RNA–Protein interactions for RNA: ENST00000563720.1

MAP1LC3B-204, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 3

Gene MAP1LC3B, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-204ENST00000563720 IFNL2Q8IZJ0 200 aa23.71■■□□□ 1.39
MAP1LC3B-204ENST00000563720 IL13P35225 146 aa23.69■■□□□ 1.38
MAP1LC3B-204ENST00000563720 AEBP1Q8IUX7 1158 aa23.69■■□□□ 1.38
MAP1LC3B-204ENST00000563720 PIGBQ92521 554 aa23.69■■□□□ 1.38
MAP1LC3B-204ENST00000563720 C4BP0C0L5 1744 aa23.68■■□□□ 1.38
MAP1LC3B-204ENST00000563720 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.68■■□□□ 1.38
MAP1LC3B-204ENST00000563720 CC2D1BQ5T0F9 858 aaKnown RBP23.68■■□□□ 1.38
MAP1LC3B-204ENST00000563720 AMIGO3Q86WK7 504 aa23.68■■□□□ 1.38
MAP1LC3B-204ENST00000563720 VIRMAQ69YN4 1812 aaKnown RBP23.68■■□□□ 1.38
MAP1LC3B-204ENST00000563720 KDRP35968 1356 aa23.67■■□□□ 1.38
MAP1LC3B-204ENST00000563720 NPC1L1Q9UHC9 1359 aa23.67■■□□□ 1.38
MAP1LC3B-204ENST00000563720 SMIM5Q71RC9 77 aa23.67■■□□□ 1.38
MAP1LC3B-204ENST00000563720 MTHFSP49914 203 aa23.66■■□□□ 1.38
MAP1LC3B-204ENST00000563720 UBR3Q6ZT12 1888 aa23.65■■□□□ 1.38
MAP1LC3B-204ENST00000563720 PLEKHO1Q53GL0 409 aaPredicted RBP23.65■■□□□ 1.38
MAP1LC3B-204ENST00000563720 SSFA2P28290 1259 aa23.64■■□□□ 1.37
MAP1LC3B-204ENST00000563720 SULT6B1Q6IMI4 303 aa23.64■■□□□ 1.37
MAP1LC3B-204ENST00000563720 TMOD3Q9NYL9 352 aa23.64■■□□□ 1.37
MAP1LC3B-204ENST00000563720 SCN11AQ9UI33 1791 aa23.64■■□□□ 1.37
MAP1LC3B-204ENST00000563720 KDM6AO15550 1401 aaPredicted RBP23.62■■□□□ 1.37
MAP1LC3B-204ENST00000563720 LOC102724428A0A0B4J2F2 783 aa23.62■■□□□ 1.37
MAP1LC3B-204ENST00000563720 SIK1P57059 783 aa23.62■■□□□ 1.37
MAP1LC3B-204ENST00000563720 AMOTQ4VCS5 1084 aa23.62■■□□□ 1.37
MAP1LC3B-204ENST00000563720 ZNF530Q6P9A1 599 aaPredicted RBP23.61■■□□□ 1.37
MAP1LC3B-204ENST00000563720 LINC00116Q8NCU8 138 aa23.61■■□□□ 1.37
MAP1LC3B-204ENST00000563720 ZNF831Q5JPB2 1677 aa23.6■■□□□ 1.37
MAP1LC3B-204ENST00000563720 HSP90AB1P08238 724 aaKnown RBP23.6■■□□□ 1.37
MAP1LC3B-204ENST00000563720 DCAF5Q96JK2 942 aa23.6■■□□□ 1.37
MAP1LC3B-204ENST00000563720 ASAP1Q9ULH1 1129 aa23.6■■□□□ 1.37
MAP1LC3B-204ENST00000563720 COL3A1P02461 1466 aaPredicted RBP23.6■■□□□ 1.37
MAP1LC3B-204ENST00000563720 KIF3CO14782 793 aa23.59■■□□□ 1.37
MAP1LC3B-204ENST00000563720 GNPATO15228 680 aa23.59■■□□□ 1.37
MAP1LC3B-204ENST00000563720 ERVV-2B6SEH9 535 aa23.58■■□□□ 1.37
MAP1LC3B-204ENST00000563720 ATG3Q9NT62 314 aa23.58■■□□□ 1.37
MAP1LC3B-204ENST00000563720 ATP6V1AP38606 617 aa23.57■■□□□ 1.36
MAP1LC3B-204ENST00000563720 CNGB1Q14028 1251 aaPredicted RBP23.57■■□□□ 1.36
MAP1LC3B-204ENST00000563720 COL5A3P25940 1745 aaPredicted RBP23.56■■□□□ 1.36
MAP1LC3B-204ENST00000563720 DIAPH1O60610 1272 aaKnown RBP23.55■■□□□ 1.36
MAP1LC3B-204ENST00000563720 MMP10P09238 476 aa23.55■■□□□ 1.36
MAP1LC3B-204ENST00000563720 ITPK1Q13572 414 aa23.55■■□□□ 1.36
MAP1LC3B-204ENST00000563720 HMOX1P09601 288 aa23.54■■□□□ 1.36
MAP1LC3B-204ENST00000563720 C1orf141Q5JVX7 400 aa23.54■■□□□ 1.36
MAP1LC3B-204ENST00000563720 ADAMTS7Q9UKP4 1686 aa23.52■■□□□ 1.36
MAP1LC3B-204ENST00000563720 APLP1P51693 650 aa23.52■■□□□ 1.36
MAP1LC3B-204ENST00000563720 BCS1LQ9Y276 419 aa23.52■■□□□ 1.36
MAP1LC3B-204ENST00000563720 CABP4P57796 275 aa23.51■■□□□ 1.35
MAP1LC3B-204ENST00000563720 MYH14Q7Z406 1995 aaKnown RBP23.51■■□□□ 1.35
MAP1LC3B-204ENST00000563720 PXDNLA1KZ92 1463 aa23.5■■□□□ 1.35
MAP1LC3B-204ENST00000563720 TGFB2P61812 414 aa23.5■■□□□ 1.35
MAP1LC3B-204ENST00000563720 SLC4A9Q96Q91 983 aa23.5■■□□□ 1.35
MAP1LC3B-204ENST00000563720 RTCBQ9Y3I0 505 aaKnown RBP23.5■■□□□ 1.35
MAP1LC3B-204ENST00000563720 CICQ96RK0 1608 aaPredicted RBP23.5■■□□□ 1.35
MAP1LC3B-204ENST00000563720 A0A0G2JLW4 131 aa23.49■■□□□ 1.35
MAP1LC3B-204ENST00000563720 TOMM70O94826 608 aa23.49■■□□□ 1.35
MAP1LC3B-204ENST00000563720 AKAP4Q5JQC9 854 aa23.49■■□□□ 1.35
MAP1LC3B-204ENST00000563720 TRAPPC3LQ5T215 181 aa23.49■■□□□ 1.35
MAP1LC3B-204ENST00000563720 TJP1Q07157 1748 aa23.48■■□□□ 1.35
MAP1LC3B-204ENST00000563720 ARHGAP27Q6ZUM4 889 aa23.48■■□□□ 1.35
MAP1LC3B-204ENST00000563720 NLGN1Q8N2Q7 840 aa23.48■■□□□ 1.35
MAP1LC3B-204ENST00000563720 NFATC2IPQ8NCF5 419 aa23.47■■□□□ 1.35
MAP1LC3B-204ENST00000563720 MRC1P22897 1456 aa23.47■■□□□ 1.35
MAP1LC3B-204ENST00000563720 MTHFSDQ2M296 383 aaKnown RBP23.46■■□□□ 1.35
MAP1LC3B-204ENST00000563720 RBM42Q9BTD8 480 aaKnown RBP23.46■■□□□ 1.35
MAP1LC3B-204ENST00000563720 CCDC87Q9NVE4 849 aa23.46■■□□□ 1.35
MAP1LC3B-204ENST00000563720 U2SURPO15042 1029 aaKnown RBP23.44■■□□□ 1.34
MAP1LC3B-204ENST00000563720 FCHSD2O94868 740 aa23.44■■□□□ 1.34
MAP1LC3B-204ENST00000563720 LGR6Q9HBX8 967 aa23.44■■□□□ 1.34
MAP1LC3B-204ENST00000563720 C10orf71Q711Q0 1435 aa23.43■■□□□ 1.34
MAP1LC3B-204ENST00000563720 N4BP2Q86UW6 1770 aaPredicted RBP23.43■■□□□ 1.34
MAP1LC3B-204ENST00000563720 C4AP0C0L4 1744 aa23.43■■□□□ 1.34
MAP1LC3B-204ENST00000563720 DPEP1P16444 411 aa23.43■■□□□ 1.34
MAP1LC3B-204ENST00000563720 PPP2R1AP30153 589 aa23.43■■□□□ 1.34
MAP1LC3B-204ENST00000563720 ARHGEF1Q92888 912 aaKnown RBP23.43■■□□□ 1.34
MAP1LC3B-204ENST00000563720 NMRK2Q9NPI5 230 aa23.43■■□□□ 1.34
MAP1LC3B-204ENST00000563720 KIF13BQ9NQT8 1826 aa23.43■■□□□ 1.34
MAP1LC3B-204ENST00000563720 SIPA1L3O60292 1781 aaPredicted RBP23.42■■□□□ 1.34
MAP1LC3B-204ENST00000563720 ADRA2BP18089 450 aa23.42■■□□□ 1.34
MAP1LC3B-204ENST00000563720 RFC4P35249 363 aa23.42■■□□□ 1.34
MAP1LC3B-204ENST00000563720 PARP3Q9Y6F1 533 aa23.42■■□□□ 1.34
MAP1LC3B-204ENST00000563720 RNMTO43148 476 aaKnown RBP23.41■■□□□ 1.34
MAP1LC3B-204ENST00000563720 RC3H1Q5TC82 1133 aaKnown RBP23.41■■□□□ 1.34
MAP1LC3B-204ENST00000563720 DNAJC5GQ8N7S2 189 aa23.41■■□□□ 1.34
MAP1LC3B-204ENST00000563720 SLC52A2Q9HAB3 445 aa23.41■■□□□ 1.34
MAP1LC3B-204ENST00000563720 UBR2Q8IWV8 1755 aa23.41■■□□□ 1.34
MAP1LC3B-204ENST00000563720 CNTNAP4Q9C0A0 1308 aa23.4■■□□□ 1.34
MAP1LC3B-204ENST00000563720 KIAA1551Q9HCM1 1747 aa23.4■■□□□ 1.34
MAP1LC3B-204ENST00000563720 PTCD1O75127 700 aaKnown RBP23.4■■□□□ 1.34
MAP1LC3B-204ENST00000563720 GYS1P13807 737 aa23.4■■□□□ 1.34
MAP1LC3B-204ENST00000563720 C16orf71Q8IYS4 520 aaPredicted RBP23.4■■□□□ 1.34
MAP1LC3B-204ENST00000563720 CFAP53Q96M91 514 aa23.4■■□□□ 1.34
MAP1LC3B-204ENST00000563720 RPS6KA4O75676 772 aa23.39■■□□□ 1.33
MAP1LC3B-204ENST00000563720 C9orf131Q5VYM1 1079 aa23.38■■□□□ 1.33
MAP1LC3B-204ENST00000563720 RBM46Q8TBY0 533 aaKnown RBP23.37■■□□□ 1.33
MAP1LC3B-204ENST00000563720 KCPQ6ZWJ8 1503 aa23.37■■□□□ 1.33
MAP1LC3B-204ENST00000563720 GAS2L2Q8NHY3 880 aa23.35■■□□□ 1.33
MAP1LC3B-204ENST00000563720 RSPH6AQ9H0K4 717 aa23.35■■□□□ 1.33
MAP1LC3B-204ENST00000563720 PIM2Q9P1W9 311 aa23.35■■□□□ 1.33
MAP1LC3B-204ENST00000563720 SLC39A6Q13433 755 aa23.34■■□□□ 1.33
MAP1LC3B-204ENST00000563720 KCNA3P22001 575 aa23.33■■□□□ 1.33
MAP1LC3B-204ENST00000563720 PRKAR2BP31323 418 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms