RNA–Protein interactions for RNA: ENST00000561945.1

SPG7-205, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 411 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-205ENST00000561945 SMIM5Q71RC9 77 aa20.01■□□□□ 0.79
SPG7-205ENST00000561945 C1QTNF8P60827 252 aa20■□□□□ 0.79
SPG7-205ENST00000561945 TNNT2P45379 298 aaPredicted RBP19.99■□□□□ 0.79
SPG7-205ENST00000561945 PELP1Q8IZL8 1130 aaKnown RBP19.99■□□□□ 0.79
SPG7-205ENST00000561945 DCAF5Q96JK2 942 aa19.99■□□□□ 0.79
SPG7-205ENST00000561945 KDM6AO15550 1401 aaPredicted RBP19.99■□□□□ 0.79
SPG7-205ENST00000561945 HSP90AB1P08238 724 aaKnown RBP19.98■□□□□ 0.79
SPG7-205ENST00000561945 ATP6V1AP38606 617 aa19.98■□□□□ 0.79
SPG7-205ENST00000561945 AMOTQ4VCS5 1084 aa19.98■□□□□ 0.79
SPG7-205ENST00000561945 POLR3GLQ9BT43 218 aa19.98■□□□□ 0.79
SPG7-205ENST00000561945 KIAA1551Q9HCM1 1747 aa19.98■□□□□ 0.79
SPG7-205ENST00000561945 PHF14O94880 888 aa19.97■□□□□ 0.79
SPG7-205ENST00000561945 SLC4A9Q96Q91 983 aa19.97■□□□□ 0.79
SPG7-205ENST00000561945 PLEKHO1Q53GL0 409 aaPredicted RBP19.96■□□□□ 0.79
SPG7-205ENST00000561945 ADCY9O60503 1353 aa19.95■□□□□ 0.79
SPG7-205ENST00000561945 GNPATO15228 680 aa19.95■□□□□ 0.78
SPG7-205ENST00000561945 RC3H1Q5TC82 1133 aaKnown RBP19.95■□□□□ 0.78
SPG7-205ENST00000561945 SCN11AQ9UI33 1791 aa19.95■□□□□ 0.78
SPG7-205ENST00000561945 C4AP0C0L4 1744 aa19.94■□□□□ 0.78
SPG7-205ENST00000561945 CNTNAP4Q9C0A0 1308 aa19.94■□□□□ 0.78
SPG7-205ENST00000561945 ADRA2BP18089 450 aa19.93■□□□□ 0.78
SPG7-205ENST00000561945 MORC1Q86VD1 984 aa19.93■□□□□ 0.78
SPG7-205ENST00000561945 MYH14Q7Z406 1995 aaKnown RBP19.93■□□□□ 0.78
SPG7-205ENST00000561945 GIGYF1O75420 1035 aaPredicted RBP19.92■□□□□ 0.78
SPG7-205ENST00000561945 IL13P35225 146 aa19.92■□□□□ 0.78
SPG7-205ENST00000561945 TJP1Q07157 1748 aa19.92■□□□□ 0.78
SPG7-205ENST00000561945 AMER1Q5JTC6 1135 aaPredicted RBP19.91■□□□□ 0.78
SPG7-205ENST00000561945 ZNF530Q6P9A1 599 aaPredicted RBP19.91■□□□□ 0.78
SPG7-205ENST00000561945 AEBP1Q8IUX7 1158 aa19.91■□□□□ 0.78
SPG7-205ENST00000561945 ADAMTS7Q9UKP4 1686 aa19.91■□□□□ 0.78
SPG7-205ENST00000561945 RTCBQ9Y3I0 505 aaKnown RBP19.9■□□□□ 0.78
SPG7-205ENST00000561945 KNSTRNQ9Y448 316 aa19.9■□□□□ 0.78
SPG7-205ENST00000561945 ATP10DQ9P241 1426 aa19.9■□□□□ 0.78
SPG7-205ENST00000561945 PXDNLA1KZ92 1463 aa19.89■□□□□ 0.77
SPG7-205ENST00000561945 RPS6KA4O75676 772 aa19.89■□□□□ 0.77
SPG7-205ENST00000561945 BRCA1P38398 1863 aaKnown RBP19.89■□□□□ 0.77
SPG7-205ENST00000561945 TRAPPC3LQ5T215 181 aa19.89■□□□□ 0.77
SPG7-205ENST00000561945 NLGN1Q8N2Q7 840 aa19.89■□□□□ 0.77
SPG7-205ENST00000561945 VIRMAQ69YN4 1812 aaKnown RBP19.88■□□□□ 0.77
SPG7-205ENST00000561945 MRC1P22897 1456 aa19.88■□□□□ 0.77
SPG7-205ENST00000561945 C10orf71Q711Q0 1435 aa19.88■□□□□ 0.77
SPG7-205ENST00000561945 SENP3-EIF4A1A0A087X0R7 540 aa19.88■□□□□ 0.77
SPG7-205ENST00000561945 MTHFSP49914 203 aa19.88■□□□□ 0.77
SPG7-205ENST00000561945 CABP4P57796 275 aa19.88■□□□□ 0.77
SPG7-205ENST00000561945 CCER1Q8TC90 406 aaPredicted RBP19.88■□□□□ 0.77
SPG7-205ENST00000561945 MMP10P09238 476 aa19.87■□□□□ 0.77
SPG7-205ENST00000561945 SULT6B1Q6IMI4 303 aa19.87■□□□□ 0.77
SPG7-205ENST00000561945 ARHGEF1Q92888 912 aaKnown RBP19.87■□□□□ 0.77
SPG7-205ENST00000561945 RBM42Q9BTD8 480 aaKnown RBP19.87■□□□□ 0.77
SPG7-205ENST00000561945 N4BP2Q86UW6 1770 aaPredicted RBP19.87■□□□□ 0.77
SPG7-205ENST00000561945 KIF7Q2M1P5 1343 aa19.86■□□□□ 0.77
SPG7-205ENST00000561945 PER1O15534 1290 aaPredicted RBP19.86■□□□□ 0.77
SPG7-205ENST00000561945 GYS1P13807 737 aa19.86■□□□□ 0.77
SPG7-205ENST00000561945 TGFB2P61812 414 aa19.86■□□□□ 0.77
SPG7-205ENST00000561945 C1orf141Q5JVX7 400 aa19.86■□□□□ 0.77
SPG7-205ENST00000561945 NFATC2IPQ8NCF5 419 aa19.85■□□□□ 0.77
SPG7-205ENST00000561945 WWC3Q9ULE0 1092 aa19.85■□□□□ 0.77
SPG7-205ENST00000561945 AKAP4Q5JQC9 854 aa19.83■□□□□ 0.77
SPG7-205ENST00000561945 ARFGEF1Q9Y6D6 1849 aa19.82■□□□□ 0.76
SPG7-205ENST00000561945 UBR2Q8IWV8 1755 aa19.81■□□□□ 0.76
SPG7-205ENST00000561945 RFC4P35249 363 aa19.81■□□□□ 0.76
SPG7-205ENST00000561945 NPC1L1Q9UHC9 1359 aa19.81■□□□□ 0.76
SPG7-205ENST00000561945 CRKLP46109 303 aaKnown RBP19.8■□□□□ 0.76
SPG7-205ENST00000561945 SLC52A2Q9HAB3 445 aa19.8■□□□□ 0.76
SPG7-205ENST00000561945 GPBP1L1Q9HC44 474 aaPredicted RBP19.8■□□□□ 0.76
SPG7-205ENST00000561945 KCPQ6ZWJ8 1503 aa19.8■□□□□ 0.76
SPG7-205ENST00000561945 USP42Q9H9J4 1324 aaKnown RBP19.79■□□□□ 0.76
SPG7-205ENST00000561945 PTCD1O75127 700 aaKnown RBP19.79■□□□□ 0.76
SPG7-205ENST00000561945 CCDC87Q9NVE4 849 aa19.79■□□□□ 0.76
SPG7-205ENST00000561945 COL3A1P02461 1466 aaPredicted RBP19.79■□□□□ 0.76
SPG7-205ENST00000561945 INTS5Q6P9B9 1019 aaKnown RBP19.78■□□□□ 0.76
SPG7-205ENST00000561945 PARP3Q9Y6F1 533 aa19.77■□□□□ 0.76
SPG7-205ENST00000561945 NRXN2Q9P2S2 1712 aa19.76■□□□□ 0.75
SPG7-205ENST00000561945 A0A0G2JLW4 131 aa19.76■□□□□ 0.75
SPG7-205ENST00000561945 KCNA3P22001 575 aa19.76■□□□□ 0.75
SPG7-205ENST00000561945 LGR6Q9HBX8 967 aa19.76■□□□□ 0.75
SPG7-205ENST00000561945 RNMTO43148 476 aaKnown RBP19.75■□□□□ 0.75
SPG7-205ENST00000561945 SIPA1L3O60292 1781 aaPredicted RBP19.75■□□□□ 0.75
SPG7-205ENST00000561945 DIAPH1O60610 1272 aaKnown RBP19.74■□□□□ 0.75
SPG7-205ENST00000561945 DPEP1P16444 411 aa19.74■□□□□ 0.75
SPG7-205ENST00000561945 TM4SF1P30408 202 aa19.74■□□□□ 0.75
SPG7-205ENST00000561945 FKBP8Q14318 412 aa19.74■□□□□ 0.75
SPG7-205ENST00000561945 MTHFSDQ2M296 383 aaKnown RBP19.74■□□□□ 0.75
SPG7-205ENST00000561945 VSIG10Q8N0Z9 540 aa19.74■□□□□ 0.75
SPG7-205ENST00000561945 SOS1Q07889 1333 aaPredicted RBP19.74■□□□□ 0.75
SPG7-205ENST00000561945 CYP19A1P11511 503 aaPredicted RBP19.73■□□□□ 0.75
SPG7-205ENST00000561945 DDR1Q08345 913 aa19.73■□□□□ 0.75
SPG7-205ENST00000561945 SRP68Q9UHB9 627 aaKnown RBP19.73■□□□□ 0.75
SPG7-205ENST00000561945 KIF3CO14782 793 aa19.72■□□□□ 0.75
SPG7-205ENST00000561945 HMOX1P09601 288 aa19.72■□□□□ 0.75
SPG7-205ENST00000561945 DNAJC10Q8IXB1 793 aa19.72■□□□□ 0.75
SPG7-205ENST00000561945 BCS1LQ9Y276 419 aa19.72■□□□□ 0.75
SPG7-205ENST00000561945 AFDNP55196 1824 aaKnown RBP19.72■□□□□ 0.75
SPG7-205ENST00000561945 DLEC1Q9Y238 1755 aa19.71■□□□□ 0.75
SPG7-205ENST00000561945 POLRMTO00411 1230 aaKnown RBP19.71■□□□□ 0.75
SPG7-205ENST00000561945 ZNF526Q8TF50 670 aaPredicted RBP19.71■□□□□ 0.75
SPG7-205ENST00000561945 HSPA6P17066 643 aa19.69■□□□□ 0.74
SPG7-205ENST00000561945 CC2D1BQ5T0F9 858 aaKnown RBP19.69■□□□□ 0.74
SPG7-205ENST00000561945 PIM2Q9P1W9 311 aa19.69■□□□□ 0.74
SPG7-205ENST00000561945 FCHSD2O94868 740 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms