RNA–Protein interactions for RNA: ENST00000561338.5

ALDH1A3-207, Transcript of aldehyde dehydrogenase 1 family member A3, humanhuman

TSL 4

Gene ALDH1A3, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A3-207ENST00000561338 ERVV-2B6SEH9 535 aa22.53■■□□□ 1.2
ALDH1A3-207ENST00000561338 MTHFSDQ2M296 383 aaKnown RBP22.53■■□□□ 1.2
ALDH1A3-207ENST00000561338 LINC00116Q8NCU8 138 aa22.53■■□□□ 1.2
ALDH1A3-207ENST00000561338 LOC102724428A0A0B4J2F2 783 aa22.52■■□□□ 1.2
ALDH1A3-207ENST00000561338 SIK1P57059 783 aa22.52■■□□□ 1.2
ALDH1A3-207ENST00000561338 SMARCC1Q92922 1105 aaPredicted RBP22.52■■□□□ 1.2
ALDH1A3-207ENST00000561338 MTFR1LQ9H019 292 aa22.52■■□□□ 1.2
ALDH1A3-207ENST00000561338 U2SURPO15042 1029 aaKnown RBP22.51■■□□□ 1.19
ALDH1A3-207ENST00000561338 HSP90AB1P08238 724 aaKnown RBP22.51■■□□□ 1.19
ALDH1A3-207ENST00000561338 C1orf141Q5JVX7 400 aa22.51■■□□□ 1.19
ALDH1A3-207ENST00000561338 SMIM5Q71RC9 77 aa22.51■■□□□ 1.19
ALDH1A3-207ENST00000561338 KIAA1551Q9HCM1 1747 aa22.51■■□□□ 1.19
ALDH1A3-207ENST00000561338 AKAP4Q5JQC9 854 aa22.5■■□□□ 1.19
ALDH1A3-207ENST00000561338 RSPH6AQ9H0K4 717 aa22.5■■□□□ 1.19
ALDH1A3-207ENST00000561338 TFCP2L1Q9NZI6 479 aa22.5■■□□□ 1.19
ALDH1A3-207ENST00000561338 KDM3BQ7LBC6 1761 aa22.5■■□□□ 1.19
ALDH1A3-207ENST00000561338 KIF13BQ9NQT8 1826 aa22.5■■□□□ 1.19
ALDH1A3-207ENST00000561338 COL23A1Q86Y22 540 aaPredicted RBP22.49■■□□□ 1.19
ALDH1A3-207ENST00000561338 LGR6Q9HBX8 967 aa22.49■■□□□ 1.19
ALDH1A3-207ENST00000561338 MAP3K5Q99683 1374 aa22.48■■□□□ 1.19
ALDH1A3-207ENST00000561338 LAMB4A4D0S4 1761 aa22.46■■□□□ 1.19
ALDH1A3-207ENST00000561338 RNMTO43148 476 aaKnown RBP22.46■■□□□ 1.19
ALDH1A3-207ENST00000561338 CABP4P57796 275 aa22.46■■□□□ 1.19
ALDH1A3-207ENST00000561338 NFATC2IPQ8NCF5 419 aa22.46■■□□□ 1.19
ALDH1A3-207ENST00000561338 CHD4Q14839 1912 aa22.45■■□□□ 1.18
ALDH1A3-207ENST00000561338 PRKAR2BP31323 418 aa22.45■■□□□ 1.18
ALDH1A3-207ENST00000561338 DDX10Q13206 875 aaKnown RBP22.45■■□□□ 1.18
ALDH1A3-207ENST00000561338 PHACTR3Q96KR7 559 aa22.45■■□□□ 1.18
ALDH1A3-207ENST00000561338 CFAP53Q96M91 514 aa22.45■■□□□ 1.18
ALDH1A3-207ENST00000561338 SLC52A2Q9HAB3 445 aa22.44■■□□□ 1.18
ALDH1A3-207ENST00000561338 PPP1R1BQ9UD71 204 aaPredicted RBP22.44■■□□□ 1.18
ALDH1A3-207ENST00000561338 ATP6V1AP38606 617 aa22.43■■□□□ 1.18
ALDH1A3-207ENST00000561338 BRCA1P38398 1863 aaKnown RBP22.42■■□□□ 1.18
ALDH1A3-207ENST00000561338 SCN7AQ01118 1682 aa22.42■■□□□ 1.18
ALDH1A3-207ENST00000561338 CEMIPQ8WUJ3 1361 aa22.41■■□□□ 1.18
ALDH1A3-207ENST00000561338 AFDNP55196 1824 aaKnown RBP22.41■■□□□ 1.18
ALDH1A3-207ENST00000561338 BCORQ6W2J9 1755 aa22.41■■□□□ 1.18
ALDH1A3-207ENST00000561338 MSL1Q68DK7 614 aa22.41■■□□□ 1.18
ALDH1A3-207ENST00000561338 SLC16A10Q8TF71 515 aa22.41■■□□□ 1.18
ALDH1A3-207ENST00000561338 AK7Q96M32 723 aa22.41■■□□□ 1.18
ALDH1A3-207ENST00000561338 N4BP2Q86UW6 1770 aaPredicted RBP22.4■■□□□ 1.18
ALDH1A3-207ENST00000561338 PHF14O94880 888 aa22.4■■□□□ 1.18
ALDH1A3-207ENST00000561338 RBM42Q9BTD8 480 aaKnown RBP22.4■■□□□ 1.18
ALDH1A3-207ENST00000561338 FHDC1Q9C0D6 1143 aaPredicted RBP22.4■■□□□ 1.18
ALDH1A3-207ENST00000561338 U2AF1L5P0DN76 240 aaPredicted RBP22.39■■□□□ 1.17
ALDH1A3-207ENST00000561338 U2AF1Q01081 240 aaKnown RBP eCLIP22.39■■□□□ 1.17
ALDH1A3-207ENST00000561338 SLC39A6Q13433 755 aa22.39■■□□□ 1.17
ALDH1A3-207ENST00000561338 CNTNAP4Q9C0A0 1308 aa22.38■■□□□ 1.17
ALDH1A3-207ENST00000561338 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.38■■□□□ 1.17
ALDH1A3-207ENST00000561338 GNPATO15228 680 aa22.38■■□□□ 1.17
ALDH1A3-207ENST00000561338 PTCD1O75127 700 aaKnown RBP22.38■■□□□ 1.17
ALDH1A3-207ENST00000561338 IL17REQ8NFR9 667 aa22.38■■□□□ 1.17
ALDH1A3-207ENST00000561338 GAS2L2Q8NHY3 880 aa22.37■■□□□ 1.17
ALDH1A3-207ENST00000561338 ARXQ96QS3 562 aa22.37■■□□□ 1.17
ALDH1A3-207ENST00000561338 GNAT3A8MTJ3 354 aa22.35■■□□□ 1.17
ALDH1A3-207ENST00000561338 MSH5O43196 834 aa22.35■■□□□ 1.17
ALDH1A3-207ENST00000561338 SSFA2P28290 1259 aa22.35■■□□□ 1.17
ALDH1A3-207ENST00000561338 NUDCQ9Y266 331 aa22.35■■□□□ 1.17
ALDH1A3-207ENST00000561338 SYT17Q9BSW7 474 aa22.34■■□□□ 1.17
ALDH1A3-207ENST00000561338 NRXN2Q9P2S2 1712 aa22.34■■□□□ 1.17
ALDH1A3-207ENST00000561338 GOLGB1Q14789 3259 aaKnown RBP22.33■■□□□ 1.16
ALDH1A3-207ENST00000561338 FCHSD2O94868 740 aa22.32■■□□□ 1.16
ALDH1A3-207ENST00000561338 RALBP1Q15311 655 aa22.32■■□□□ 1.16
ALDH1A3-207ENST00000561338 DNAJC10Q8IXB1 793 aa22.32■■□□□ 1.16
ALDH1A3-207ENST00000561338 PLEKHF1Q96S99 279 aa22.32■■□□□ 1.16
ALDH1A3-207ENST00000561338 MYBBP1AQ9BQG0 1328 aaKnown RBP22.31■■□□□ 1.16
ALDH1A3-207ENST00000561338 CRKLP46109 303 aaKnown RBP22.31■■□□□ 1.16
ALDH1A3-207ENST00000561338 FLAD1Q8NFF5 587 aa22.31■■□□□ 1.16
ALDH1A3-207ENST00000561338 UTRNP46939 3433 aa22.31■■□□□ 1.16
ALDH1A3-207ENST00000561338 DLEC1Q9Y238 1755 aa22.3■■□□□ 1.16
ALDH1A3-207ENST00000561338 RC3H1Q5TC82 1133 aaKnown RBP22.3■■□□□ 1.16
ALDH1A3-207ENST00000561338 POLD1P28340 1107 aa22.29■■□□□ 1.16
ALDH1A3-207ENST00000561338 ZEB1P37275 1124 aaPredicted RBP22.29■■□□□ 1.16
ALDH1A3-207ENST00000561338 INTS5Q6P9B9 1019 aaKnown RBP22.29■■□□□ 1.16
ALDH1A3-207ENST00000561338 NLGN2Q8NFZ4 835 aa22.29■■□□□ 1.16
ALDH1A3-207ENST00000561338 ANKRD31Q8N7Z5 1873 aa22.28■■□□□ 1.16
ALDH1A3-207ENST00000561338 DCTN1Q14203 1278 aa22.28■■□□□ 1.16
ALDH1A3-207ENST00000561338 MCM10Q7L590 875 aa22.28■■□□□ 1.16
ALDH1A3-207ENST00000561338 KCNQ3O43525 872 aa22.27■■□□□ 1.16
ALDH1A3-207ENST00000561338 RPS6KA4O75676 772 aa22.27■■□□□ 1.16
ALDH1A3-207ENST00000561338 HEG1Q9ULI3 1381 aa22.26■■□□□ 1.15
ALDH1A3-207ENST00000561338 CYP19A1P11511 503 aaPredicted RBP22.26■■□□□ 1.15
ALDH1A3-207ENST00000561338 HMGB2P26583 209 aaKnown RBP22.26■■□□□ 1.15
ALDH1A3-207ENST00000561338 ZNF496Q96IT1 587 aaPredicted RBP22.26■■□□□ 1.15
ALDH1A3-207ENST00000561338 RTCBQ9Y3I0 505 aaKnown RBP22.26■■□□□ 1.15
ALDH1A3-207ENST00000561338 ARFGEF1Q9Y6D6 1849 aa22.25■■□□□ 1.15
ALDH1A3-207ENST00000561338 TEFQ10587 303 aa22.25■■□□□ 1.15
ALDH1A3-207ENST00000561338 KLHL34Q8N239 644 aa22.25■■□□□ 1.15
ALDH1A3-207ENST00000561338 ARHGEF1Q92888 912 aaKnown RBP22.25■■□□□ 1.15
ALDH1A3-207ENST00000561338 PRKRIP1Q9H875 184 aaPredicted RBP22.25■■□□□ 1.15
ALDH1A3-207ENST00000561338 SOS1Q07889 1333 aaPredicted RBP22.25■■□□□ 1.15
ALDH1A3-207ENST00000561338 ZNF790Q6PG37 636 aa22.24■■□□□ 1.15
ALDH1A3-207ENST00000561338 ZBTB1Q9Y2K1 713 aa22.24■■□□□ 1.15
ALDH1A3-207ENST00000561338 COL15A1P39059 1388 aa22.24■■□□□ 1.15
ALDH1A3-207ENST00000561338 CACNA1SQ13698 1873 aa22.24■■□□□ 1.15
ALDH1A3-207ENST00000561338 C10orf71Q711Q0 1435 aa22.23■■□□□ 1.15
ALDH1A3-207ENST00000561338 COL11A2P13942 1736 aaPredicted RBP22.23■■□□□ 1.15
ALDH1A3-207ENST00000561338 GYS1P13807 737 aa22.23■■□□□ 1.15
ALDH1A3-207ENST00000561338 ADRA2BP18089 450 aa22.23■■□□□ 1.15
ALDH1A3-207ENST00000561338 CCDC87Q9NVE4 849 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms