RNA–Protein interactions for RNA: ENST00000562958.6

CNN2-205, Transcript of calponin 2, humanhuman

TSL 2 BASIC

Gene CNN2, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN2-205ENST00000562958 STK31Q9BXU1 1019 aa17.79■□□□□ 0.44
CNN2-205ENST00000562958 TSPYL4Q9UJ04 414 aa17.79■□□□□ 0.44
CNN2-205ENST00000562958 SALL3Q9BXA9 1300 aa17.79■□□□□ 0.44
CNN2-205ENST00000562958 ADAMTS13Q76LX8 1427 aa17.79■□□□□ 0.44
CNN2-205ENST00000562958 XRN1Q8IZH2 1706 aaKnown RBP17.79■□□□□ 0.44
CNN2-205ENST00000562958 RIMS1Q86UR5 1692 aaKnown RBP17.79■□□□□ 0.44
CNN2-205ENST00000562958 TERF1P54274 439 aa17.79■□□□□ 0.44
CNN2-205ENST00000562958 CAVIN1Q6NZI2 390 aaKnown RBP17.79■□□□□ 0.44
CNN2-205ENST00000562958 INTS4Q96HW7 963 aaKnown RBP17.79■□□□□ 0.44
CNN2-205ENST00000562958 PLEKHG1Q9ULL1 1385 aa17.78■□□□□ 0.44
CNN2-205ENST00000562958 MSNP26038 577 aaKnown RBP17.78■□□□□ 0.44
CNN2-205ENST00000562958 PTPRUQ92729 1446 aa17.78■□□□□ 0.44
CNN2-205ENST00000562958 LRRCC1Q9C099 1032 aa17.77■□□□□ 0.44
CNN2-205ENST00000562958 BABAM1Q9NWV8 329 aa17.77■□□□□ 0.44
CNN2-205ENST00000562958 CUL4AQ13619 759 aa17.77■□□□□ 0.43
CNN2-205ENST00000562958 PDLIM2Q96JY6 352 aa17.77■□□□□ 0.43
CNN2-205ENST00000562958 HSP90AB2PQ58FF8 381 aa17.76■□□□□ 0.43
CNN2-205ENST00000562958 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.76■□□□□ 0.43
CNN2-205ENST00000562958 ESYT1Q9BSJ8 1104 aa17.76■□□□□ 0.43
CNN2-205ENST00000562958 NCLP19338 710 aaKnown RBP17.76■□□□□ 0.43
CNN2-205ENST00000562958 STAP2Q9UGK3 403 aa17.76■□□□□ 0.43
CNN2-205ENST00000562958 MAP3K19Q56UN5 1328 aa17.75■□□□□ 0.43
CNN2-205ENST00000562958 IGSF1Q8N6C5 1336 aa17.75■□□□□ 0.43
CNN2-205ENST00000562958 CCDC30Q5VVM6 783 aa17.75■□□□□ 0.43
CNN2-205ENST00000562958 ZGPATQ8N5A5 531 aaKnown RBP17.75■□□□□ 0.43
CNN2-205ENST00000562958 ZDHHC9Q9Y397 364 aa17.75■□□□□ 0.43
CNN2-205ENST00000562958 APBB1O00213 710 aa17.74■□□□□ 0.43
CNN2-205ENST00000562958 MX1P20591 662 aa17.74■□□□□ 0.43
CNN2-205ENST00000562958 MCM5P33992 734 aa17.74■□□□□ 0.43
CNN2-205ENST00000562958 LRSAM1Q6UWE0 723 aa17.74■□□□□ 0.43
CNN2-205ENST00000562958 PRPF40AO75400 957 aaKnown RBP17.74■□□□□ 0.43
CNN2-205ENST00000562958 ATP8B2P98198 1209 aa17.74■□□□□ 0.43
CNN2-205ENST00000562958 MTHFSDQ2M296 383 aaKnown RBP17.74■□□□□ 0.43
CNN2-205ENST00000562958 SLC4A10Q6U841 1118 aa17.74■□□□□ 0.43
CNN2-205ENST00000562958 TMX3Q96JJ7 454 aa17.74■□□□□ 0.43
CNN2-205ENST00000562958 OFD1O75665 1012 aa17.73■□□□□ 0.43
CNN2-205ENST00000562958 BRD1O95696 1058 aa17.73■□□□□ 0.43
CNN2-205ENST00000562958 NEK4P51957 841 aa17.73■□□□□ 0.43
CNN2-205ENST00000562958 PKP1Q13835 747 aa17.73■□□□□ 0.43
CNN2-205ENST00000562958 USP54Q70EL1 1684 aa17.73■□□□□ 0.43
CNN2-205ENST00000562958 HSP90AA2PQ14568 343 aaPredicted RBP17.73■□□□□ 0.43
CNN2-205ENST00000562958 GPT2Q8TD30 523 aa17.73■□□□□ 0.43
CNN2-205ENST00000562958 SYAP1Q96A49 352 aaPredicted RBP17.73■□□□□ 0.43
CNN2-205ENST00000562958 NOL7Q9UMY1 257 aaKnown RBP17.72■□□□□ 0.43
CNN2-205ENST00000562958 FLIIQ13045 1269 aa17.72■□□□□ 0.43
CNN2-205ENST00000562958 MLECQ14165 292 aa17.72■□□□□ 0.43
CNN2-205ENST00000562958 G2E3Q7L622 706 aa17.72■□□□□ 0.43
CNN2-205ENST00000562958 RBSNQ9H1K0 784 aa17.72■□□□□ 0.43
CNN2-205ENST00000562958 ZNF500O60304 480 aaPredicted RBP17.71■□□□□ 0.43
CNN2-205ENST00000562958 KLHL34Q8N239 644 aa17.71■□□□□ 0.43
CNN2-205ENST00000562958 CHMLP26374 656 aa17.7■□□□□ 0.42
CNN2-205ENST00000562958 F6X3S4 739 aa17.7■□□□□ 0.42
CNN2-205ENST00000562958 PHF14O94880 888 aa17.7■□□□□ 0.42
CNN2-205ENST00000562958 PRIM1P49642 420 aaKnown RBP17.7■□□□□ 0.42
CNN2-205ENST00000562958 CHMP4AQ9BY43 222 aa17.7■□□□□ 0.42
CNN2-205ENST00000562958 RAB11FIP3O75154 756 aa17.69■□□□□ 0.42
CNN2-205ENST00000562958 EXOC6BQ9Y2D4 811 aa17.69■□□□□ 0.42
CNN2-205ENST00000562958 CEP170BQ9Y4F5 1589 aaPredicted RBP17.69■□□□□ 0.42
CNN2-205ENST00000562958 FKBP5Q13451 457 aaPredicted RBP17.69■□□□□ 0.42
CNN2-205ENST00000562958 DIP2AQ14689 1571 aa17.68■□□□□ 0.42
CNN2-205ENST00000562958 GNAT3A8MTJ3 354 aa17.68■□□□□ 0.42
CNN2-205ENST00000562958 CSPP1Q1MSJ5 1256 aa17.68■□□□□ 0.42
CNN2-205ENST00000562958 CCDC39Q9UFE4 941 aa17.68■□□□□ 0.42
CNN2-205ENST00000562958 PIK3C2AO00443 1686 aa17.68■□□□□ 0.42
CNN2-205ENST00000562958 TMEM63CQ9P1W3 806 aa17.67■□□□□ 0.42
CNN2-205ENST00000562958 AMPHP49418 695 aa17.67■□□□□ 0.42
CNN2-205ENST00000562958 KIAA1211Q6ZU35 1233 aa17.67■□□□□ 0.42
CNN2-205ENST00000562958 ANO2Q9NQ90 1003 aa17.67■□□□□ 0.42
CNN2-205ENST00000562958 FOXO3O43524 673 aa17.66■□□□□ 0.42
CNN2-205ENST00000562958 EYA1Q99502 592 aa17.66■□□□□ 0.42
CNN2-205ENST00000562958 MIS18AQ9NYP9 233 aa17.66■□□□□ 0.42
CNN2-205ENST00000562958 WDR33Q9C0J8 1336 aaKnown RBP17.66■□□□□ 0.42
CNN2-205ENST00000562958 MAP3K5Q99683 1374 aa17.66■□□□□ 0.42
CNN2-205ENST00000562958 ANKARQ7Z5J8 1434 aa17.66■□□□□ 0.42
CNN2-205ENST00000562958 TRIM6-TRIM34B2RNG4 842 aa17.66■□□□□ 0.42
CNN2-205ENST00000562958 SSH3Q8TE77 659 aa17.65■□□□□ 0.42
CNN2-205ENST00000562958 ZKSCAN5Q9Y2L8 839 aa17.65■□□□□ 0.42
CNN2-205ENST00000562958 PNMA6EA0A0J9YXQ4 647 aa17.64■□□□□ 0.42
CNN2-205ENST00000562958 PLEKHG5O94827 1062 aa17.64■□□□□ 0.42
CNN2-205ENST00000562958 UBTFL1P0CB47 393 aaPredicted RBP17.64■□□□□ 0.42
CNN2-205ENST00000562958 RILPL2Q969X0 211 aa17.64■□□□□ 0.42
CNN2-205ENST00000562958 SLIT1O75093 1534 aa17.64■□□□□ 0.41
CNN2-205ENST00000562958 HSPA4P34932 840 aa17.64■□□□□ 0.41
CNN2-205ENST00000562958 FAM184AQ8NB25 1140 aa17.64■□□□□ 0.41
CNN2-205ENST00000562958 RBM27Q9P2N5 1060 aaKnown RBP17.64■□□□□ 0.41
CNN2-205ENST00000562958 SYCE3A1L190 88 aa17.63■□□□□ 0.41
CNN2-205ENST00000562958 TMEM87AQ8NBN3 555 aa17.63■□□□□ 0.41
CNN2-205ENST00000562958 TSPY26PQ9H489 355 aa17.63■□□□□ 0.41
CNN2-205ENST00000562958 CRYBG1Q9Y4K1 1723 aa17.63■□□□□ 0.41
CNN2-205ENST00000562958 NWD1Q149M9 1564 aa17.63■□□□□ 0.41
CNN2-205ENST00000562958 TAF7Q15545 349 aaPredicted RBP17.63■□□□□ 0.41
CNN2-205ENST00000562958 PALD1Q9ULE6 856 aa17.63■□□□□ 0.41
CNN2-205ENST00000562958 LRRFIP2Q9Y608 721 aaKnown RBP17.63■□□□□ 0.41
CNN2-205ENST00000562958 HOXB7P09629 217 aa17.62■□□□□ 0.41
CNN2-205ENST00000562958 EID1Q9Y6B2 187 aa17.62■□□□□ 0.41
CNN2-205ENST00000562958 ARHGAP23Q9P227 1491 aa17.62■□□□□ 0.41
CNN2-205ENST00000562958 UVSSAQ2YD98 709 aa17.62■□□□□ 0.41
CNN2-205ENST00000562958 HSP90AB4PQ58FF6 505 aa17.62■□□□□ 0.41
CNN2-205ENST00000562958 PLPPR3Q6T4P5 718 aa17.62■□□□□ 0.41
CNN2-205ENST00000562958 MARF1Q9Y4F3 1742 aaKnown RBP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms