7-208ENST00000563783 NUDCQ9Y266 331 aa33.79■■■■□ 3
SPG7-208ENST00000563783 GYS1P13807 737 aa33.78■■■■□ 3
SPG7-208ENST00000563783 GNAT3A8MTJ3 354 aa33.77■■■■□ 3
SPG7-208ENST00000563783 KIAA1551Q9HCM1 1747 aa33.76■■■■□ 3
SPG7-208ENST00000563783 PPP2R1AP30153 589 aa33.76■■■□□ 2.99
SPG7-208ENST00000563783 C10orf71Q711Q0 1435 aa33.76■■■□□ 2.99
SPG7-208ENST00000563783 INTS5Q6P9B9 1019 aaKnown RBP33.75■■■□□ 2.99
SPG7-208ENST00000563783 RSPH6AQ9H0K4 717 aa33.74■■■□□ 2.99
SPG7-208ENST00000563783 CCDC87Q9NVE4 849 aa33.74■■■□□ 2.99
SPG7-208ENST00000563783 USP42Q9H9J4 1324 aaKnown RBP33.74■■■□□ 2.99
SPG7-208ENST00000563783 CNGB1Q14028 1251 aaPredicted RBP33.73■■■□□ 2.99
SPG7-208ENST00000563783 CEMIPQ8WUJ3 1361 aa33.72■■■□□ 2.99
SPG7-208ENST00000563783 DNAJC10Q8IXB1 793 aa33.72■■■□□ 2.99
SPG7-208ENST00000563783 CYP19A1P11511 503 aaPredicted RBP33.71■■■□□ 2.99
SPG7-208ENST00000563783 TGFB2P61812 414 aa33.71■■■□□ 2.99
SPG7-208ENST00000563783 SLC39A6Q13433 755 aa33.71■■■□□ 2.99
SPG7-208ENST00000563783 TEFQ10587 303 aa33.7■■■□□ 2.99
SPG7-208ENST00000563783 SOS1Q07889 1333 aaPredicted RBP33.7■■■□□ 2.99
SPG7-208ENST00000563783 PXDNLA1KZ92 1463 aa33.69■■■□□ 2.98
SPG7-208ENST00000563783 FCHSD2O94868 740 aa33.69■■■□□ 2.98
SPG7-208ENST00000563783 IL17REQ8NFR9 667 aa33.69■■■□□ 2.98
SPG7-208ENST00000563783 PARP3Q9Y6F1 533 aa33.69■■■□□ 2.98
SPG7-208ENST00000563783 BRCA1P38398 1863 aaKnown RBP33.69■■■□□ 2.98
SPG7-208ENST00000563783 PRKAR2BP31323 418 aa33.68■■■□□ 2.98
SPG7-208ENST00000563783 TTC5Q8N0Z6 440 aa33.68■■■□□ 2.98
SPG7-208ENST00000563783 N4BP2Q86UW6 1770 aaPredicted RBP33.66■■■□□ 2.98
SPG7-208ENST00000563783 PHACTR3Q96KR7 559 aa33.65■■■□□ 2.98
SPG7-208ENST00000563783 TEX13AQ9BXU3 409 aaPredicted RBP33.65■■■□□ 2.98
SPG7-208ENST00000563783 ZNF790Q6PG37 636 aa33.64■■■□□ 2.98
SPG7-208ENST00000563783 COL15A1P39059 1388 aa33.63■■■□□ 2.97
SPG7-208ENST00000563783 STARD3NLO95772 234 aa33.63■■■□□ 2.97
SPG7-208ENST00000563783 U2AF1L5P0DN76 240 aaPredicted RBP33.63■■■□□ 2.97
SPG7-208ENST00000563783 U2AF1Q01081 240 aaKnown RBP eCLIP33.63■■■□□ 2.97
SPG7-208ENST00000563783 HEG1Q9ULI3 1381 aa33.62■■■□□ 2.97
SPG7-208ENST00000563783 ZPR1O75312 459 aa33.62■■■□□ 2.97
SPG7-208ENST00000563783 FKBP8Q14318 412 aa33.61■■■□□ 2.97
SPG7-208ENST00000563783 SRP68Q9UHB9 627 aaKnown RBP33.61■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms