RNA–Protein interactions for RNA: ENST00000561751.1

CDH1-203, Transcript of cadherin 1, humanhuman

TSL 4

Gene CDH1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-203ENST00000561751 MLLT3P42568 568 aaPredicted RBP8.92□□□□□ -0.98
CDH1-203ENST00000561751 PPP4CP60510 307 aa8.92□□□□□ -0.98
CDH1-203ENST00000561751 NUCB2P80303 420 aa8.92□□□□□ -0.98
CDH1-203ENST00000561751 KCNV2Q8TDN2 545 aa8.92□□□□□ -0.98
CDH1-203ENST00000561751 PIBF1Q8WXW3 757 aa8.92□□□□□ -0.98
CDH1-203ENST00000561751 RBM27Q9P2N5 1060 aaKnown RBP8.92□□□□□ -0.98
CDH1-203ENST00000561751 PLCH2O75038 1416 aa8.91□□□□□ -0.98
CDH1-203ENST00000561751 E9PSI1 815 aa8.91□□□□□ -0.98
CDH1-203ENST00000561751 IGHDP01880 384 aa8.91□□□□□ -0.98
CDH1-203ENST00000561751 PADI6Q6TGC4 694 aa8.91□□□□□ -0.98
CDH1-203ENST00000561751 ARID3AQ99856 593 aa8.91□□□□□ -0.98
CDH1-203ENST00000561751 STRCQ7RTU9 1775 aa8.91□□□□□ -0.98
CDH1-203ENST00000561751 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.9□□□□□ -0.98
CDH1-203ENST00000561751 RAD50Q92878 1312 aa8.9□□□□□ -0.98
CDH1-203ENST00000561751 CTIFO43310 598 aaKnown RBP8.9□□□□□ -0.98
CDH1-203ENST00000561751 XPCQ01831 940 aaPredicted RBP8.9□□□□□ -0.98
CDH1-203ENST00000561751 TJAP1Q5JTD0 557 aa8.9□□□□□ -0.98
CDH1-203ENST00000561751 SKAP1Q86WV1 359 aa8.9□□□□□ -0.98
CDH1-203ENST00000561751 FAM184AQ8NB25 1140 aa8.9□□□□□ -0.98
CDH1-203ENST00000561751 IRX2Q9BZI1 471 aaPredicted RBP8.9□□□□□ -0.98
CDH1-203ENST00000561751 PRDM10Q9NQV6 1147 aa8.9□□□□□ -0.98
CDH1-203ENST00000561751 LAMC1P11047 1609 aa8.9□□□□□ -0.99
CDH1-203ENST00000561751 MFAP1P55081 439 aaKnown RBP8.89□□□□□ -0.99
CDH1-203ENST00000561751 ARHGEF1Q92888 912 aaKnown RBP8.89□□□□□ -0.99
CDH1-203ENST00000561751 ZNF622Q969S3 477 aaKnown RBP eCLIP8.89□□□□□ -0.99
CDH1-203ENST00000561751 CWC22Q9HCG8 908 aaKnown RBP8.89□□□□□ -0.99
CDH1-203ENST00000561751 MORC2Q9Y6X9 1032 aaPredicted RBP8.89□□□□□ -0.99
CDH1-203ENST00000561751 PLEKHH1Q9ULM0 1364 aa8.88□□□□□ -0.99
CDH1-203ENST00000561751 CBX1P83916 185 aa8.88□□□□□ -0.99
CDH1-203ENST00000561751 FKBP5Q13451 457 aaPredicted RBP8.88□□□□□ -0.99
CDH1-203ENST00000561751 LRSAM1Q6UWE0 723 aa8.88□□□□□ -0.99
CDH1-203ENST00000561751 CFDP1Q9UEE9 299 aaPredicted RBP8.88□□□□□ -0.99
CDH1-203ENST00000561751 ZNF777Q9ULD5 760 aaPredicted RBP8.88□□□□□ -0.99
CDH1-203ENST00000561751 DDX49Q9Y6V7 483 aaKnown RBP8.88□□□□□ -0.99
CDH1-203ENST00000561751 C9orf84Q5VXU9 1444 aa8.88□□□□□ -0.99
CDH1-203ENST00000561751 MBD3O95983 291 aa8.87□□□□□ -0.99
CDH1-203ENST00000561751 SLFN14P0C7P3 912 aa8.87□□□□□ -0.99
CDH1-203ENST00000561751 CHAF1AQ13111 956 aaPredicted RBP8.87□□□□□ -0.99
CDH1-203ENST00000561751 ATP2B3Q16720 1220 aa8.87□□□□□ -0.99
CDH1-203ENST00000561751 CDCA8Q53HL2 280 aa8.87□□□□□ -0.99
CDH1-203ENST00000561751 ZNF771Q7L3S4 317 aaPredicted RBP8.87□□□□□ -0.99
CDH1-203ENST00000561751 LRRIQ1Q96JM4 1722 aa8.87□□□□□ -0.99
CDH1-203ENST00000561751 IQSEC2Q5JU85 1478 aa8.87□□□□□ -0.99
CDH1-203ENST00000561751 PTPRTO14522 1441 aa8.87□□□□□ -0.99
CDH1-203ENST00000561751 PIK3C2GO75747 1445 aa8.87□□□□□ -0.99
CDH1-203ENST00000561751 LTBP4Q8N2S1 1624 aa8.87□□□□□ -0.99
CDH1-203ENST00000561751 REREQ9P2R6 1566 aa8.86□□□□□ -0.99
CDH1-203ENST00000561751 ATP10AO60312 1499 aa8.86□□□□□ -0.99
CDH1-203ENST00000561751 SCAF11Q99590 1463 aaKnown RBP8.86□□□□□ -0.99
CDH1-203ENST00000561751 BAG4O95429 457 aaKnown RBP8.86□□□□□ -0.99
CDH1-203ENST00000561751 MLECQ14165 292 aa8.86□□□□□ -0.99
CDH1-203ENST00000561751 NOLC1Q14978 699 aaKnown RBP eCLIP8.86□□□□□ -0.99
CDH1-203ENST00000561751 ZSCAN23Q3MJ62 389 aa8.86□□□□□ -0.99
CDH1-203ENST00000561751 AFAP1Q8N556 730 aa8.86□□□□□ -0.99
CDH1-203ENST00000561751 MTRQ99707 1265 aa8.86□□□□□ -0.99
CDH1-203ENST00000561751 CGNQ9P2M7 1197 aaKnown RBP8.86□□□□□ -0.99
CDH1-203ENST00000561751 KANK1Q14678 1352 aa8.86□□□□□ -0.99
CDH1-203ENST00000561751 GPRASP1Q5JY77 1395 aa8.86□□□□□ -0.99
CDH1-203ENST00000561751 CT47B1P0C2W7 299 aaPredicted RBP8.85□□□□□ -0.99
CDH1-203ENST00000561751 KCNJ4P48050 445 aa8.85□□□□□ -0.99
CDH1-203ENST00000561751 APLP1P51693 650 aa8.85□□□□□ -0.99
CDH1-203ENST00000561751 CEP120Q8N960 986 aa8.85□□□□□ -0.99
CDH1-203ENST00000561751 SECISBP2LQ93073 1101 aaKnown RBP8.85□□□□□ -0.99
CDH1-203ENST00000561751 EYA1Q99502 592 aa8.85□□□□□ -0.99
CDH1-203ENST00000561751 RBSNQ9H1K0 784 aa8.85□□□□□ -0.99
CDH1-203ENST00000561751 PANK3Q9H999 370 aa8.85□□□□□ -0.99
CDH1-203ENST00000561751 FAM53CQ9NYF3 392 aa8.85□□□□□ -0.99
CDH1-203ENST00000561751 DDX41Q9UJV9 622 aaKnown RBP8.85□□□□□ -0.99
CDH1-203ENST00000561751 PDZRN3Q9UPQ7 1066 aa8.85□□□□□ -0.99
CDH1-203ENST00000561751 GPATCH8Q9UKJ3 1502 aaKnown RBP8.85□□□□□ -0.99
CDH1-203ENST00000561751 K7ELQ4 463 aaPredicted RBP8.84□□□□□ -0.99
CDH1-203ENST00000561751 RNF40O75150 1001 aa8.84□□□□□ -0.99
CDH1-203ENST00000561751 CYP2E1P05181 493 aaPredicted RBP8.84□□□□□ -0.99
CDH1-203ENST00000561751 HNRNPMP52272 730 aaKnown RBP eCLIP8.84□□□□□ -0.99
CDH1-203ENST00000561751 HDAC1Q13547 482 aaPredicted RBP8.84□□□□□ -0.99
CDH1-203ENST00000561751 TERF2Q15554 542 aa8.84□□□□□ -0.99
CDH1-203ENST00000561751 SWT1Q5T5J6 900 aaKnown RBP8.84□□□□□ -0.99
CDH1-203ENST00000561751 SYAP1Q96A49 352 aaPredicted RBP8.84□□□□□ -0.99
CDH1-203ENST00000561751 CARD11Q9BXL7 1154 aa8.84□□□□□ -0.99
CDH1-203ENST00000561751 RRP7BPQ9NSQ0 103 aa8.84□□□□□ -0.99
CDH1-203ENST00000561751 LMBRD1Q9NUN5 540 aa8.84□□□□□ -0.99
CDH1-203ENST00000561751 KDM5DQ9BY66 1539 aa8.84□□□□□ -0.99
CDH1-203ENST00000561751 PZPP20742 1482 aa8.83□□□□□ -1
CDH1-203ENST00000561751 ZNF644Q9H582 1327 aaPredicted RBP8.83□□□□□ -1
CDH1-203ENST00000561751 CEBPAP49715 358 aaPredicted RBP8.83□□□□□ -1
CDH1-203ENST00000561751 WDR43Q15061 677 aaKnown RBP eCLIP8.83□□□□□ -1
CDH1-203ENST00000561751 ZNF516Q92618 1163 aa8.83□□□□□ -1
CDH1-203ENST00000561751 BRMS1Q9HCU9 246 aa8.83□□□□□ -1
CDH1-203ENST00000561751 ADAMTS8Q9UP79 889 aa8.83□□□□□ -1
CDH1-203ENST00000561751 DNMT1P26358 1616 aaKnown RBP8.83□□□□□ -1
CDH1-203ENST00000561751 ARHGAP5Q13017 1502 aa8.82□□□□□ -1
CDH1-203ENST00000561751 PTGDRQ13258 359 aa8.82□□□□□ -1
CDH1-203ENST00000561751 CTNNA3Q9UI47 895 aa8.82□□□□□ -1
CDH1-203ENST00000561751 ATAD2Q6PL18 1390 aa8.82□□□□□ -1
CDH1-203ENST00000561751 DAPK1P53355 1430 aa8.81□□□□□ -1
CDH1-203ENST00000561751 ST20-MTHFSA0A0A6YYL1 179 aa8.81□□□□□ -1
CDH1-203ENST00000561751 SLFNL1Q499Z3 407 aa8.81□□□□□ -1
CDH1-203ENST00000561751 RNF20Q5VTR2 975 aa8.81□□□□□ -1
CDH1-203ENST00000561751 CAVIN1Q6NZI2 390 aaKnown RBP8.81□□□□□ -1
CDH1-203ENST00000561751 KRT222Q8N1A0 295 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms