RNA–Protein interactions for RNA: ENST00000561217.1

TNFAIP2-211, Transcript of TNF alpha induced protein 2, humanhuman

TSL 3

Gene TNFAIP2, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-211ENST00000561217 PCDH11XQ9BZA7 1347 aa14.55□□□□□ -0.08
TNFAIP2-211ENST00000561217 PCDH11YQ9BZA8 1340 aa14.55□□□□□ -0.08
TNFAIP2-211ENST00000561217 TATP17735 454 aaPredicted RBP14.54□□□□□ -0.08
TNFAIP2-211ENST00000561217 SMIM5Q71RC9 77 aa14.54□□□□□ -0.08
TNFAIP2-211ENST00000561217 TESK2Q96S53 571 aa14.54□□□□□ -0.08
TNFAIP2-211ENST00000561217 SMG6Q86US8 1419 aaKnown RBP14.54□□□□□ -0.08
TNFAIP2-211ENST00000561217 CICQ96RK0 1608 aaPredicted RBP14.54□□□□□ -0.08
TNFAIP2-211ENST00000561217 MAP2P11137 1827 aaKnown RBP14.54□□□□□ -0.08
TNFAIP2-211ENST00000561217 PKD1L3Q7Z443 1732 aa14.53□□□□□ -0.08
TNFAIP2-211ENST00000561217 KIF3CO14782 793 aa14.53□□□□□ -0.08
TNFAIP2-211ENST00000561217 MPRIPQ6WCQ1 1025 aa14.53□□□□□ -0.08
TNFAIP2-211ENST00000561217 AK7Q96M32 723 aa14.53□□□□□ -0.08
TNFAIP2-211ENST00000561217 CYP27B1O15528 508 aa14.52□□□□□ -0.09
TNFAIP2-211ENST00000561217 PHF14O94880 888 aa14.52□□□□□ -0.09
TNFAIP2-211ENST00000561217 CD44P16070 742 aaKnown RBP14.52□□□□□ -0.09
TNFAIP2-211ENST00000561217 NSD3Q9BZ95 1437 aa14.51□□□□□ -0.09
TNFAIP2-211ENST00000561217 INSRP06213 1382 aa14.51□□□□□ -0.09
TNFAIP2-211ENST00000561217 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.51□□□□□ -0.09
TNFAIP2-211ENST00000561217 HMGB2P26583 209 aaKnown RBP14.51□□□□□ -0.09
TNFAIP2-211ENST00000561217 GGNBP2Q9H3C7 697 aa14.51□□□□□ -0.09
TNFAIP2-211ENST00000561217 KIAA1551Q9HCM1 1747 aa14.51□□□□□ -0.09
TNFAIP2-211ENST00000561217 KIF20BQ96Q89 1820 aa14.5□□□□□ -0.09
TNFAIP2-211ENST00000561217 FYB1O15117 783 aa14.5□□□□□ -0.09
TNFAIP2-211ENST00000561217 HSP90AB2PQ58FF8 381 aa14.5□□□□□ -0.09
TNFAIP2-211ENST00000561217 SMARCC1Q92922 1105 aaPredicted RBP14.5□□□□□ -0.09
TNFAIP2-211ENST00000561217 KIF13BQ9NQT8 1826 aa14.5□□□□□ -0.09
TNFAIP2-211ENST00000561217 ST20-MTHFSA0A0A6YYL1 179 aa14.49□□□□□ -0.09
TNFAIP2-211ENST00000561217 SSFA2P28290 1259 aa14.49□□□□□ -0.09
TNFAIP2-211ENST00000561217 PIGBQ92521 554 aa14.49□□□□□ -0.09
TNFAIP2-211ENST00000561217 FLT4P35916 1363 aa14.48□□□□□ -0.09
TNFAIP2-211ENST00000561217 LINC00116Q8NCU8 138 aa14.48□□□□□ -0.09
TNFAIP2-211ENST00000561217 N4BP2Q86UW6 1770 aaPredicted RBP14.47□□□□□ -0.09
TNFAIP2-211ENST00000561217 PXDNLA1KZ92 1463 aa14.47□□□□□ -0.09
TNFAIP2-211ENST00000561217 NCAPD2Q15021 1401 aa14.47□□□□□ -0.09
TNFAIP2-211ENST00000561217 KIF24Q5T7B8 1368 aa14.47□□□□□ -0.09
TNFAIP2-211ENST00000561217 TONSLQ96HA7 1378 aa14.47□□□□□ -0.09
TNFAIP2-211ENST00000561217 LOC102724428A0A0B4J2F2 783 aa14.46□□□□□ -0.09
TNFAIP2-211ENST00000561217 SIK1P57059 783 aa14.46□□□□□ -0.09
TNFAIP2-211ENST00000561217 APLP1P51693 650 aa14.45□□□□□ -0.1
TNFAIP2-211ENST00000561217 ITPK1Q13572 414 aa14.45□□□□□ -0.1
TNFAIP2-211ENST00000561217 NKX1-1Q15270 411 aaPredicted RBP14.45□□□□□ -0.1
TNFAIP2-211ENST00000561217 CREBZFQ9NS37 354 aa14.45□□□□□ -0.1
TNFAIP2-211ENST00000561217 ANKRD26Q9UPS8 1709 aa14.44□□□□□ -0.1
TNFAIP2-211ENST00000561217 GNPATO15228 680 aa14.44□□□□□ -0.1
TNFAIP2-211ENST00000561217 WDR90Q96KV7 1748 aa14.44□□□□□ -0.1
TNFAIP2-211ENST00000561217 MMP10P09238 476 aa14.43□□□□□ -0.1
TNFAIP2-211ENST00000561217 DNAJC5GQ8N7S2 189 aa14.43□□□□□ -0.1
TNFAIP2-211ENST00000561217 ASAP1Q9ULH1 1129 aa14.43□□□□□ -0.1
TNFAIP2-211ENST00000561217 EMILIN1Q9Y6C2 1016 aa14.43□□□□□ -0.1
TNFAIP2-211ENST00000561217 BRCA1P38398 1863 aaKnown RBP14.43□□□□□ -0.1
TNFAIP2-211ENST00000561217 C10orf71Q711Q0 1435 aa14.42□□□□□ -0.1
TNFAIP2-211ENST00000561217 SLC24A1O60721 1099 aa14.42□□□□□ -0.1
TNFAIP2-211ENST00000561217 TOMM70O94826 608 aa14.42□□□□□ -0.1
TNFAIP2-211ENST00000561217 ATP6V1AP38606 617 aa14.41□□□□□ -0.1
TNFAIP2-211ENST00000561217 NMRK2Q9NPI5 230 aa14.41□□□□□ -0.1
TNFAIP2-211ENST00000561217 TMOD3Q9NYL9 352 aa14.41□□□□□ -0.1
TNFAIP2-211ENST00000561217 SPG7Q9UQ90 795 aa14.41□□□□□ -0.1
TNFAIP2-211ENST00000561217 BCS1LQ9Y276 419 aa14.41□□□□□ -0.1
TNFAIP2-211ENST00000561217 KDRP35968 1356 aa14.4□□□□□ -0.1
TNFAIP2-211ENST00000561217 A0A0G2JLW4 131 aa14.4□□□□□ -0.1
TNFAIP2-211ENST00000561217 TGFB2P61812 414 aa14.4□□□□□ -0.1
TNFAIP2-211ENST00000561217 C4AP0C0L4 1744 aa14.4□□□□□ -0.1
TNFAIP2-211ENST00000561217 COL5A3P25940 1745 aaPredicted RBP14.4□□□□□ -0.1
TNFAIP2-211ENST00000561217 ARFGEF1Q9Y6D6 1849 aa14.39□□□□□ -0.11
TNFAIP2-211ENST00000561217 ZNF831Q5JPB2 1677 aa14.39□□□□□ -0.11
TNFAIP2-211ENST00000561217 PHKG2P15735 406 aa14.38□□□□□ -0.11
TNFAIP2-211ENST00000561217 TMF1P82094 1093 aa14.38□□□□□ -0.11
TNFAIP2-211ENST00000561217 ATG3Q9NT62 314 aa14.38□□□□□ -0.11
TNFAIP2-211ENST00000561217 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.38□□□□□ -0.11
TNFAIP2-211ENST00000561217 DPEP1P16444 411 aa14.37□□□□□ -0.11
TNFAIP2-211ENST00000561217 ARHGAP27Q6ZUM4 889 aa14.37□□□□□ -0.11
TNFAIP2-211ENST00000561217 SLC4A9Q96Q91 983 aa14.37□□□□□ -0.11
TNFAIP2-211ENST00000561217 EYA1Q99502 592 aa14.37□□□□□ -0.11
TNFAIP2-211ENST00000561217 CARD14Q9BXL6 1004 aa14.37□□□□□ -0.11
TNFAIP2-211ENST00000561217 PPM1GO15355 546 aaPredicted RBP14.36□□□□□ -0.11
TNFAIP2-211ENST00000561217 HTRA3P83110 453 aa14.36□□□□□ -0.11
TNFAIP2-211ENST00000561217 TRAPPC3LQ5T215 181 aa14.36□□□□□ -0.11
TNFAIP2-211ENST00000561217 IFNL2Q8IZJ0 200 aa14.36□□□□□ -0.11
TNFAIP2-211ENST00000561217 NLGN1Q8N2Q7 840 aa14.36□□□□□ -0.11
TNFAIP2-211ENST00000561217 RTCBQ9Y3I0 505 aaKnown RBP14.36□□□□□ -0.11
TNFAIP2-211ENST00000561217 MYH14Q7Z406 1995 aaKnown RBP14.36□□□□□ -0.11
TNFAIP2-211ENST00000561217 WASHC2AQ641Q2 1341 aa14.36□□□□□ -0.11
TNFAIP2-211ENST00000561217 FCHSD2O94868 740 aa14.35□□□□□ -0.11
TNFAIP2-211ENST00000561217 GYS1P13807 737 aa14.35□□□□□ -0.11
TNFAIP2-211ENST00000561217 RBM46Q8TBY0 533 aaKnown RBP14.35□□□□□ -0.11
TNFAIP2-211ENST00000561217 ARHGEF1Q92888 912 aaKnown RBP14.35□□□□□ -0.11
TNFAIP2-211ENST00000561217 CCDC87Q9NVE4 849 aa14.35□□□□□ -0.11
TNFAIP2-211ENST00000561217 PLEKHG2Q9H7P9 1386 aa14.34□□□□□ -0.11
TNFAIP2-211ENST00000561217 KCNA3P22001 575 aa14.34□□□□□ -0.11
TNFAIP2-211ENST00000561217 C9orf131Q5VYM1 1079 aa14.34□□□□□ -0.11
TNFAIP2-211ENST00000561217 KLRG1Q96E93 195 aa14.34□□□□□ -0.11
TNFAIP2-211ENST00000561217 KCPQ6ZWJ8 1503 aa14.34□□□□□ -0.11
TNFAIP2-211ENST00000561217 CLCN6P51797 869 aa14.33□□□□□ -0.12
TNFAIP2-211ENST00000561217 COL13A1Q5TAT6 717 aaPredicted RBP14.33□□□□□ -0.12
TNFAIP2-211ENST00000561217 JMYQ8N9B5 988 aa14.33□□□□□ -0.12
TNFAIP2-211ENST00000561217 PCNTO95613 3336 aa14.33□□□□□ -0.12
TNFAIP2-211ENST00000561217 CNTNAP4Q9C0A0 1308 aa14.33□□□□□ -0.12
TNFAIP2-211ENST00000561217 TNRC6CQ9HCJ0 1690 aaKnown RBP14.33□□□□□ -0.12
TNFAIP2-211ENST00000561217 SBF1O95248 1867 aa14.32□□□□□ -0.12
TNFAIP2-211ENST00000561217 RC3H1Q5TC82 1133 aaKnown RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms