RNA–Protein interactions for RNA: ENST00000562913.5

KLHDC4-210, Transcript of kelch domain containing 4, humanhuman

TSL 3

Gene KLHDC4, Length 875 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-210ENST00000562913 AMIGO3Q86WK7 504 aa22.24■■□□□ 1.15
KLHDC4-210ENST00000562913 LINC00116Q8NCU8 138 aa22.24■■□□□ 1.15
KLHDC4-210ENST00000562913 FLAD1Q8NFF5 587 aa22.24■■□□□ 1.15
KLHDC4-210ENST00000562913 YY1P25490 414 aa22.23■■□□□ 1.15
KLHDC4-210ENST00000562913 ATP6V1AP38606 617 aa22.23■■□□□ 1.15
KLHDC4-210ENST00000562913 ITPK1Q13572 414 aa22.23■■□□□ 1.15
KLHDC4-210ENST00000562913 SMIM5Q71RC9 77 aa22.23■■□□□ 1.15
KLHDC4-210ENST00000562913 UBR3Q6ZT12 1888 aa22.23■■□□□ 1.15
KLHDC4-210ENST00000562913 NPC1L1Q9UHC9 1359 aa22.23■■□□□ 1.15
KLHDC4-210ENST00000562913 PHF14O94880 888 aa22.22■■□□□ 1.15
KLHDC4-210ENST00000562913 HMOX1P09601 288 aa22.21■■□□□ 1.15
KLHDC4-210ENST00000562913 CABP4P57796 275 aa22.21■■□□□ 1.15
KLHDC4-210ENST00000562913 DIAPH1O60610 1272 aaKnown RBP22.2■■□□□ 1.14
KLHDC4-210ENST00000562913 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.19■■□□□ 1.14
KLHDC4-210ENST00000562913 RBM42Q9BTD8 480 aaKnown RBP22.19■■□□□ 1.14
KLHDC4-210ENST00000562913 SLC4A9Q96Q91 983 aa22.18■■□□□ 1.14
KLHDC4-210ENST00000562913 GNPATO15228 680 aa22.17■■□□□ 1.14
KLHDC4-210ENST00000562913 SSFA2P28290 1259 aa22.17■■□□□ 1.14
KLHDC4-210ENST00000562913 NFATC2IPQ8NCF5 419 aa22.17■■□□□ 1.14
KLHDC4-210ENST00000562913 SCN11AQ9UI33 1791 aa22.17■■□□□ 1.14
KLHDC4-210ENST00000562913 NLGN2Q8NFZ4 835 aa22.16■■□□□ 1.14
KLHDC4-210ENST00000562913 ZNF831Q5JPB2 1677 aa22.15■■□□□ 1.14
KLHDC4-210ENST00000562913 AKAP4Q5JQC9 854 aa22.15■■□□□ 1.14
KLHDC4-210ENST00000562913 COL3A1P02461 1466 aaPredicted RBP22.15■■□□□ 1.14
KLHDC4-210ENST00000562913 GOLGB1Q14789 3259 aaKnown RBP22.14■■□□□ 1.14
KLHDC4-210ENST00000562913 PTCD1O75127 700 aaKnown RBP22.13■■□□□ 1.13
KLHDC4-210ENST00000562913 GPR162Q16538 588 aa22.13■■□□□ 1.13
KLHDC4-210ENST00000562913 COL5A3P25940 1745 aaPredicted RBP22.13■■□□□ 1.13
KLHDC4-210ENST00000562913 U2SURPO15042 1029 aaKnown RBP22.12■■□□□ 1.13
KLHDC4-210ENST00000562913 LGR6Q9HBX8 967 aa22.12■■□□□ 1.13
KLHDC4-210ENST00000562913 MTHFSDQ2M296 383 aaKnown RBP22.11■■□□□ 1.13
KLHDC4-210ENST00000562913 PELP1Q8IZL8 1130 aaKnown RBP22.11■■□□□ 1.13
KLHDC4-210ENST00000562913 VIRMAQ69YN4 1812 aaKnown RBP22.1■■□□□ 1.13
KLHDC4-210ENST00000562913 RTCBQ9Y3I0 505 aaKnown RBP22.1■■□□□ 1.13
KLHDC4-210ENST00000562913 RNMTO43148 476 aaKnown RBP22.09■■□□□ 1.13
KLHDC4-210ENST00000562913 RC3H1Q5TC82 1133 aaKnown RBP22.09■■□□□ 1.13
KLHDC4-210ENST00000562913 SLC52A2Q9HAB3 445 aa22.09■■□□□ 1.13
KLHDC4-210ENST00000562913 CHD4Q14839 1912 aa22.09■■□□□ 1.13
KLHDC4-210ENST00000562913 CNTNAP4Q9C0A0 1308 aa22.08■■□□□ 1.13
KLHDC4-210ENST00000562913 TRAPPC3LQ5T215 181 aa22.08■■□□□ 1.13
KLHDC4-210ENST00000562913 MYH14Q7Z406 1995 aaKnown RBP22.08■■□□□ 1.12
KLHDC4-210ENST00000562913 CD2APQ9Y5K6 639 aa22.07■■□□□ 1.12
KLHDC4-210ENST00000562913 MRC1P22897 1456 aa22.07■■□□□ 1.12
KLHDC4-210ENST00000562913 TJP1Q07157 1748 aa22.06■■□□□ 1.12
KLHDC4-210ENST00000562913 ADAMTS7Q9UKP4 1686 aa22.05■■□□□ 1.12
KLHDC4-210ENST00000562913 RPS6KA4O75676 772 aa22.05■■□□□ 1.12
KLHDC4-210ENST00000562913 ARHGEF1Q92888 912 aaKnown RBP22.05■■□□□ 1.12
KLHDC4-210ENST00000562913 CFAP53Q96M91 514 aa22.05■■□□□ 1.12
KLHDC4-210ENST00000562913 ADRA2BP18089 450 aa22.04■■□□□ 1.12
KLHDC4-210ENST00000562913 PPP2R1AP30153 589 aa22.04■■□□□ 1.12
KLHDC4-210ENST00000562913 CRKLP46109 303 aaKnown RBP22.04■■□□□ 1.12
KLHDC4-210ENST00000562913 SLC39A6Q13433 755 aa22.04■■□□□ 1.12
KLHDC4-210ENST00000562913 CICQ96RK0 1608 aaPredicted RBP22.03■■□□□ 1.12
KLHDC4-210ENST00000562913 YBX3P16989 372 aaKnown RBP eCLIP22.03■■□□□ 1.12
KLHDC4-210ENST00000562913 MMP10P09238 476 aa22.02■■□□□ 1.12
KLHDC4-210ENST00000562913 RFC4P35249 363 aa22.02■■□□□ 1.12
KLHDC4-210ENST00000562913 C4AP0C0L4 1744 aa22.01■■□□□ 1.11
KLHDC4-210ENST00000562913 DNAJC10Q8IXB1 793 aa22■■□□□ 1.11
KLHDC4-210ENST00000562913 NLGN1Q8N2Q7 840 aa22■■□□□ 1.11
KLHDC4-210ENST00000562913 ZNF784Q8NCA9 323 aaPredicted RBP22■■□□□ 1.11
KLHDC4-210ENST00000562913 GAS2L2Q8NHY3 880 aa22■■□□□ 1.11
KLHDC4-210ENST00000562913 KCPQ6ZWJ8 1503 aa22■■□□□ 1.11
KLHDC4-210ENST00000562913 GNAT3A8MTJ3 354 aa21.99■■□□□ 1.11
KLHDC4-210ENST00000562913 GYS1P13807 737 aa21.99■■□□□ 1.11
KLHDC4-210ENST00000562913 PRKAR2BP31323 418 aa21.99■■□□□ 1.11
KLHDC4-210ENST00000562913 PHACTR3Q96KR7 559 aa21.99■■□□□ 1.11
KLHDC4-210ENST00000562913 NUDCQ9Y266 331 aa21.99■■□□□ 1.11
KLHDC4-210ENST00000562913 GRIN3BO60391 1043 aa21.98■■□□□ 1.11
KLHDC4-210ENST00000562913 INTS5Q6P9B9 1019 aaKnown RBP21.98■■□□□ 1.11
KLHDC4-210ENST00000562913 IL17REQ8NFR9 667 aa21.98■■□□□ 1.11
KLHDC4-210ENST00000562913 RSPH6AQ9H0K4 717 aa21.98■■□□□ 1.11
KLHDC4-210ENST00000562913 U2AF1L5P0DN76 240 aaPredicted RBP21.96■■□□□ 1.11
KLHDC4-210ENST00000562913 U2AF1Q01081 240 aaKnown RBP eCLIP21.96■■□□□ 1.11
KLHDC4-210ENST00000562913 TEFQ10587 303 aa21.96■■□□□ 1.11
KLHDC4-210ENST00000562913 CCDC87Q9NVE4 849 aa21.96■■□□□ 1.11
KLHDC4-210ENST00000562913 SRP68Q9UHB9 627 aaKnown RBP21.96■■□□□ 1.11
KLHDC4-210ENST00000562913 WWC3Q9ULE0 1092 aa21.96■■□□□ 1.11
KLHDC4-210ENST00000562913 UBR2Q8IWV8 1755 aa21.95■■□□□ 1.1
KLHDC4-210ENST00000562913 CYP19A1P11511 503 aaPredicted RBP21.95■■□□□ 1.1
KLHDC4-210ENST00000562913 TTC5Q8N0Z6 440 aa21.94■■□□□ 1.1
KLHDC4-210ENST00000562913 USP42Q9H9J4 1324 aaKnown RBP21.94■■□□□ 1.1
KLHDC4-210ENST00000562913 SIPA1L3O60292 1781 aaPredicted RBP21.94■■□□□ 1.1
KLHDC4-210ENST00000562913 KIF13BQ9NQT8 1826 aa21.93■■□□□ 1.1
KLHDC4-210ENST00000562913 SOS1Q07889 1333 aaPredicted RBP21.92■■□□□ 1.1
KLHDC4-210ENST00000562913 FKBP8Q14318 412 aa21.92■■□□□ 1.1
KLHDC4-210ENST00000562913 VSIG10Q8N0Z9 540 aa21.92■■□□□ 1.1
KLHDC4-210ENST00000562913 PARP3Q9Y6F1 533 aa21.92■■□□□ 1.1
KLHDC4-210ENST00000562913 FCHSD2O94868 740 aa21.91■■□□□ 1.1
KLHDC4-210ENST00000562913 ZNF790Q6PG37 636 aa21.91■■□□□ 1.1
KLHDC4-210ENST00000562913 ZBTB1Q9Y2K1 713 aa21.91■■□□□ 1.1
KLHDC4-210ENST00000562913 C10orf71Q711Q0 1435 aa21.9■■□□□ 1.1
KLHDC4-210ENST00000562913 CEMIPQ8WUJ3 1361 aa21.9■■□□□ 1.1
KLHDC4-210ENST00000562913 N4BP2Q86UW6 1770 aaPredicted RBP21.9■■□□□ 1.1
KLHDC4-210ENST00000562913 ZNF496Q96IT1 587 aaPredicted RBP21.9■■□□□ 1.1
KLHDC4-210ENST00000562913 PXDNLA1KZ92 1463 aa21.9■■□□□ 1.1
KLHDC4-210ENST00000562913 KIAA1551Q9HCM1 1747 aa21.89■■□□□ 1.1
KLHDC4-210ENST00000562913 ZPR1O75312 459 aa21.88■■□□□ 1.09
KLHDC4-210ENST00000562913 USPL1Q5W0Q7 1092 aa21.88■■□□□ 1.09
KLHDC4-210ENST00000562913 COL15A1P39059 1388 aa21.87■■□□□ 1.09
KLHDC4-210ENST00000562913 A0A0G2JLW4 131 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms