RNA–Protein interactions for RNA: ENST00000562791.1

CHD9-206, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 242 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-206ENST00000562791 THBS1P07996 1170 aa9.71□□□□□ -0.86
CHD9-206ENST00000562791 C4orf17Q53FE4 359 aa9.71□□□□□ -0.86
CHD9-206ENST00000562791 NCOA4Q13772 614 aa9.7□□□□□ -0.86
CHD9-206ENST00000562791 TMEM214Q6NUQ4 689 aaKnown RBP9.7□□□□□ -0.86
CHD9-206ENST00000562791 DEPDC4Q8N2C3 294 aa9.7□□□□□ -0.86
CHD9-206ENST00000562791 FNBP4Q8N3X1 1017 aaPredicted RBP9.7□□□□□ -0.86
CHD9-206ENST00000562791 PCDHGA11Q9Y5H2 935 aa9.7□□□□□ -0.86
CHD9-206ENST00000562791 USP17L5A8MUK1 530 aa9.69□□□□□ -0.86
CHD9-206ENST00000562791 EML3Q32P44 896 aa9.69□□□□□ -0.86
CHD9-206ENST00000562791 NFATC2IPQ8NCF5 419 aa9.69□□□□□ -0.86
CHD9-206ENST00000562791 GPAMQ9HCL2 828 aa9.69□□□□□ -0.86
CHD9-206ENST00000562791 FAM181BA6NEQ2 426 aa9.68□□□□□ -0.86
CHD9-206ENST00000562791 GNASQ5JWF2 1037 aa9.68□□□□□ -0.86
CHD9-206ENST00000562791 HDGFL1Q5TGJ6 251 aa9.68□□□□□ -0.86
CHD9-206ENST00000562791 PROSER2Q86WR7 435 aaPredicted RBP9.68□□□□□ -0.86
CHD9-206ENST00000562791 WHAMMQ8TF30 809 aa9.68□□□□□ -0.86
CHD9-206ENST00000562791 GTPBP3Q969Y2 492 aaKnown RBP9.68□□□□□ -0.86
CHD9-206ENST00000562791 SERTAD1Q9UHV2 236 aa9.68□□□□□ -0.86
CHD9-206ENST00000562791 F11P03951 625 aa9.67□□□□□ -0.86
CHD9-206ENST00000562791 ZNF385CQ66K41 422 aaPredicted RBP9.67□□□□□ -0.86
CHD9-206ENST00000562791 TBC1D9Q6ZT07 1266 aa9.67□□□□□ -0.86
CHD9-206ENST00000562791 PPARGC1BQ86YN6 1023 aaKnown RBP9.67□□□□□ -0.86
CHD9-206ENST00000562791 RHBDD1Q8TEB9 315 aa9.67□□□□□ -0.86
CHD9-206ENST00000562791 USP3Q9Y6I4 520 aa9.67□□□□□ -0.86
CHD9-206ENST00000562791 SLURP2P0DP57 97 aa9.66□□□□□ -0.86
CHD9-206ENST00000562791 GTF2IP78347 998 aa9.66□□□□□ -0.86
CHD9-206ENST00000562791 GMCL1Q96IK5 515 aa9.66□□□□□ -0.86
CHD9-206ENST00000562791 A0A1B0GTH6 734 aa9.65□□□□□ -0.86
CHD9-206ENST00000562791 H7C1W4 665 aa9.65□□□□□ -0.86
CHD9-206ENST00000562791 ADAMTS2O95450 1211 aa9.65□□□□□ -0.86
CHD9-206ENST00000562791 PLA2G4AP47712 749 aa9.65□□□□□ -0.86
CHD9-206ENST00000562791 SMTNP53814 917 aa9.65□□□□□ -0.86
CHD9-206ENST00000562791 ZNF295-AS1Q8N0V1 137 aa9.65□□□□□ -0.86
CHD9-206ENST00000562791 NUCKS1Q9H1E3 243 aaKnown RBP9.65□□□□□ -0.86
CHD9-206ENST00000562791 NOD1Q9Y239 953 aa9.65□□□□□ -0.86
CHD9-206ENST00000562791 USP17L3A6NCW0 530 aa9.64□□□□□ -0.87
CHD9-206ENST00000562791 USP17L4A6NCW7 530 aa9.64□□□□□ -0.87
CHD9-206ENST00000562791 GTF2E1P29083 439 aaPredicted RBP9.64□□□□□ -0.87
CHD9-206ENST00000562791 USP17L2Q6R6M4 530 aa9.64□□□□□ -0.87
CHD9-206ENST00000562791 USP17L1Q7RTZ2 530 aa9.64□□□□□ -0.87
CHD9-206ENST00000562791 RUBCNLQ9H714 662 aa9.64□□□□□ -0.87
CHD9-206ENST00000562791 MSX1P28360 303 aa9.63□□□□□ -0.87
CHD9-206ENST00000562791 UBAP2LQ14157 1087 aaKnown RBP9.63□□□□□ -0.87
CHD9-206ENST00000562791 MTFR1Q15390 333 aa9.63□□□□□ -0.87
CHD9-206ENST00000562791 GLMNQ92990 594 aa9.63□□□□□ -0.87
CHD9-206ENST00000562791 SLC4A9Q96Q91 983 aa9.63□□□□□ -0.87
CHD9-206ENST00000562791 IQSEC3Q9UPP2 1182 aaPredicted RBP9.63□□□□□ -0.87
CHD9-206ENST00000562791 KIAA1024Q9UPX6 916 aa9.63□□□□□ -0.87
CHD9-206ENST00000562791 LZTS3O60299 673 aaPredicted RBP9.62□□□□□ -0.87
CHD9-206ENST00000562791 SRSF11Q05519 484 aaKnown RBP9.62□□□□□ -0.87
CHD9-206ENST00000562791 PLEKHM2Q8IWE5 1019 aa9.62□□□□□ -0.87
CHD9-206ENST00000562791 SVOPQ8N4V2 548 aa9.62□□□□□ -0.87
CHD9-206ENST00000562791 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.62□□□□□ -0.87
CHD9-206ENST00000562791 MBIPQ9NS73 344 aa9.62□□□□□ -0.87
CHD9-206ENST00000562791 ZNF358Q9NW07 568 aa9.62□□□□□ -0.87
CHD9-206ENST00000562791 A6NJY4 79 aa9.61□□□□□ -0.87
CHD9-206ENST00000562791 ATP9BO43861 1147 aa9.61□□□□□ -0.87
CHD9-206ENST00000562791 ATP4AP20648 1035 aa9.61□□□□□ -0.87
CHD9-206ENST00000562791 PSME1Q06323 249 aa9.61□□□□□ -0.87
CHD9-206ENST00000562791 CLDN10P78369 228 aa9.6□□□□□ -0.87
CHD9-206ENST00000562791 LYPD4Q6UWN0 246 aa9.6□□□□□ -0.87
CHD9-206ENST00000562791 IGF1RP08069 1367 aa9.6□□□□□ -0.87
CHD9-206ENST00000562791 A6NJR5 290 aa9.59□□□□□ -0.87
CHD9-206ENST00000562791 ARHGEF15O94989 841 aa9.59□□□□□ -0.87
CHD9-206ENST00000562791 FOXR1Q6PIV2 292 aa9.59□□□□□ -0.87
CHD9-206ENST00000562791 TRERF1Q96PN7 1200 aa9.59□□□□□ -0.87
CHD9-206ENST00000562791 ZBTB7BO15156 539 aaPredicted RBP9.58□□□□□ -0.88
CHD9-206ENST00000562791 EPHA4P54764 986 aa9.58□□□□□ -0.88
CHD9-206ENST00000562791 NIFKQ9BYG3 293 aaKnown RBP9.58□□□□□ -0.88
CHD9-206ENST00000562791 ADAMTS8Q9UP79 889 aa9.58□□□□□ -0.88
CHD9-206ENST00000562791 CDK2AP1O14519 115 aa9.57□□□□□ -0.88
CHD9-206ENST00000562791 TPCN2Q8NHX9 752 aa9.57□□□□□ -0.88
CHD9-206ENST00000562791 CRISPLD1Q9H336 500 aa9.57□□□□□ -0.88
CHD9-206ENST00000562791 CELA2BP08218 269 aaPredicted RBP9.56□□□□□ -0.88
CHD9-206ENST00000562791 CSB-PGBD3P0DP91 1061 aa9.56□□□□□ -0.88
CHD9-206ENST00000562791 MX2P20592 715 aa9.56□□□□□ -0.88
CHD9-206ENST00000562791 PGBD3Q8N328 593 aa9.56□□□□□ -0.88
CHD9-206ENST00000562791 ZDHHC1Q8WTX9 485 aa9.56□□□□□ -0.88
CHD9-206ENST00000562791 DNAAF2Q9NVR5 837 aaKnown RBP9.56□□□□□ -0.88
CHD9-206ENST00000562791 SCHIP1Q9P0W5 487 aaPredicted RBP9.56□□□□□ -0.88
CHD9-206ENST00000562791 MKRN1Q9UHC7 482 aaKnown RBP9.56□□□□□ -0.88
CHD9-206ENST00000562791 PARP3Q9Y6F1 533 aa9.56□□□□□ -0.88
CHD9-206ENST00000562791 BACH1O14867 736 aa9.55□□□□□ -0.88
CHD9-206ENST00000562791 FOXK2Q01167 660 aa9.55□□□□□ -0.88
CHD9-206ENST00000562791 LBRQ14739 615 aaKnown RBP9.55□□□□□ -0.88
CHD9-206ENST00000562791 TBCELQ5QJ74 424 aa9.55□□□□□ -0.88
CHD9-206ENST00000562791 CCDC102BQ68D86 513 aa9.55□□□□□ -0.88
CHD9-206ENST00000562791 TRIM50Q86XT4 487 aa9.55□□□□□ -0.88
CHD9-206ENST00000562791 OGFOD1Q8N543 542 aa9.55□□□□□ -0.88
CHD9-206ENST00000562791 ACDQ96AP0 544 aa9.55□□□□□ -0.88
CHD9-206ENST00000562791 AIDAQ96BJ3 306 aa9.55□□□□□ -0.88
CHD9-206ENST00000562791 CABP1Q9NZU7 370 aa9.55□□□□□ -0.88
CHD9-206ENST00000562791 TFIP11Q9UBB9 837 aaKnown RBP9.55□□□□□ -0.88
CHD9-206ENST00000562791 MAFBQ9Y5Q3 323 aaPredicted RBP9.55□□□□□ -0.88
CHD9-206ENST00000562791 GSK3AP49840 483 aa9.54□□□□□ -0.88
CHD9-206ENST00000562791 EFHC2Q5JST6 749 aa9.54□□□□□ -0.88
CHD9-206ENST00000562791 TNS4Q8IZW8 715 aa9.54□□□□□ -0.88
CHD9-206ENST00000562791 ABHD17AQ96GS6 310 aa9.54□□□□□ -0.88
CHD9-206ENST00000562791 NDFIP2Q9NV92 336 aa9.54□□□□□ -0.88
CHD9-206ENST00000562791 PALM3A6NDB9 673 aaPredicted RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms