RNA–Protein interactions for RNA: ENST00000562325.5

CDH11-203, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-203ENST00000562325 ITPK1Q13572 414 aa26.72■■□□□ 1.87
CDH11-203ENST00000562325 KDRP35968 1356 aa26.71■■□□□ 1.87
CDH11-203ENST00000562325 EIF4A2Q14240 407 aaKnown RBP26.71■■□□□ 1.87
CDH11-203ENST00000562325 ATG3Q9NT62 314 aa26.71■■□□□ 1.87
CDH11-203ENST00000562325 ADRA2BP18089 450 aa26.7■■□□□ 1.86
CDH11-203ENST00000562325 RC3H1Q5TC82 1133 aaKnown RBP26.69■■□□□ 1.86
CDH11-203ENST00000562325 DCAF5Q96JK2 942 aa26.69■■□□□ 1.86
CDH11-203ENST00000562325 CICQ96RK0 1608 aaPredicted RBP26.68■■□□□ 1.86
CDH11-203ENST00000562325 NLGN1Q8N2Q7 840 aa26.67■■□□□ 1.86
CDH11-203ENST00000562325 RTCBQ9Y3I0 505 aaKnown RBP26.67■■□□□ 1.86
CDH11-203ENST00000562325 TGFB2P61812 414 aa26.66■■□□□ 1.86
CDH11-203ENST00000562325 AMOTQ4VCS5 1084 aa26.66■■□□□ 1.86
CDH11-203ENST00000562325 MMP10P09238 476 aa26.65■■□□□ 1.86
CDH11-203ENST00000562325 TRAPPC3LQ5T215 181 aa26.65■■□□□ 1.86
CDH11-203ENST00000562325 CNTNAP4Q9C0A0 1308 aa26.65■■□□□ 1.86
CDH11-203ENST00000562325 PLEKHO1Q53GL0 409 aaPredicted RBP26.64■■□□□ 1.86
CDH11-203ENST00000562325 SMIM5Q71RC9 77 aa26.64■■□□□ 1.86
CDH11-203ENST00000562325 KIF13BQ9NQT8 1826 aa26.64■■□□□ 1.85
CDH11-203ENST00000562325 HSPA6P17066 643 aa26.62■■□□□ 1.85
CDH11-203ENST00000562325 PXDNLA1KZ92 1463 aa26.62■■□□□ 1.85
CDH11-203ENST00000562325 C10orf71Q711Q0 1435 aa26.6■■□□□ 1.85
CDH11-203ENST00000562325 RPS6KA4O75676 772 aa26.59■■□□□ 1.85
CDH11-203ENST00000562325 TNNT2P45379 298 aaPredicted RBP26.59■■□□□ 1.85
CDH11-203ENST00000562325 SLC4A9Q96Q91 983 aa26.59■■□□□ 1.85
CDH11-203ENST00000562325 EIF4G2P78344 907 aaKnown RBP eCLIP26.58■■□□□ 1.85
CDH11-203ENST00000562325 COL5A3P25940 1745 aaPredicted RBP26.57■■□□□ 1.84
CDH11-203ENST00000562325 ARHGEF1Q92888 912 aaKnown RBP26.57■■□□□ 1.84
CDH11-203ENST00000562325 RBM42Q9BTD8 480 aaKnown RBP26.57■■□□□ 1.84
CDH11-203ENST00000562325 CCDC87Q9NVE4 849 aa26.57■■□□□ 1.84
CDH11-203ENST00000562325 KDM6AO15550 1401 aaPredicted RBP26.56■■□□□ 1.84
CDH11-203ENST00000562325 RFC4P35249 363 aa26.56■■□□□ 1.84
CDH11-203ENST00000562325 CABP4P57796 275 aa26.56■■□□□ 1.84
CDH11-203ENST00000562325 ZNF530Q6P9A1 599 aaPredicted RBP26.56■■□□□ 1.84
CDH11-203ENST00000562325 GYS1P13807 737 aa26.55■■□□□ 1.84
CDH11-203ENST00000562325 IFFO2Q5TF58 517 aa26.55■■□□□ 1.84
CDH11-203ENST00000562325 ZNF526Q8TF50 670 aaPredicted RBP26.55■■□□□ 1.84
CDH11-203ENST00000562325 PANK3Q9H999 370 aa26.55■■□□□ 1.84
CDH11-203ENST00000562325 KIAA1551Q9HCM1 1747 aa26.54■■□□□ 1.84
CDH11-203ENST00000562325 KIF3CO14782 793 aa26.54■■□□□ 1.84
CDH11-203ENST00000562325 C1orf141Q5JVX7 400 aa26.54■■□□□ 1.84
CDH11-203ENST00000562325 MTHFSP49914 203 aa26.53■■□□□ 1.84
CDH11-203ENST00000562325 POLR3GLQ9BT43 218 aa26.53■■□□□ 1.84
CDH11-203ENST00000562325 C4AP0C0L4 1744 aa26.53■■□□□ 1.84
CDH11-203ENST00000562325 WWC3Q9ULE0 1092 aa26.52■■□□□ 1.84
CDH11-203ENST00000562325 PARP3Q9Y6F1 533 aa26.52■■□□□ 1.84
CDH11-203ENST00000562325 BCS1LQ9Y276 419 aa26.5■■□□□ 1.83
CDH11-203ENST00000562325 A0A0G2JLW4 131 aa26.49■■□□□ 1.83
CDH11-203ENST00000562325 MORC1Q86VD1 984 aa26.49■■□□□ 1.83
CDH11-203ENST00000562325 HSPA5P11021 654 aaKnown RBP26.47■■□□□ 1.83
CDH11-203ENST00000562325 CRKLP46109 303 aaKnown RBP26.47■■□□□ 1.83
CDH11-203ENST00000562325 TOMM70O94826 608 aa26.46■■□□□ 1.83
CDH11-203ENST00000562325 DPEP1P16444 411 aa26.46■■□□□ 1.83
CDH11-203ENST00000562325 NFATC2IPQ8NCF5 419 aa26.46■■□□□ 1.83
CDH11-203ENST00000562325 MYH14Q7Z406 1995 aaKnown RBP26.46■■□□□ 1.83
CDH11-203ENST00000562325 N4BP2Q86UW6 1770 aaPredicted RBP26.46■■□□□ 1.83
CDH11-203ENST00000562325 USP42Q9H9J4 1324 aaKnown RBP26.45■■□□□ 1.83
CDH11-203ENST00000562325 PTCD1O75127 700 aaKnown RBP26.45■■□□□ 1.82
CDH11-203ENST00000562325 SULT6B1Q6IMI4 303 aa26.45■■□□□ 1.82
CDH11-203ENST00000562325 AEBP1Q8IUX7 1158 aa26.45■■□□□ 1.82
CDH11-203ENST00000562325 KNSTRNQ9Y448 316 aa26.45■■□□□ 1.82
CDH11-203ENST00000562325 BRCA1P38398 1863 aaKnown RBP26.45■■□□□ 1.82
CDH11-203ENST00000562325 FCHSD2O94868 740 aa26.44■■□□□ 1.82
CDH11-203ENST00000562325 APLP1P51693 650 aa26.44■■□□□ 1.82
CDH11-203ENST00000562325 ARHGAP27Q6ZUM4 889 aa26.44■■□□□ 1.82
CDH11-203ENST00000562325 PIM2Q9P1W9 311 aa26.44■■□□□ 1.82
CDH11-203ENST00000562325 KCNA3P22001 575 aa26.43■■□□□ 1.82
CDH11-203ENST00000562325 IL13P35225 146 aa26.43■■□□□ 1.82
CDH11-203ENST00000562325 AKAP4Q5JQC9 854 aa26.43■■□□□ 1.82
CDH11-203ENST00000562325 ARFGEF1Q9Y6D6 1849 aa26.4■■□□□ 1.82
CDH11-203ENST00000562325 TJP1Q07157 1748 aa26.39■■□□□ 1.82
CDH11-203ENST00000562325 FKBP8Q14318 412 aa26.39■■□□□ 1.82
CDH11-203ENST00000562325 DALRD3Q5D0E6 543 aaKnown RBP26.39■■□□□ 1.82
CDH11-203ENST00000562325 SCN11AQ9UI33 1791 aa26.38■■□□□ 1.81
CDH11-203ENST00000562325 MRC1P22897 1456 aa26.38■■□□□ 1.81
CDH11-203ENST00000562325 INTS5Q6P9B9 1019 aaKnown RBP26.38■■□□□ 1.81
CDH11-203ENST00000562325 PCGF6Q9BYE7 350 aa26.38■■□□□ 1.81
CDH11-203ENST00000562325 SLC52A2Q9HAB3 445 aa26.38■■□□□ 1.81
CDH11-203ENST00000562325 DDR1Q08345 913 aa26.37■■□□□ 1.81
CDH11-203ENST00000562325 TM4SF1P30408 202 aa26.36■■□□□ 1.81
CDH11-203ENST00000562325 AMER1Q5JTC6 1135 aaPredicted RBP26.36■■□□□ 1.81
CDH11-203ENST00000562325 RBM46Q8TBY0 533 aaKnown RBP26.36■■□□□ 1.81
CDH11-203ENST00000562325 SRP68Q9UHB9 627 aaKnown RBP26.36■■□□□ 1.81
CDH11-203ENST00000562325 POLRMTO00411 1230 aaKnown RBP26.35■■□□□ 1.81
CDH11-203ENST00000562325 ZPR1O75312 459 aa26.35■■□□□ 1.81
CDH11-203ENST00000562325 C9orf131Q5VYM1 1079 aa26.35■■□□□ 1.81
CDH11-203ENST00000562325 ADAMTS7Q9UKP4 1686 aa26.34■■□□□ 1.81
CDH11-203ENST00000562325 VSIG10Q8N0Z9 540 aa26.34■■□□□ 1.81
CDH11-203ENST00000562325 SOS1Q07889 1333 aaPredicted RBP26.34■■□□□ 1.81
CDH11-203ENST00000562325 KDM2BQ8NHM5 1336 aa26.34■■□□□ 1.81
CDH11-203ENST00000562325 ZC3H4Q9UPT8 1303 aaKnown RBP26.34■■□□□ 1.81
CDH11-203ENST00000562325 NMRK2Q9NPI5 230 aa26.32■■□□□ 1.8
CDH11-203ENST00000562325 CYP19A1P11511 503 aaPredicted RBP26.31■■□□□ 1.8
CDH11-203ENST00000562325 FSTL1Q12841 308 aa26.31■■□□□ 1.8
CDH11-203ENST00000562325 RNMTO43148 476 aaKnown RBP26.3■■□□□ 1.8
CDH11-203ENST00000562325 DNAJC10Q8IXB1 793 aa26.3■■□□□ 1.8
CDH11-203ENST00000562325 DNAJC5GQ8N7S2 189 aa26.3■■□□□ 1.8
CDH11-203ENST00000562325 NARFQ9UHQ1 456 aa26.3■■□□□ 1.8
CDH11-203ENST00000562325 C16orf71Q8IYS4 520 aaPredicted RBP26.29■■□□□ 1.8
CDH11-203ENST00000562325 USPL1Q5W0Q7 1092 aa26.28■■□□□ 1.8
CDH11-203ENST00000562325 COL15A1P39059 1388 aa26.28■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms