RNA–Protein interactions for RNA: ENST00000563560.1

RPUSD1-204, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 2

Gene RPUSD1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-204ENST00000563560 DLG5Q8TDM6 1919 aa19.94■□□□□ 0.78
RPUSD1-204ENST00000563560 ITPK1Q13572 414 aa19.94■□□□□ 0.78
RPUSD1-204ENST00000563560 KCPQ6ZWJ8 1503 aa19.93■□□□□ 0.78
RPUSD1-204ENST00000563560 LOC102724428A0A0B4J2F2 783 aa19.93■□□□□ 0.78
RPUSD1-204ENST00000563560 ZBTB7AO95365 584 aa19.93■□□□□ 0.78
RPUSD1-204ENST00000563560 SIK1P57059 783 aa19.93■□□□□ 0.78
RPUSD1-204ENST00000563560 DDX10Q13206 875 aaKnown RBP19.93■□□□□ 0.78
RPUSD1-204ENST00000563560 LGR6Q9HBX8 967 aa19.93■□□□□ 0.78
RPUSD1-204ENST00000563560 UTRNP46939 3433 aa19.92■□□□□ 0.78
RPUSD1-204ENST00000563560 C1orf141Q5JVX7 400 aa19.92■□□□□ 0.78
RPUSD1-204ENST00000563560 LINC00116Q8NCU8 138 aa19.92■□□□□ 0.78
RPUSD1-204ENST00000563560 PHACTR3Q96KR7 559 aa19.92■□□□□ 0.78
RPUSD1-204ENST00000563560 MTFR1LQ9H019 292 aa19.92■□□□□ 0.78
RPUSD1-204ENST00000563560 U2SURPO15042 1029 aaKnown RBP19.91■□□□□ 0.78
RPUSD1-204ENST00000563560 RNMTO43148 476 aaKnown RBP19.91■□□□□ 0.78
RPUSD1-204ENST00000563560 ZEB1P37275 1124 aaPredicted RBP19.9■□□□□ 0.78
RPUSD1-204ENST00000563560 COL23A1Q86Y22 540 aaPredicted RBP19.9■□□□□ 0.78
RPUSD1-204ENST00000563560 NFATC2IPQ8NCF5 419 aa19.9■□□□□ 0.78
RPUSD1-204ENST00000563560 CFAP53Q96M91 514 aa19.9■□□□□ 0.78
RPUSD1-204ENST00000563560 C4AP0C0L4 1744 aa19.9■□□□□ 0.78
RPUSD1-204ENST00000563560 CEMIPQ8WUJ3 1361 aa19.89■□□□□ 0.77
RPUSD1-204ENST00000563560 SLC52A2Q9HAB3 445 aa19.89■□□□□ 0.77
RPUSD1-204ENST00000563560 MAP3K5Q99683 1374 aa19.88■□□□□ 0.77
RPUSD1-204ENST00000563560 PRKAR2BP31323 418 aa19.88■□□□□ 0.77
RPUSD1-204ENST00000563560 CABP4P57796 275 aa19.88■□□□□ 0.77
RPUSD1-204ENST00000563560 SLC16A10Q8TF71 515 aa19.88■□□□□ 0.77
RPUSD1-204ENST00000563560 TFCP2L1Q9NZI6 479 aa19.88■□□□□ 0.77
RPUSD1-204ENST00000563560 ATF5Q9Y2D1 282 aaPredicted RBP19.88■□□□□ 0.77
RPUSD1-204ENST00000563560 GOLGB1Q14789 3259 aaKnown RBP19.88■□□□□ 0.77
RPUSD1-204ENST00000563560 IL17REQ8NFR9 667 aa19.87■□□□□ 0.77
RPUSD1-204ENST00000563560 FCHSD2O94868 740 aa19.86■□□□□ 0.77
RPUSD1-204ENST00000563560 RALBP1Q15311 655 aa19.86■□□□□ 0.77
RPUSD1-204ENST00000563560 ATP6V1AP38606 617 aa19.85■□□□□ 0.77
RPUSD1-204ENST00000563560 SMIM5Q71RC9 77 aa19.84■□□□□ 0.77
RPUSD1-204ENST00000563560 GAS2L2Q8NHY3 880 aa19.84■□□□□ 0.77
RPUSD1-204ENST00000563560 PLEKHF1Q96S99 279 aa19.84■□□□□ 0.77
RPUSD1-204ENST00000563560 NUDCQ9Y266 331 aa19.84■□□□□ 0.77
RPUSD1-204ENST00000563560 U2AF1L5P0DN76 240 aaPredicted RBP19.83■□□□□ 0.77
RPUSD1-204ENST00000563560 U2AF1Q01081 240 aaKnown RBP eCLIP19.83■□□□□ 0.77
RPUSD1-204ENST00000563560 CNTNAP4Q9C0A0 1308 aa19.82■□□□□ 0.76
RPUSD1-204ENST00000563560 GNAT3A8MTJ3 354 aa19.82■□□□□ 0.76
RPUSD1-204ENST00000563560 HMGB2P26583 209 aaKnown RBP19.82■□□□□ 0.76
RPUSD1-204ENST00000563560 RC3H1Q5TC82 1133 aaKnown RBP19.81■□□□□ 0.76
RPUSD1-204ENST00000563560 KDM3BQ7LBC6 1761 aa19.8■□□□□ 0.76
RPUSD1-204ENST00000563560 MYBBP1AQ9BQG0 1328 aaKnown RBP19.8■□□□□ 0.76
RPUSD1-204ENST00000563560 SSFA2P28290 1259 aa19.8■□□□□ 0.76
RPUSD1-204ENST00000563560 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.79■□□□□ 0.76
RPUSD1-204ENST00000563560 SLC39A6Q13433 755 aa19.79■□□□□ 0.76
RPUSD1-204ENST00000563560 FLAD1Q8NFF5 587 aa19.79■□□□□ 0.76
RPUSD1-204ENST00000563560 AK7Q96M32 723 aa19.79■□□□□ 0.76
RPUSD1-204ENST00000563560 RBM42Q9BTD8 480 aaKnown RBP19.79■□□□□ 0.76
RPUSD1-204ENST00000563560 PRKRIP1Q9H875 184 aaPredicted RBP19.79■□□□□ 0.76
RPUSD1-204ENST00000563560 PTCD1O75127 700 aaKnown RBP19.78■□□□□ 0.76
RPUSD1-204ENST00000563560 KIF13BQ9NQT8 1826 aa19.78■□□□□ 0.76
RPUSD1-204ENST00000563560 ARXQ96QS3 562 aa19.77■□□□□ 0.76
RPUSD1-204ENST00000563560 FHDC1Q9C0D6 1143 aaPredicted RBP19.77■□□□□ 0.76
RPUSD1-204ENST00000563560 KIAA1551Q9HCM1 1747 aa19.76■□□□□ 0.75
RPUSD1-204ENST00000563560 GNPATO15228 680 aa19.76■□□□□ 0.75
RPUSD1-204ENST00000563560 INTS5Q6P9B9 1019 aaKnown RBP19.76■□□□□ 0.75
RPUSD1-204ENST00000563560 SYT17Q9BSW7 474 aa19.76■□□□□ 0.75
RPUSD1-204ENST00000563560 VSIG10Q8N0Z9 540 aa19.75■□□□□ 0.75
RPUSD1-204ENST00000563560 PPP1R1BQ9UD71 204 aaPredicted RBP19.75■□□□□ 0.75
RPUSD1-204ENST00000563560 HTATSF1O43719 755 aaKnown RBP19.74■□□□□ 0.75
RPUSD1-204ENST00000563560 RPS6KA4O75676 772 aa19.74■□□□□ 0.75
RPUSD1-204ENST00000563560 CRKLP46109 303 aaKnown RBP19.74■□□□□ 0.75
RPUSD1-204ENST00000563560 DNAJC10Q8IXB1 793 aa19.74■□□□□ 0.75
RPUSD1-204ENST00000563560 PHF14O94880 888 aa19.73■□□□□ 0.75
RPUSD1-204ENST00000563560 CYP19A1P11511 503 aaPredicted RBP19.73■□□□□ 0.75
RPUSD1-204ENST00000563560 MSL1Q68DK7 614 aa19.73■□□□□ 0.75
RPUSD1-204ENST00000563560 ZNF790Q6PG37 636 aa19.73■□□□□ 0.75
RPUSD1-204ENST00000563560 ADRA2BP18089 450 aa19.72■□□□□ 0.75
RPUSD1-204ENST00000563560 MCM10Q7L590 875 aa19.72■□□□□ 0.75
RPUSD1-204ENST00000563560 ZNF496Q96IT1 587 aaPredicted RBP19.72■□□□□ 0.75
RPUSD1-204ENST00000563560 HEG1Q9ULI3 1381 aa19.71■□□□□ 0.75
RPUSD1-204ENST00000563560 LAMB4A4D0S4 1761 aa19.71■□□□□ 0.75
RPUSD1-204ENST00000563560 KCNQ3O43525 872 aa19.71■□□□□ 0.75
RPUSD1-204ENST00000563560 DCTN1Q14203 1278 aa19.71■□□□□ 0.75
RPUSD1-204ENST00000563560 ARHGEF1Q92888 912 aaKnown RBP19.71■□□□□ 0.75
RPUSD1-204ENST00000563560 TEFQ10587 303 aa19.7■□□□□ 0.74
RPUSD1-204ENST00000563560 RTCBQ9Y3I0 505 aaKnown RBP19.7■□□□□ 0.74
RPUSD1-204ENST00000563560 SOS1Q07889 1333 aaPredicted RBP19.7■□□□□ 0.74
RPUSD1-204ENST00000563560 ZNF316A6NFI3 1004 aaPredicted RBP19.69■□□□□ 0.74
RPUSD1-204ENST00000563560 MSH5O43196 834 aa19.69■□□□□ 0.74
RPUSD1-204ENST00000563560 POLD1P28340 1107 aa19.69■□□□□ 0.74
RPUSD1-204ENST00000563560 NFE2L2Q16236 605 aa19.69■□□□□ 0.74
RPUSD1-204ENST00000563560 SCN7AQ01118 1682 aa19.68■□□□□ 0.74
RPUSD1-204ENST00000563560 NRXN2Q9P2S2 1712 aa19.68■□□□□ 0.74
RPUSD1-204ENST00000563560 GYS1P13807 737 aa19.68■□□□□ 0.74
RPUSD1-204ENST00000563560 BRCA1P38398 1863 aaKnown RBP19.67■□□□□ 0.74
RPUSD1-204ENST00000563560 TRAPPC3LQ5T215 181 aa19.67■□□□□ 0.74
RPUSD1-204ENST00000563560 CCDC87Q9NVE4 849 aa19.67■□□□□ 0.74
RPUSD1-204ENST00000563560 BCORQ6W2J9 1755 aa19.67■□□□□ 0.74
RPUSD1-204ENST00000563560 AFDNP55196 1824 aaKnown RBP19.67■□□□□ 0.74
RPUSD1-204ENST00000563560 NLGN2Q8NFZ4 835 aa19.66■□□□□ 0.74
RPUSD1-204ENST00000563560 ZBTB1Q9Y2K1 713 aa19.66■□□□□ 0.74
RPUSD1-204ENST00000563560 USP42Q9H9J4 1324 aaKnown RBP19.66■□□□□ 0.74
RPUSD1-204ENST00000563560 BTBD11A6QL63 1104 aa19.65■□□□□ 0.74
RPUSD1-204ENST00000563560 TTC5Q8N0Z6 440 aa19.64■□□□□ 0.73
RPUSD1-204ENST00000563560 CHD4Q14839 1912 aa19.64■□□□□ 0.73
RPUSD1-204ENST00000563560 COL15A1P39059 1388 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms