RNA–Protein interactions for RNA: ENST00000561660.1

FANCA-206, Transcript of FA complementation group A, humanhuman

TSL 5

Gene FANCA, Length 762 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-206ENST00000561660 LGR6Q9HBX8 967 aa24.25■■□□□ 1.47
FANCA-206ENST00000561660 TAF1LQ8IZX4 1826 aa24.25■■□□□ 1.47
FANCA-206ENST00000561660 ATP6V1AP38606 617 aa24.23■■□□□ 1.47
FANCA-206ENST00000561660 C4BP0C0L5 1744 aa24.23■■□□□ 1.47
FANCA-206ENST00000561660 ARXQ96QS3 562 aa24.22■■□□□ 1.47
FANCA-206ENST00000561660 RNMTO43148 476 aaKnown RBP24.21■■□□□ 1.47
FANCA-206ENST00000561660 HMGB2P26583 209 aaKnown RBP24.21■■□□□ 1.47
FANCA-206ENST00000561660 AK7Q96M32 723 aa24.21■■□□□ 1.47
FANCA-206ENST00000561660 CFAP53Q96M91 514 aa24.21■■□□□ 1.47
FANCA-206ENST00000561660 FHDC1Q9C0D6 1143 aaPredicted RBP24.21■■□□□ 1.47
FANCA-206ENST00000561660 MSH5O43196 834 aa24.2■■□□□ 1.46
FANCA-206ENST00000561660 RBM42Q9BTD8 480 aaKnown RBP24.2■■□□□ 1.46
FANCA-206ENST00000561660 SYT17Q9BSW7 474 aa24.19■■□□□ 1.46
FANCA-206ENST00000561660 SLC52A2Q9HAB3 445 aa24.19■■□□□ 1.46
FANCA-206ENST00000561660 UTRNP46939 3433 aa24.18■■□□□ 1.46
FANCA-206ENST00000561660 RSPH6AQ9H0K4 717 aa24.18■■□□□ 1.46
FANCA-206ENST00000561660 COL24A1Q17RW2 1714 aa24.18■■□□□ 1.46
FANCA-206ENST00000561660 MSL1Q68DK7 614 aa24.17■■□□□ 1.46
FANCA-206ENST00000561660 FLAD1Q8NFF5 587 aa24.17■■□□□ 1.46
FANCA-206ENST00000561660 PHACTR3Q96KR7 559 aa24.17■■□□□ 1.46
FANCA-206ENST00000561660 SCN11AQ9UI33 1791 aa24.16■■□□□ 1.46
FANCA-206ENST00000561660 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.16■■□□□ 1.46
FANCA-206ENST00000561660 PTCD1O75127 700 aaKnown RBP24.16■■□□□ 1.46
FANCA-206ENST00000561660 PHF14O94880 888 aa24.16■■□□□ 1.46
FANCA-206ENST00000561660 MRC1P22897 1456 aa24.15■■□□□ 1.46
FANCA-206ENST00000561660 POLD1P28340 1107 aa24.15■■□□□ 1.46
FANCA-206ENST00000561660 PRKAR2BP31323 418 aa24.15■■□□□ 1.46
FANCA-206ENST00000561660 GNPATO15228 680 aa24.14■■□□□ 1.45
FANCA-206ENST00000561660 SSFA2P28290 1259 aa24.14■■□□□ 1.45
FANCA-206ENST00000561660 DDX10Q13206 875 aaKnown RBP24.14■■□□□ 1.45
FANCA-206ENST00000561660 NUDCQ9Y266 331 aa24.14■■□□□ 1.45
FANCA-206ENST00000561660 ADAMTS7Q9UKP4 1686 aa24.14■■□□□ 1.45
FANCA-206ENST00000561660 UBR3Q6ZT12 1888 aa24.13■■□□□ 1.45
FANCA-206ENST00000561660 U2AF1L5P0DN76 240 aaPredicted RBP24.13■■□□□ 1.45
FANCA-206ENST00000561660 U2AF1Q01081 240 aaKnown RBP eCLIP24.13■■□□□ 1.45
FANCA-206ENST00000561660 MAP3K5Q99683 1374 aa24.13■■□□□ 1.45
FANCA-206ENST00000561660 ZNF831Q5JPB2 1677 aa24.12■■□□□ 1.45
FANCA-206ENST00000561660 SLC39A6Q13433 755 aa24.12■■□□□ 1.45
FANCA-206ENST00000561660 IL17REQ8NFR9 667 aa24.12■■□□□ 1.45
FANCA-206ENST00000561660 GAS2L2Q8NHY3 880 aa24.12■■□□□ 1.45
FANCA-206ENST00000561660 RC3H1Q5TC82 1133 aaKnown RBP24.11■■□□□ 1.45
FANCA-206ENST00000561660 GNAT3A8MTJ3 354 aa24.1■■□□□ 1.45
FANCA-206ENST00000561660 CNTNAP4Q9C0A0 1308 aa24.1■■□□□ 1.45
FANCA-206ENST00000561660 FCHSD2O94868 740 aa24.09■■□□□ 1.45
FANCA-206ENST00000561660 GOLGB1Q14789 3259 aaKnown RBP24.08■■□□□ 1.45
FANCA-206ENST00000561660 RTCBQ9Y3I0 505 aaKnown RBP24.07■■□□□ 1.44
FANCA-206ENST00000561660 COL5A3P25940 1745 aaPredicted RBP24.07■■□□□ 1.44
FANCA-206ENST00000561660 RPS6KA4O75676 772 aa24.06■■□□□ 1.44
FANCA-206ENST00000561660 DNAJC10Q8IXB1 793 aa24.06■■□□□ 1.44
FANCA-206ENST00000561660 KLHL34Q8N239 644 aa24.06■■□□□ 1.44
FANCA-206ENST00000561660 KCPQ6ZWJ8 1503 aa24.05■■□□□ 1.44
FANCA-206ENST00000561660 CRKLP46109 303 aaKnown RBP24.05■■□□□ 1.44
FANCA-206ENST00000561660 TRAPPC3LQ5T215 181 aa24.05■■□□□ 1.44
FANCA-206ENST00000561660 NLGN2Q8NFZ4 835 aa24.05■■□□□ 1.44
FANCA-206ENST00000561660 ARHGEF1Q92888 912 aaKnown RBP24.05■■□□□ 1.44
FANCA-206ENST00000561660 MYH14Q7Z406 1995 aaKnown RBP24.05■■□□□ 1.44
FANCA-206ENST00000561660 CEMIPQ8WUJ3 1361 aa24.04■■□□□ 1.44
FANCA-206ENST00000561660 RALBP1Q15311 655 aa24.04■■□□□ 1.44
FANCA-206ENST00000561660 INTS5Q6P9B9 1019 aaKnown RBP24.04■■□□□ 1.44
FANCA-206ENST00000561660 TJP1Q07157 1748 aa24.04■■□□□ 1.44
FANCA-206ENST00000561660 VIRMAQ69YN4 1812 aaKnown RBP24.03■■□□□ 1.44
FANCA-206ENST00000561660 ADRA2BP18089 450 aa24.02■■□□□ 1.44
FANCA-206ENST00000561660 CICQ96RK0 1608 aaPredicted RBP24.02■■□□□ 1.44
FANCA-206ENST00000561660 TEFQ10587 303 aa24.01■■□□□ 1.43
FANCA-206ENST00000561660 DCAF8L1A6NGE4 600 aa24■■□□□ 1.43
FANCA-206ENST00000561660 CYP19A1P11511 503 aaPredicted RBP24■■□□□ 1.43
FANCA-206ENST00000561660 PLEKHF1Q96S99 279 aa24■■□□□ 1.43
FANCA-206ENST00000561660 ZNF790Q6PG37 636 aa23.99■■□□□ 1.43
FANCA-206ENST00000561660 GYS1P13807 737 aa23.98■■□□□ 1.43
FANCA-206ENST00000561660 MCM10Q7L590 875 aa23.98■■□□□ 1.43
FANCA-206ENST00000561660 VSIG10Q8N0Z9 540 aa23.98■■□□□ 1.43
FANCA-206ENST00000561660 ZNF496Q96IT1 587 aaPredicted RBP23.98■■□□□ 1.43
FANCA-206ENST00000561660 KCNQ3O43525 872 aa23.97■■□□□ 1.43
FANCA-206ENST00000561660 RFC4P35249 363 aa23.97■■□□□ 1.43
FANCA-206ENST00000561660 DCTN1Q14203 1278 aa23.97■■□□□ 1.43
FANCA-206ENST00000561660 CCDC87Q9NVE4 849 aa23.97■■□□□ 1.43
FANCA-206ENST00000561660 MMP10P09238 476 aa23.96■■□□□ 1.43
FANCA-206ENST00000561660 ZEB1P37275 1124 aaPredicted RBP23.96■■□□□ 1.43
FANCA-206ENST00000561660 TTC5Q8N0Z6 440 aa23.96■■□□□ 1.43
FANCA-206ENST00000561660 SRP68Q9UHB9 627 aaKnown RBP23.96■■□□□ 1.43
FANCA-206ENST00000561660 CD2APQ9Y5K6 639 aa23.96■■□□□ 1.43
FANCA-206ENST00000561660 SIPA1L3O60292 1781 aaPredicted RBP23.96■■□□□ 1.43
FANCA-206ENST00000561660 UBR2Q8IWV8 1755 aa23.95■■□□□ 1.42
FANCA-206ENST00000561660 SOS1Q07889 1333 aaPredicted RBP23.94■■□□□ 1.42
FANCA-206ENST00000561660 HTATSF1O43719 755 aaKnown RBP23.94■■□□□ 1.42
FANCA-206ENST00000561660 NLGN1Q8N2Q7 840 aa23.94■■□□□ 1.42
FANCA-206ENST00000561660 ZBTB1Q9Y2K1 713 aa23.94■■□□□ 1.42
FANCA-206ENST00000561660 MYBBP1AQ9BQG0 1328 aaKnown RBP23.93■■□□□ 1.42
FANCA-206ENST00000561660 BTBD11A6QL63 1104 aa23.93■■□□□ 1.42
FANCA-206ENST00000561660 RTF1Q92541 710 aaKnown RBP23.93■■□□□ 1.42
FANCA-206ENST00000561660 HEG1Q9ULI3 1381 aa23.92■■□□□ 1.42
FANCA-206ENST00000561660 USP42Q9H9J4 1324 aaKnown RBP23.92■■□□□ 1.42
FANCA-206ENST00000561660 YY1P25490 414 aa23.92■■□□□ 1.42
FANCA-206ENST00000561660 GPR162Q16538 588 aa23.92■■□□□ 1.42
FANCA-206ENST00000561660 C4AP0C0L4 1744 aa23.91■■□□□ 1.42
FANCA-206ENST00000561660 FKBP8Q14318 412 aa23.91■■□□□ 1.42
FANCA-206ENST00000561660 YBX3P16989 372 aaKnown RBP eCLIP23.9■■□□□ 1.42
FANCA-206ENST00000561660 FMNL2Q96PY5 1086 aa23.9■■□□□ 1.42
FANCA-206ENST00000561660 NFE2L2Q16236 605 aa23.89■■□□□ 1.41
FANCA-206ENST00000561660 PRKRIP1Q9H875 184 aaPredicted RBP23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 139.6 ms