RNA–Protein interactions for RNA: ENST00000562307.1

CDH13-205, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-205ENST00000562307 COL14A1Q05707 1796 aaKnown RBP12.13□□□□□ -0.47
CDH13-205ENST00000562307 KDM6AO15550 1401 aaPredicted RBP12.12□□□□□ -0.47
CDH13-205ENST00000562307 TCERG1O14776 1098 aaKnown RBP12.12□□□□□ -0.47
CDH13-205ENST00000562307 SLC4A2P04920 1241 aa12.12□□□□□ -0.47
CDH13-205ENST00000562307 IL2RBP14784 551 aa12.12□□□□□ -0.47
CDH13-205ENST00000562307 NKX1-1Q15270 411 aaPredicted RBP12.12□□□□□ -0.47
CDH13-205ENST00000562307 ZCRB1Q8TBF4 217 aaKnown RBP12.12□□□□□ -0.47
CDH13-205ENST00000562307 CHMP4BQ9H444 224 aaKnown RBP12.12□□□□□ -0.47
CDH13-205ENST00000562307 SLC52A2Q9HAB3 445 aa12.12□□□□□ -0.47
CDH13-205ENST00000562307 ZBTB40Q9NUA8 1239 aa12.12□□□□□ -0.47
CDH13-205ENST00000562307 PCDHB15Q9Y5E8 787 aa12.12□□□□□ -0.47
CDH13-205ENST00000562307 KDM3BQ7LBC6 1761 aa12.12□□□□□ -0.47
CDH13-205ENST00000562307 PHLPP1O60346 1717 aa12.11□□□□□ -0.47
CDH13-205ENST00000562307 ZBTB7BO15156 539 aaPredicted RBP12.11□□□□□ -0.47
CDH13-205ENST00000562307 IGHDP01880 384 aa12.11□□□□□ -0.47
CDH13-205ENST00000562307 INTS3Q68E01 1043 aaKnown RBP12.11□□□□□ -0.47
CDH13-205ENST00000562307 ITPRIPQ8IWB1 547 aa12.11□□□□□ -0.47
CDH13-205ENST00000562307 TSHZ2Q9NRE2 1034 aa12.11□□□□□ -0.47
CDH13-205ENST00000562307 BTG4Q9NY30 223 aa12.11□□□□□ -0.47
CDH13-205ENST00000562307 RGS12O14924 1447 aa12.11□□□□□ -0.47
CDH13-205ENST00000562307 SIPA1L3O60292 1781 aaPredicted RBP12.1□□□□□ -0.47
CDH13-205ENST00000562307 MRC1P22897 1456 aa12.1□□□□□ -0.47
CDH13-205ENST00000562307 UBAP1LF5GYI3 381 aa12.1□□□□□ -0.47
CDH13-205ENST00000562307 KCNQ3O43525 872 aa12.1□□□□□ -0.47
CDH13-205ENST00000562307 STK31Q9BXU1 1019 aa12.1□□□□□ -0.47
CDH13-205ENST00000562307 STRN4Q9NRL3 753 aa12.1□□□□□ -0.47
CDH13-205ENST00000562307 PARP4Q9UKK3 1724 aaKnown RBP12.1□□□□□ -0.47
CDH13-205ENST00000562307 PCDH11XQ9BZA7 1347 aa12.1□□□□□ -0.47
CDH13-205ENST00000562307 PCDH11YQ9BZA8 1340 aa12.1□□□□□ -0.47
CDH13-205ENST00000562307 PIP4K2BP78356 416 aa12.09□□□□□ -0.47
CDH13-205ENST00000562307 SCN11AQ9UI33 1791 aa12.09□□□□□ -0.47
CDH13-205ENST00000562307 ERVV-2B6SEH9 535 aa12.08□□□□□ -0.48
CDH13-205ENST00000562307 GIGYF1O75420 1035 aaPredicted RBP12.08□□□□□ -0.48
CDH13-205ENST00000562307 HDAC1Q13547 482 aaPredicted RBP12.08□□□□□ -0.48
CDH13-205ENST00000562307 HDGFL1Q5TGJ6 251 aa12.08□□□□□ -0.48
CDH13-205ENST00000562307 G2E3Q7L622 706 aa12.08□□□□□ -0.48
CDH13-205ENST00000562307 FBXO41Q8TF61 875 aa12.08□□□□□ -0.48
CDH13-205ENST00000562307 RWDD1Q9H446 243 aaPredicted RBP12.08□□□□□ -0.48
CDH13-205ENST00000562307 DISP2A7MBM2 1401 aa12.08□□□□□ -0.48
CDH13-205ENST00000562307 ZNF790Q6PG37 636 aa12.07□□□□□ -0.48
CDH13-205ENST00000562307 NFATC2IPQ8NCF5 419 aa12.07□□□□□ -0.48
CDH13-205ENST00000562307 VIRMAQ69YN4 1812 aaKnown RBP12.07□□□□□ -0.48
CDH13-205ENST00000562307 FLIIQ13045 1269 aa12.06□□□□□ -0.48
CDH13-205ENST00000562307 CERKQ8TCT0 537 aa12.06□□□□□ -0.48
CDH13-205ENST00000562307 CCT4P50991 539 aaKnown RBP12.05□□□□□ -0.48
CDH13-205ENST00000562307 CABP4P57796 275 aa12.05□□□□□ -0.48
CDH13-205ENST00000562307 CDCA7Q9BWT1 371 aaPredicted RBP12.04□□□□□ -0.48
CDH13-205ENST00000562307 DBF4Q9UBU7 674 aaPredicted RBP12.04□□□□□ -0.48
CDH13-205ENST00000562307 THRAP3Q9Y2W1 955 aaKnown RBP12.04□□□□□ -0.48
CDH13-205ENST00000562307 CACNA1FO60840 1977 aa12.04□□□□□ -0.48
CDH13-205ENST00000562307 JCADQ9P266 1359 aa12.04□□□□□ -0.48
CDH13-205ENST00000562307 SHANK3Q9BYB0 1731 aa12.03□□□□□ -0.48
CDH13-205ENST00000562307 SLIT2O94813 1529 aa12.03□□□□□ -0.48
CDH13-205ENST00000562307 ADAMTS2O95450 1211 aa12.03□□□□□ -0.48
CDH13-205ENST00000562307 EIF2S2P20042 333 aaKnown RBP12.03□□□□□ -0.48
CDH13-205ENST00000562307 SLC39A6Q13433 755 aa12.03□□□□□ -0.48
CDH13-205ENST00000562307 SMC5Q8IY18 1101 aa12.03□□□□□ -0.48
CDH13-205ENST00000562307 NECTIN2Q92692 538 aa12.03□□□□□ -0.48
CDH13-205ENST00000562307 SPATA31A1Q5TZJ5 1347 aa12.03□□□□□ -0.48
CDH13-205ENST00000562307 FKBP5Q13451 457 aaPredicted RBP12.02□□□□□ -0.49
CDH13-205ENST00000562307 ZNF496Q96IT1 587 aaPredicted RBP12.02□□□□□ -0.49
CDH13-205ENST00000562307 FMNL2Q96PY5 1086 aa12.02□□□□□ -0.49
CDH13-205ENST00000562307 PHAXQ9H814 394 aaKnown RBP12.02□□□□□ -0.49
CDH13-205ENST00000562307 CHPF2Q9P2E5 772 aa12.02□□□□□ -0.49
CDH13-205ENST00000562307 PLCH1Q4KWH8 1693 aa12.02□□□□□ -0.49
CDH13-205ENST00000562307 NRAPQ86VF7 1730 aa12.02□□□□□ -0.49
CDH13-205ENST00000562307 PXDNLA1KZ92 1463 aa12.02□□□□□ -0.49
CDH13-205ENST00000562307 SNRPA1P09661 255 aaKnown RBP12.01□□□□□ -0.49
CDH13-205ENST00000562307 TTC5Q8N0Z6 440 aa12.01□□□□□ -0.49
CDH13-205ENST00000562307 DDX54Q8TDD1 881 aaKnown RBP12.01□□□□□ -0.49
CDH13-205ENST00000562307 DDX21Q9NR30 783 aaKnown RBP eCLIP12.01□□□□□ -0.49
CDH13-205ENST00000562307 HYPKQ9NX55 129 aa12.01□□□□□ -0.49
CDH13-205ENST00000562307 USP35Q9P2H5 1018 aa12.01□□□□□ -0.49
CDH13-205ENST00000562307 SPATA31A5Q5VU36 1347 aa12.01□□□□□ -0.49
CDH13-205ENST00000562307 SPATA31A7Q8IWB4 1347 aa12.01□□□□□ -0.49
CDH13-205ENST00000562307 PRAMEF22A3QJZ6 481 aa12□□□□□ -0.49
CDH13-205ENST00000562307 NUTM2BA6NNL0 878 aaPredicted RBP12□□□□□ -0.49
CDH13-205ENST00000562307 NUTM2EB1AL46 878 aaPredicted RBP12□□□□□ -0.49
CDH13-205ENST00000562307 F6X3S4 739 aa12□□□□□ -0.49
CDH13-205ENST00000562307 EXOC5O00471 708 aa12□□□□□ -0.49
CDH13-205ENST00000562307 PDIA6Q15084 440 aa12□□□□□ -0.49
CDH13-205ENST00000562307 BARGINQ6ZT62 677 aa12□□□□□ -0.49
CDH13-205ENST00000562307 NUTM2AQ8IVF1 878 aaPredicted RBP12□□□□□ -0.49
CDH13-205ENST00000562307 SIRT2Q8IXJ6 389 aa12□□□□□ -0.49
CDH13-205ENST00000562307 RPAP2Q8IXW5 612 aaPredicted RBP12□□□□□ -0.49
CDH13-205ENST00000562307 SPATA31A6Q5VVP1 1343 aa12□□□□□ -0.49
CDH13-205ENST00000562307 NWD2Q9ULI1 1742 aa12□□□□□ -0.49
CDH13-205ENST00000562307 PDZRN3Q9UPQ7 1066 aa11.99□□□□□ -0.49
CDH13-205ENST00000562307 TNS2Q63HR2 1409 aa11.99□□□□□ -0.49
CDH13-205ENST00000562307 LRP6O75581 1613 aa11.98□□□□□ -0.49
CDH13-205ENST00000562307 GLI3P10071 1580 aa11.98□□□□□ -0.49
CDH13-205ENST00000562307 IBTKQ9P2D0 1353 aaPredicted RBP11.98□□□□□ -0.49
CDH13-205ENST00000562307 PROSER3Q2NL68 480 aa11.98□□□□□ -0.49
CDH13-205ENST00000562307 SLC4A10Q6U841 1118 aa11.98□□□□□ -0.49
CDH13-205ENST00000562307 SKAP1Q86WV1 359 aa11.98□□□□□ -0.49
CDH13-205ENST00000562307 UNC5CLQ8IV45 518 aa11.98□□□□□ -0.49
CDH13-205ENST00000562307 FNBP4Q8N3X1 1017 aaPredicted RBP11.98□□□□□ -0.49
CDH13-205ENST00000562307 ANKRD44Q8N8A2 993 aa11.98□□□□□ -0.49
CDH13-205ENST00000562307 DNAAF4Q8WXU2 420 aa11.98□□□□□ -0.49
CDH13-205ENST00000562307 GCC1Q96CN9 775 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms