RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 FHDC1Q9C0D6 1143 aaPredicted RBP6.56□□□□□ -1.36
SHCBP1-202ENST00000563219 MBIPQ9NS73 344 aa6.56□□□□□ -1.36
SHCBP1-202ENST00000563219 GPR25O00155 361 aa6.55□□□□□ -1.36
SHCBP1-202ENST00000563219 MAP7D1Q3KQU3 841 aa6.55□□□□□ -1.36
SHCBP1-202ENST00000563219 FNBP4Q8N3X1 1017 aaPredicted RBP6.55□□□□□ -1.36
SHCBP1-202ENST00000563219 GTPBP3Q969Y2 492 aaKnown RBP6.55□□□□□ -1.36
SHCBP1-202ENST00000563219 CELA2BP08218 269 aaPredicted RBP6.54□□□□□ -1.36
SHCBP1-202ENST00000563219 SOX11P35716 441 aa6.54□□□□□ -1.36
SHCBP1-202ENST00000563219 PHKA2P46019 1235 aa6.54□□□□□ -1.36
SHCBP1-202ENST00000563219 SEMA3FQ13275 785 aa6.54□□□□□ -1.36
SHCBP1-202ENST00000563219 OXLD1Q5BKU9 147 aa6.54□□□□□ -1.36
SHCBP1-202ENST00000563219 TMEM214Q6NUQ4 689 aaKnown RBP6.54□□□□□ -1.36
SHCBP1-202ENST00000563219 PROSER2Q86WR7 435 aaPredicted RBP6.54□□□□□ -1.36
SHCBP1-202ENST00000563219 TRERF1Q96PN7 1200 aa6.54□□□□□ -1.36
SHCBP1-202ENST00000563219 NUCKS1Q9H1E3 243 aaKnown RBP6.54□□□□□ -1.36
SHCBP1-202ENST00000563219 ETNK1Q9HBU6 452 aa6.54□□□□□ -1.36
SHCBP1-202ENST00000563219 A0A1B0GTH6 734 aa6.53□□□□□ -1.36
SHCBP1-202ENST00000563219 STAU1O95793 577 aaKnown RBP6.53□□□□□ -1.36
SHCBP1-202ENST00000563219 GTF2E1P29083 439 aaPredicted RBP6.53□□□□□ -1.36
SHCBP1-202ENST00000563219 RASSF7Q02833 373 aa6.53□□□□□ -1.36
SHCBP1-202ENST00000563219 GNASQ5JWF2 1037 aa6.53□□□□□ -1.36
SHCBP1-202ENST00000563219 IGF1RP08069 1367 aa6.53□□□□□ -1.36
SHCBP1-202ENST00000563219 RNF225M0QZC1 329 aaPredicted RBP6.52□□□□□ -1.37
SHCBP1-202ENST00000563219 MAP3K10Q02779 954 aa6.52□□□□□ -1.37
SHCBP1-202ENST00000563219 C4orf17Q53FE4 359 aa6.52□□□□□ -1.37
SHCBP1-202ENST00000563219 PPARGC1BQ86YN6 1023 aaKnown RBP6.52□□□□□ -1.37
SHCBP1-202ENST00000563219 TMEM151AQ8N4L1 468 aa6.52□□□□□ -1.37
SHCBP1-202ENST00000563219 PLPP7Q8NBV4 271 aa6.52□□□□□ -1.37
SHCBP1-202ENST00000563219 GDF11O95390 407 aa6.51□□□□□ -1.37
SHCBP1-202ENST00000563219 INHAP05111 366 aa6.51□□□□□ -1.37
SHCBP1-202ENST00000563219 THBS1P07996 1170 aa6.51□□□□□ -1.37
SHCBP1-202ENST00000563219 MX2P20592 715 aa6.51□□□□□ -1.37
SHCBP1-202ENST00000563219 SCNN1DP51172 638 aa6.51□□□□□ -1.37
SHCBP1-202ENST00000563219 MARSP56192 900 aaKnown RBP6.51□□□□□ -1.37
SHCBP1-202ENST00000563219 WWC1Q8IX03 1113 aa6.51□□□□□ -1.37
SHCBP1-202ENST00000563219 RHBDD1Q8TEB9 315 aa6.51□□□□□ -1.37
SHCBP1-202ENST00000563219 CFHR5Q9BXR6 569 aa6.51□□□□□ -1.37
SHCBP1-202ENST00000563219 GPAMQ9HCL2 828 aa6.51□□□□□ -1.37
SHCBP1-202ENST00000563219 ENAMQ9NRM1 1142 aa6.51□□□□□ -1.37
SHCBP1-202ENST00000563219 MSX1P28360 303 aa6.5□□□□□ -1.37
SHCBP1-202ENST00000563219 LBRQ14739 615 aaKnown RBP6.5□□□□□ -1.37
SHCBP1-202ENST00000563219 TLR1Q15399 786 aa6.5□□□□□ -1.37
SHCBP1-202ENST00000563219 SCARF2Q96GP6 870 aaPredicted RBP6.5□□□□□ -1.37
SHCBP1-202ENST00000563219 ALG2Q9H553 416 aa6.5□□□□□ -1.37
SHCBP1-202ENST00000563219 CSB-PGBD3P0DP91 1061 aa6.49□□□□□ -1.37
SHCBP1-202ENST00000563219 BCRP11274 1271 aa6.49□□□□□ -1.37
SHCBP1-202ENST00000563219 GDF10P55107 478 aa6.49□□□□□ -1.37
SHCBP1-202ENST00000563219 PGBD3Q8N328 593 aa6.49□□□□□ -1.37
SHCBP1-202ENST00000563219 KCTD17Q8N5Z5 321 aa6.49□□□□□ -1.37
SHCBP1-202ENST00000563219 ACDQ96AP0 544 aa6.49□□□□□ -1.37
SHCBP1-202ENST00000563219 LRRC4BQ9NT99 713 aa6.49□□□□□ -1.37
SHCBP1-202ENST00000563219 NSFL1CQ9UNZ2 370 aaKnown RBP6.49□□□□□ -1.37
SHCBP1-202ENST00000563219 IRS1P35568 1242 aa6.48□□□□□ -1.37
SHCBP1-202ENST00000563219 SMTNP53814 917 aa6.48□□□□□ -1.37
SHCBP1-202ENST00000563219 UBAP2LQ14157 1087 aaKnown RBP6.48□□□□□ -1.37
SHCBP1-202ENST00000563219 RUBCNLQ9H714 662 aa6.48□□□□□ -1.37
SHCBP1-202ENST00000563219 PHF24Q9UPV7 400 aa6.48□□□□□ -1.37
SHCBP1-202ENST00000563219 PIK3CDO00329 1044 aa6.47□□□□□ -1.37
SHCBP1-202ENST00000563219 LZTS3O60299 673 aaPredicted RBP6.47□□□□□ -1.37
SHCBP1-202ENST00000563219 KANK3Q6NY19 840 aa6.47□□□□□ -1.37
SHCBP1-202ENST00000563219 SLC4A9Q96Q91 983 aa6.47□□□□□ -1.37
SHCBP1-202ENST00000563219 PCDHGA11Q9Y5H2 935 aa6.47□□□□□ -1.37
SHCBP1-202ENST00000563219 TMEM229AB2RXF0 380 aa6.46□□□□□ -1.38
SHCBP1-202ENST00000563219 MAP2K3P46734 347 aa6.46□□□□□ -1.38
SHCBP1-202ENST00000563219 EFHC2Q5JST6 749 aa6.46□□□□□ -1.38
SHCBP1-202ENST00000563219 NFATC2IPQ8NCF5 419 aa6.46□□□□□ -1.38
SHCBP1-202ENST00000563219 NIFKQ9BYG3 293 aaKnown RBP6.46□□□□□ -1.38
SHCBP1-202ENST00000563219 CRISPLD1Q9H336 500 aa6.46□□□□□ -1.38
SHCBP1-202ENST00000563219 CDK2AP1O14519 115 aa6.45□□□□□ -1.38
SHCBP1-202ENST00000563219 OIP5O43482 229 aa6.45□□□□□ -1.38
SHCBP1-202ENST00000563219 SKIP12755 728 aa6.45□□□□□ -1.38
SHCBP1-202ENST00000563219 MTFR1Q15390 333 aa6.45□□□□□ -1.38
SHCBP1-202ENST00000563219 EML3Q32P44 896 aa6.45□□□□□ -1.38
SHCBP1-202ENST00000563219 TBC1D9Q6ZT07 1266 aa6.45□□□□□ -1.38
SHCBP1-202ENST00000563219 BEND7Q8N7W2 519 aaPredicted RBP6.45□□□□□ -1.38
SHCBP1-202ENST00000563219 NEDD1Q8NHV4 660 aa6.45□□□□□ -1.38
SHCBP1-202ENST00000563219 C1orf216Q8TAB5 229 aa6.45□□□□□ -1.38
SHCBP1-202ENST00000563219 KLRG1Q96E93 195 aa6.45□□□□□ -1.38
SHCBP1-202ENST00000563219 OXCT2Q9BYC2 517 aaPredicted RBP6.45□□□□□ -1.38
SHCBP1-202ENST00000563219 NDFIP2Q9NV92 336 aa6.45□□□□□ -1.38
SHCBP1-202ENST00000563219 SERTAD1Q9UHV2 236 aa6.45□□□□□ -1.38
SHCBP1-202ENST00000563219 ATXN7L1Q9ULK2 861 aaPredicted RBP6.45□□□□□ -1.38
SHCBP1-202ENST00000563219 A6NJY4 79 aa6.44□□□□□ -1.38
SHCBP1-202ENST00000563219 POM121CA8CG34 1229 aa6.44□□□□□ -1.38
SHCBP1-202ENST00000563219 SUPT5HO00267 1087 aaKnown RBP6.44□□□□□ -1.38
SHCBP1-202ENST00000563219 BNIP3LO60238 219 aa6.44□□□□□ -1.38
SHCBP1-202ENST00000563219 PLA2G4AP47712 749 aa6.44□□□□□ -1.38
SHCBP1-202ENST00000563219 ZNF295-AS1Q8N0V1 137 aa6.44□□□□□ -1.38
SHCBP1-202ENST00000563219 AIDAQ96BJ3 306 aa6.44□□□□□ -1.38
SHCBP1-202ENST00000563219 ZNF777Q9ULD5 760 aaPredicted RBP6.44□□□□□ -1.38
SHCBP1-202ENST00000563219 IQSEC3Q9UPP2 1182 aaPredicted RBP6.44□□□□□ -1.38
SHCBP1-202ENST00000563219 NOD1Q9Y239 953 aa6.44□□□□□ -1.38
SHCBP1-202ENST00000563219 DNMT3AQ9Y6K1 912 aaPredicted RBP6.44□□□□□ -1.38
SHCBP1-202ENST00000563219 CNTNAP5Q8WYK1 1306 aa6.44□□□□□ -1.38
SHCBP1-202ENST00000563219 C1orf115Q9H7X2 142 aa6.43□□□□□ -1.38
SHCBP1-202ENST00000563219 PHF20L1A8MW92 1017 aa6.42□□□□□ -1.38
SHCBP1-202ENST00000563219 C2CD2LO14523 706 aa6.42□□□□□ -1.38
SHCBP1-202ENST00000563219 BACH1O14867 736 aa6.42□□□□□ -1.38
SHCBP1-202ENST00000563219 ATP4AP20648 1035 aa6.42□□□□□ -1.38
SHCBP1-202ENST00000563219 GTF2IP78347 998 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms