RNA–Protein interactions for RNA: ENST00000563255.1

CDH11-207, Transcript of cadherin 11, humanhuman

TSL 5

Gene CDH11, Length 545 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-207ENST00000563255 SBF2Q86WG5 1849 aa19.29■□□□□ 0.68
CDH11-207ENST00000563255 IL16Q14005 1332 aa19.28■□□□□ 0.68
CDH11-207ENST00000563255 TNS2Q63HR2 1409 aa19.28■□□□□ 0.68
CDH11-207ENST00000563255 DCAF8L1A6NGE4 600 aa19.28■□□□□ 0.68
CDH11-207ENST00000563255 PHKG2P15735 406 aa19.28■□□□□ 0.68
CDH11-207ENST00000563255 ITGB4P16144 1822 aa19.28■□□□□ 0.68
CDH11-207ENST00000563255 CYP27B1O15528 508 aa19.27■□□□□ 0.68
CDH11-207ENST00000563255 HSP90AB1P08238 724 aaKnown RBP19.27■□□□□ 0.68
CDH11-207ENST00000563255 NKX1-1Q15270 411 aaPredicted RBP19.26■□□□□ 0.67
CDH11-207ENST00000563255 TXNRD1Q16881 649 aa19.26■□□□□ 0.67
CDH11-207ENST00000563255 CEMIPQ8WUJ3 1361 aa19.26■□□□□ 0.67
CDH11-207ENST00000563255 BCL9O00512 1426 aa19.25■□□□□ 0.67
CDH11-207ENST00000563255 ZBTB7AO95365 584 aa19.25■□□□□ 0.67
CDH11-207ENST00000563255 SLFN5Q08AF3 891 aa19.25■□□□□ 0.67
CDH11-207ENST00000563255 DCTN1Q14203 1278 aa19.25■□□□□ 0.67
CDH11-207ENST00000563255 MCM10Q7L590 875 aa19.25■□□□□ 0.67
CDH11-207ENST00000563255 IL17REQ8NFR9 667 aa19.25■□□□□ 0.67
CDH11-207ENST00000563255 TOGARAM1Q9Y4F4 1720 aa19.25■□□□□ 0.67
CDH11-207ENST00000563255 KDM3BQ7LBC6 1761 aa19.24■□□□□ 0.67
CDH11-207ENST00000563255 E9PSI1 815 aa19.24■□□□□ 0.67
CDH11-207ENST00000563255 TRMT2AQ8IZ69 625 aaKnown RBP19.24■□□□□ 0.67
CDH11-207ENST00000563255 DCAF5Q96JK2 942 aa19.24■□□□□ 0.67
CDH11-207ENST00000563255 STK32BQ9NY57 414 aa19.24■□□□□ 0.67
CDH11-207ENST00000563255 CASZ1Q86V15 1759 aa19.24■□□□□ 0.67
CDH11-207ENST00000563255 RNMTO43148 476 aaKnown RBP19.23■□□□□ 0.67
CDH11-207ENST00000563255 CDCA7LQ96GN5 454 aa19.23■□□□□ 0.67
CDH11-207ENST00000563255 ACSBG1Q96GR2 724 aa19.23■□□□□ 0.67
CDH11-207ENST00000563255 LGR6Q9HBX8 967 aa19.23■□□□□ 0.67
CDH11-207ENST00000563255 KDM6AO15550 1401 aaPredicted RBP19.23■□□□□ 0.67
CDH11-207ENST00000563255 KAT6BQ8WYB5 2073 aa19.23■□□□□ 0.67
CDH11-207ENST00000563255 RGPD3A6NKT7 1758 aaPredicted RBP19.22■□□□□ 0.67
CDH11-207ENST00000563255 RGPD4Q7Z3J3 1758 aa19.22■□□□□ 0.67
CDH11-207ENST00000563255 CENPBP07199 599 aaPredicted RBP19.22■□□□□ 0.67
CDH11-207ENST00000563255 MPRIPQ6WCQ1 1025 aa19.22■□□□□ 0.67
CDH11-207ENST00000563255 THUMPD2Q9BTF0 503 aaKnown RBP19.22■□□□□ 0.67
CDH11-207ENST00000563255 SPINK5Q9NQ38 1064 aaPredicted RBP19.22■□□□□ 0.67
CDH11-207ENST00000563255 ATF5Q9Y2D1 282 aaPredicted RBP19.22■□□□□ 0.67
CDH11-207ENST00000563255 DOT1LQ8TEK3 1739 aa19.22■□□□□ 0.67
CDH11-207ENST00000563255 MRC1P22897 1456 aa19.22■□□□□ 0.67
CDH11-207ENST00000563255 ZNF853P0CG23 659 aa19.21■□□□□ 0.67
CDH11-207ENST00000563255 GNAI1P63096 354 aa19.21■□□□□ 0.67
CDH11-207ENST00000563255 SLC15A2Q16348 729 aa19.21■□□□□ 0.67
CDH11-207ENST00000563255 DDX54Q8TDD1 881 aaKnown RBP19.21■□□□□ 0.67
CDH11-207ENST00000563255 CFAP44Q96MT7 982 aa19.21■□□□□ 0.67
CDH11-207ENST00000563255 IFT57Q9NWB7 429 aa19.21■□□□□ 0.67
CDH11-207ENST00000563255 MYH16Q9H6N6 1097 aa19.2■□□□□ 0.66
CDH11-207ENST00000563255 BABAM1Q9NWV8 329 aa19.2■□□□□ 0.66
CDH11-207ENST00000563255 UTRNP46939 3433 aa19.19■□□□□ 0.66
CDH11-207ENST00000563255 DUSP27Q5VZP5 1158 aa19.19■□□□□ 0.66
CDH11-207ENST00000563255 TAF7Q15545 349 aaPredicted RBP19.18■□□□□ 0.66
CDH11-207ENST00000563255 ERVV-2B6SEH9 535 aa19.17■□□□□ 0.66
CDH11-207ENST00000563255 CHL1O00533 1208 aa19.17■□□□□ 0.66
CDH11-207ENST00000563255 TEFQ10587 303 aa19.17■□□□□ 0.66
CDH11-207ENST00000563255 PAPPAQ13219 1627 aa19.17■□□□□ 0.66
CDH11-207ENST00000563255 PTGER2P43116 358 aa19.16■□□□□ 0.66
CDH11-207ENST00000563255 SLC52A2Q9HAB3 445 aa19.16■□□□□ 0.66
CDH11-207ENST00000563255 LAS1LQ9Y4W2 734 aaKnown RBP19.16■□□□□ 0.66
CDH11-207ENST00000563255 UBR2Q8IWV8 1755 aa19.15■□□□□ 0.66
CDH11-207ENST00000563255 FANCIQ9NVI1 1328 aa19.15■□□□□ 0.66
CDH11-207ENST00000563255 MBIPQ9NS73 344 aa19.14■□□□□ 0.65
CDH11-207ENST00000563255 CABP4P57796 275 aa19.13■□□□□ 0.65
CDH11-207ENST00000563255 MTFR1LQ9H019 292 aa19.13■□□□□ 0.65
CDH11-207ENST00000563255 CACNA1FO60840 1977 aa19.13■□□□□ 0.65
CDH11-207ENST00000563255 NHSQ6T4R5 1651 aa19.12■□□□□ 0.65
CDH11-207ENST00000563255 ZNF784Q8NCA9 323 aaPredicted RBP19.12■□□□□ 0.65
CDH11-207ENST00000563255 NFATC2IPQ8NCF5 419 aa19.12■□□□□ 0.65
CDH11-207ENST00000563255 TSR2Q969E8 191 aaKnown RBP19.12■□□□□ 0.65
CDH11-207ENST00000563255 FHDC1Q9C0D6 1143 aaPredicted RBP19.12■□□□□ 0.65
CDH11-207ENST00000563255 TSPYL4Q9UJ04 414 aa19.12■□□□□ 0.65
CDH11-207ENST00000563255 BTBD11A6QL63 1104 aa19.11■□□□□ 0.65
CDH11-207ENST00000563255 SYT17Q9BSW7 474 aa19.11■□□□□ 0.65
CDH11-207ENST00000563255 CT47B1P0C2W7 299 aaPredicted RBP19.09■□□□□ 0.65
CDH11-207ENST00000563255 LRRC4BQ9NT99 713 aa19.09■□□□□ 0.65
CDH11-207ENST00000563255 MIS18AQ9NYP9 233 aa19.09■□□□□ 0.65
CDH11-207ENST00000563255 EXOSC9Q06265 439 aaKnown RBP19.08■□□□□ 0.64
CDH11-207ENST00000563255 SYTL4Q96C24 671 aaPredicted RBP19.08■□□□□ 0.64
CDH11-207ENST00000563255 TMOD3Q9NYL9 352 aa19.08■□□□□ 0.64
CDH11-207ENST00000563255 BTAF1O14981 1849 aa19.07■□□□□ 0.64
CDH11-207ENST00000563255 ZNF827Q17R98 1081 aa19.07■□□□□ 0.64
CDH11-207ENST00000563255 ARXQ96QS3 562 aa19.07■□□□□ 0.64
CDH11-207ENST00000563255 SGIP1Q9BQI5 828 aa19.07■□□□□ 0.64
CDH11-207ENST00000563255 CHD4Q14839 1912 aa19.06■□□□□ 0.64
CDH11-207ENST00000563255 ZNF790Q6PG37 636 aa19.06■□□□□ 0.64
CDH11-207ENST00000563255 KLHL34Q8N239 644 aa19.06■□□□□ 0.64
CDH11-207ENST00000563255 LAMB4A4D0S4 1761 aa19.06■□□□□ 0.64
CDH11-207ENST00000563255 SOS1Q07889 1333 aaPredicted RBP19.05■□□□□ 0.64
CDH11-207ENST00000563255 C5P01031 1676 aa19.05■□□□□ 0.64
CDH11-207ENST00000563255 PRIM1P49642 420 aaKnown RBP19.05■□□□□ 0.64
CDH11-207ENST00000563255 EIF4A1P60842 406 aaKnown RBP19.05■□□□□ 0.64
CDH11-207ENST00000563255 HEG1Q9ULI3 1381 aa19.05■□□□□ 0.64
CDH11-207ENST00000563255 KCNQ4P56696 695 aa19.04■□□□□ 0.64
CDH11-207ENST00000563255 SLC27A3Q5K4L6 730 aa19.04■□□□□ 0.64
CDH11-207ENST00000563255 PIGBQ92521 554 aa19.04■□□□□ 0.64
CDH11-207ENST00000563255 ZNF831Q5JPB2 1677 aa19.04■□□□□ 0.64
CDH11-207ENST00000563255 KCNQ3O43525 872 aa19.03■□□□□ 0.64
CDH11-207ENST00000563255 TWISTNBQ3B726 338 aaPredicted RBP19.03■□□□□ 0.64
CDH11-207ENST00000563255 C8orf58Q8NAV2 365 aa19.03■□□□□ 0.64
CDH11-207ENST00000563255 ZNF428Q96B54 188 aa19.03■□□□□ 0.64
CDH11-207ENST00000563255 KCPQ6ZWJ8 1503 aa19.03■□□□□ 0.64
CDH11-207ENST00000563255 VAMP4O75379 141 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms