RNA–Protein interactions for RNA: ENST00000561356.1

TM2D3-214, Transcript of TM2 domain containing 3, humanhuman

TSL 4

Gene TM2D3, Length 565 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D3-214ENST00000561356 C4AP0C0L4 1744 aa11.52□□□□□ -0.57
TM2D3-214ENST00000561356 TMEM88BA6NKF7 163 aa11.51□□□□□ -0.57
TM2D3-214ENST00000561356 PLEKHG3A1L390 1219 aa11.5□□□□□ -0.57
TM2D3-214ENST00000561356 ZNF219Q9P2Y4 722 aaPredicted RBP11.5□□□□□ -0.57
TM2D3-214ENST00000561356 ZBTB22O15209 634 aa11.49□□□□□ -0.57
TM2D3-214ENST00000561356 ITGBL1O95965 494 aaPredicted RBP11.49□□□□□ -0.57
TM2D3-214ENST00000561356 NLRP6P59044 892 aa11.49□□□□□ -0.57
TM2D3-214ENST00000561356 DDX54Q8TDD1 881 aaKnown RBP11.49□□□□□ -0.57
TM2D3-214ENST00000561356 USP47Q96K76 1375 aa11.49□□□□□ -0.57
TM2D3-214ENST00000561356 RANBP2P49792 3224 aaKnown RBP11.48□□□□□ -0.57
TM2D3-214ENST00000561356 NSD3Q9BZ95 1437 aa11.48□□□□□ -0.57
TM2D3-214ENST00000561356 SPTBN5Q9NRC6 3674 aaKnown RBP11.48□□□□□ -0.57
TM2D3-214ENST00000561356 ADAMTSL1Q8N6G6 1762 aa11.47□□□□□ -0.57
TM2D3-214ENST00000561356 DEFB115Q30KQ5 88 aa11.47□□□□□ -0.57
TM2D3-214ENST00000561356 SLC17A8Q8NDX2 589 aa11.47□□□□□ -0.57
TM2D3-214ENST00000561356 SOX12O15370 315 aa11.46□□□□□ -0.57
TM2D3-214ENST00000561356 DALRD3Q5D0E6 543 aaKnown RBP11.46□□□□□ -0.57
TM2D3-214ENST00000561356 AK7Q96M32 723 aa11.46□□□□□ -0.57
TM2D3-214ENST00000561356 PALLDQ8WX93 1383 aa11.45□□□□□ -0.58
TM2D3-214ENST00000561356 MAP2P11137 1827 aaKnown RBP11.45□□□□□ -0.58
TM2D3-214ENST00000561356 CDK19Q9BWU1 502 aa11.45□□□□□ -0.58
TM2D3-214ENST00000561356 NLRP2Q9NX02 1062 aa11.45□□□□□ -0.58
TM2D3-214ENST00000561356 PIM2Q9P1W9 311 aa11.45□□□□□ -0.58
TM2D3-214ENST00000561356 CCDC61Q9Y6R9 512 aa11.45□□□□□ -0.58
TM2D3-214ENST00000561356 LMNB1P20700 586 aa11.44□□□□□ -0.58
TM2D3-214ENST00000561356 SSFA2P28290 1259 aa11.44□□□□□ -0.58
TM2D3-214ENST00000561356 CHRNA5P30532 468 aa11.43□□□□□ -0.58
TM2D3-214ENST00000561356 MPNDQ8N594 471 aa11.42□□□□□ -0.58
TM2D3-214ENST00000561356 LINC00116Q8NCU8 138 aa11.42□□□□□ -0.58
TM2D3-214ENST00000561356 CAPNS2Q96L46 248 aa11.42□□□□□ -0.58
TM2D3-214ENST00000561356 TRIOBPQ9H2D6 2365 aa11.42□□□□□ -0.58
TM2D3-214ENST00000561356 FAM208AQ9UK61 1670 aaKnown RBP11.41□□□□□ -0.58
TM2D3-214ENST00000561356 NFKBIEO00221 500 aa11.41□□□□□ -0.58
TM2D3-214ENST00000561356 AOC2O75106 756 aa11.41□□□□□ -0.58
TM2D3-214ENST00000561356 CYP4F22Q6NT55 531 aa11.41□□□□□ -0.58
TM2D3-214ENST00000561356 NBPF15Q8N660 670 aa11.41□□□□□ -0.58
TM2D3-214ENST00000561356 BEGAINQ9BUH8 593 aa11.41□□□□□ -0.58
TM2D3-214ENST00000561356 CCDC87Q9NVE4 849 aa11.41□□□□□ -0.58
TM2D3-214ENST00000561356 DICER1Q9UPY3 1922 aaKnown RBP11.41□□□□□ -0.58
TM2D3-214ENST00000561356 LAMA3Q16787 3333 aa11.4□□□□□ -0.58
TM2D3-214ENST00000561356 HTTP42858 3142 aa11.4□□□□□ -0.58
TM2D3-214ENST00000561356 CENPFP49454 3210 aa11.4□□□□□ -0.58
TM2D3-214ENST00000561356 ITGAEP38570 1179 aa11.4□□□□□ -0.58
TM2D3-214ENST00000561356 GRM1Q13255 1194 aa11.4□□□□□ -0.58
TM2D3-214ENST00000561356 LDHDQ86WU2 507 aa11.4□□□□□ -0.58
TM2D3-214ENST00000561356 GPR101Q96P66 508 aaPredicted RBP11.4□□□□□ -0.58
TM2D3-214ENST00000561356 LTN1O94822 1766 aa11.4□□□□□ -0.58
TM2D3-214ENST00000561356 ABT1Q9ULW3 272 aaKnown RBP11.39□□□□□ -0.59
TM2D3-214ENST00000561356 DDNO94850 711 aaPredicted RBP11.38□□□□□ -0.59
TM2D3-214ENST00000561356 FMR1Q06787 632 aaKnown RBP eCLIP11.38□□□□□ -0.59
TM2D3-214ENST00000561356 DLEC1Q9Y238 1755 aa11.37□□□□□ -0.59
TM2D3-214ENST00000561356 SCN4AP35499 1836 aa11.37□□□□□ -0.59
TM2D3-214ENST00000561356 GNPATO15228 680 aa11.36□□□□□ -0.59
TM2D3-214ENST00000561356 ANKRD24Q8TF21 1146 aa11.36□□□□□ -0.59
TM2D3-214ENST00000561356 TAF1DQ9H5J8 278 aaPredicted RBP11.36□□□□□ -0.59
TM2D3-214ENST00000561356 ITGB4P16144 1822 aa11.35□□□□□ -0.59
TM2D3-214ENST00000561356 PAXIP1Q6ZW49 1069 aaPredicted RBP11.35□□□□□ -0.59
TM2D3-214ENST00000561356 KCNH5Q8NCM2 988 aa11.35□□□□□ -0.59
TM2D3-214ENST00000561356 RGPD2P0DJD1 1756 aa11.34□□□□□ -0.59
TM2D3-214ENST00000561356 GYS1P13807 737 aa11.34□□□□□ -0.59
TM2D3-214ENST00000561356 ITPK1Q13572 414 aa11.34□□□□□ -0.59
TM2D3-214ENST00000561356 MAP1SQ66K74 1059 aaPredicted RBP11.34□□□□□ -0.59
TM2D3-214ENST00000561356 DPY19L2Q6NUT2 758 aa11.34□□□□□ -0.59
TM2D3-214ENST00000561356 TMF1P82094 1093 aa11.33□□□□□ -0.6
TM2D3-214ENST00000561356 DDR1Q08345 913 aa11.33□□□□□ -0.6
TM2D3-214ENST00000561356 COLQQ9Y215 455 aaPredicted RBP11.33□□□□□ -0.6
TM2D3-214ENST00000561356 MUC3AQ02505 3323 aa11.32□□□□□ -0.6
TM2D3-214ENST00000561356 FER1L6Q2WGJ9 1857 aa11.32□□□□□ -0.6
TM2D3-214ENST00000561356 CA12O43570 354 aa11.32□□□□□ -0.6
TM2D3-214ENST00000561356 PARP3Q9Y6F1 533 aa11.32□□□□□ -0.6
TM2D3-214ENST00000561356 ECE1P42892 770 aa11.31□□□□□ -0.6
TM2D3-214ENST00000561356 MNX1P50219 401 aaPredicted RBP11.31□□□□□ -0.6
TM2D3-214ENST00000561356 EAPPQ56P03 285 aaPredicted RBP11.31□□□□□ -0.6
TM2D3-214ENST00000561356 CNTROBQ8N137 903 aa11.31□□□□□ -0.6
TM2D3-214ENST00000561356 NLGN1Q8N2Q7 840 aa11.31□□□□□ -0.6
TM2D3-214ENST00000561356 ZIC5Q96T25 663 aa11.31□□□□□ -0.6
TM2D3-214ENST00000561356 SCN11AQ9UI33 1791 aa11.31□□□□□ -0.6
TM2D3-214ENST00000561356 SLC4A2P04920 1241 aa11.3□□□□□ -0.6
TM2D3-214ENST00000561356 MAP2K2P36507 400 aa11.3□□□□□ -0.6
TM2D3-214ENST00000561356 NBPF1Q3BBV0 1214 aa11.3□□□□□ -0.6
TM2D3-214ENST00000561356 ERFEQ4G0M1 354 aa11.3□□□□□ -0.6
TM2D3-214ENST00000561356 DDX21Q9NR30 783 aaKnown RBP eCLIP11.3□□□□□ -0.6
TM2D3-214ENST00000561356 HPS5Q9UPZ3 1129 aa11.3□□□□□ -0.6
TM2D3-214ENST00000561356 TTC21BQ7Z4L5 1316 aa11.3□□□□□ -0.6
TM2D3-214ENST00000561356 BRPF1P55201 1214 aaPredicted RBP11.29□□□□□ -0.6
TM2D3-214ENST00000561356 CIAPIN1Q6FI81 312 aa11.29□□□□□ -0.6
TM2D3-214ENST00000561356 MPRIPQ6WCQ1 1025 aa11.29□□□□□ -0.6
TM2D3-214ENST00000561356 ZCRB1Q8TBF4 217 aaKnown RBP11.29□□□□□ -0.6
TM2D3-214ENST00000561356 L3MBTL3Q96JM7 780 aaPredicted RBP11.29□□□□□ -0.6
TM2D3-214ENST00000561356 CABP2Q9NPB3 220 aa11.29□□□□□ -0.6
TM2D3-214ENST00000561356 TRPM7Q96QT4 1865 aa11.29□□□□□ -0.6
TM2D3-214ENST00000561356 CEP290O15078 2479 aa11.28□□□□□ -0.6
TM2D3-214ENST00000561356 CST9Q5W186 159 aa11.28□□□□□ -0.6
TM2D3-214ENST00000561356 COL25A1Q9BXS0 654 aaPredicted RBP11.28□□□□□ -0.6
TM2D3-214ENST00000561356 CABP1Q9NZU7 370 aa11.28□□□□□ -0.6
TM2D3-214ENST00000561356 LOC102724428A0A0B4J2F2 783 aa11.27□□□□□ -0.61
TM2D3-214ENST00000561356 SIK1P57059 783 aa11.27□□□□□ -0.61
TM2D3-214ENST00000561356 ARHGEF1Q92888 912 aaKnown RBP11.27□□□□□ -0.61
TM2D3-214ENST00000561356 TLL2Q9Y6L7 1015 aa11.27□□□□□ -0.61
TM2D3-214ENST00000561356 COL5A3P25940 1745 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms