RNA–Protein interactions for RNA: ENST00000561010.5

GABPB1-211, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-211ENST00000561010 MYOM1P52179 1685 aa10.28□□□□□ -0.76
GABPB1-211ENST00000561010 FAM208AQ9UK61 1670 aaKnown RBP10.28□□□□□ -0.76
GABPB1-211ENST00000561010 TONSLQ96HA7 1378 aa10.27□□□□□ -0.76
GABPB1-211ENST00000561010 DOT1LQ8TEK3 1739 aa10.27□□□□□ -0.76
GABPB1-211ENST00000561010 A0A1W2PP64 1363 aa10.26□□□□□ -0.77
GABPB1-211ENST00000561010 PARD3Q8TEW0 1356 aa10.26□□□□□ -0.77
GABPB1-211ENST00000561010 KCNH5Q8NCM2 988 aa10.26□□□□□ -0.77
GABPB1-211ENST00000561010 MS4A4AQ96JQ5 239 aa10.26□□□□□ -0.77
GABPB1-211ENST00000561010 PDGFDQ9GZP0 370 aaPredicted RBP10.26□□□□□ -0.77
GABPB1-211ENST00000561010 ANO8Q9HCE9 1232 aaPredicted RBP10.26□□□□□ -0.77
GABPB1-211ENST00000561010 ABCC6O95255 1503 aa10.26□□□□□ -0.77
GABPB1-211ENST00000561010 SNPHO15079 494 aa10.25□□□□□ -0.77
GABPB1-211ENST00000561010 FBLN1P23142 703 aa10.25□□□□□ -0.77
GABPB1-211ENST00000561010 HS3ST6Q96QI5 342 aa10.25□□□□□ -0.77
GABPB1-211ENST00000561010 CARD10Q9BWT7 1032 aa10.25□□□□□ -0.77
GABPB1-211ENST00000561010 MAP2P11137 1827 aaKnown RBP10.25□□□□□ -0.77
GABPB1-211ENST00000561010 USP31Q70CQ4 1352 aa10.25□□□□□ -0.77
GABPB1-211ENST00000561010 TNS2Q63HR2 1409 aa10.24□□□□□ -0.77
GABPB1-211ENST00000561010 KCNQ2O43526 872 aa10.24□□□□□ -0.77
GABPB1-211ENST00000561010 VSIG10Q8N0Z9 540 aa10.24□□□□□ -0.77
GABPB1-211ENST00000561010 ACSBG1Q96GR2 724 aa10.24□□□□□ -0.77
GABPB1-211ENST00000561010 EDC4Q6P2E9 1401 aaKnown RBP10.24□□□□□ -0.77
GABPB1-211ENST00000561010 CHD4Q14839 1912 aa10.23□□□□□ -0.77
GABPB1-211ENST00000561010 ST20-MTHFSA0A0A6YYL1 179 aa10.23□□□□□ -0.77
GABPB1-211ENST00000561010 PPP1R37O75864 691 aa10.23□□□□□ -0.77
GABPB1-211ENST00000561010 HOXB3P14651 431 aaPredicted RBP10.23□□□□□ -0.77
GABPB1-211ENST00000561010 EMP3P54852 163 aa10.23□□□□□ -0.77
GABPB1-211ENST00000561010 NBPF14Q5TI25 921 aa10.23□□□□□ -0.77
GABPB1-211ENST00000561010 HDGFL2Q7Z4V5 671 aaPredicted RBP10.23□□□□□ -0.77
GABPB1-211ENST00000561010 LTV1Q96GA3 475 aaPredicted RBP10.23□□□□□ -0.77
GABPB1-211ENST00000561010 NLRP2Q9NX02 1062 aa10.23□□□□□ -0.77
GABPB1-211ENST00000561010 ITGB4P16144 1822 aa10.23□□□□□ -0.77
GABPB1-211ENST00000561010 PAPPAQ13219 1627 aa10.22□□□□□ -0.77
GABPB1-211ENST00000561010 ANKRD24Q8TF21 1146 aa10.22□□□□□ -0.77
GABPB1-211ENST00000561010 TESK2Q96S53 571 aa10.22□□□□□ -0.77
GABPB1-211ENST00000561010 ERBB3P21860 1342 aa10.22□□□□□ -0.77
GABPB1-211ENST00000561010 CCDC7Q96M83 1385 aa10.22□□□□□ -0.77
GABPB1-211ENST00000561010 LY75O60449 1722 aa10.21□□□□□ -0.77
GABPB1-211ENST00000561010 EXOC5O00471 708 aa10.21□□□□□ -0.77
GABPB1-211ENST00000561010 QSER1Q2KHR3 1735 aa10.21□□□□□ -0.78
GABPB1-211ENST00000561010 PLSCR1O15162 318 aa10.2□□□□□ -0.78
GABPB1-211ENST00000561010 C3orf67Q6ZVT6 689 aa10.2□□□□□ -0.78
GABPB1-211ENST00000561010 TAF1LQ8IZX4 1826 aa10.2□□□□□ -0.78
GABPB1-211ENST00000561010 CDCA7Q9BWT1 371 aaPredicted RBP10.2□□□□□ -0.78
GABPB1-211ENST00000561010 BCL9O00512 1426 aa10.19□□□□□ -0.78
GABPB1-211ENST00000561010 FAM205CA6NFA0 338 aa10.19□□□□□ -0.78
GABPB1-211ENST00000561010 ZBTB7AO95365 584 aa10.19□□□□□ -0.78
GABPB1-211ENST00000561010 IL2RBP14784 551 aa10.19□□□□□ -0.78
GABPB1-211ENST00000561010 TXNRD1Q16881 649 aa10.19□□□□□ -0.78
GABPB1-211ENST00000561010 SPON1Q9HCB6 807 aa10.19□□□□□ -0.78
GABPB1-211ENST00000561010 TERF2IPQ9NYB0 399 aa10.19□□□□□ -0.78
GABPB1-211ENST00000561010 PPP1R1BQ9UD71 204 aaPredicted RBP10.19□□□□□ -0.78
GABPB1-211ENST00000561010 TOGARAM1Q9Y4F4 1720 aa10.18□□□□□ -0.78
GABPB1-211ENST00000561010 USP47Q96K76 1375 aa10.17□□□□□ -0.78
GABPB1-211ENST00000561010 MAP3K19Q56UN5 1328 aa10.17□□□□□ -0.78
GABPB1-211ENST00000561010 ANKRD26Q9UPS8 1709 aa10.17□□□□□ -0.78
GABPB1-211ENST00000561010 C11orf95C9JLR9 678 aaPredicted RBP10.17□□□□□ -0.78
GABPB1-211ENST00000561010 KCNQ4P56696 695 aa10.17□□□□□ -0.78
GABPB1-211ENST00000561010 TRIM26Q12899 539 aaPredicted RBP10.17□□□□□ -0.78
GABPB1-211ENST00000561010 L3MBTL3Q96JM7 780 aaPredicted RBP10.17□□□□□ -0.78
GABPB1-211ENST00000561010 MEGF6O75095 1541 aa10.17□□□□□ -0.78
GABPB1-211ENST00000561010 G3V3G9 751 aa10.16□□□□□ -0.78
GABPB1-211ENST00000561010 HOXC9P31274 260 aa10.16□□□□□ -0.78
GABPB1-211ENST00000561010 RRS1Q15050 365 aaKnown RBP10.16□□□□□ -0.78
GABPB1-211ENST00000561010 USHBP1Q8N6Y0 703 aa10.16□□□□□ -0.78
GABPB1-211ENST00000561010 DDX54Q8TDD1 881 aaKnown RBP10.16□□□□□ -0.78
GABPB1-211ENST00000561010 IP6K1Q92551 441 aa10.16□□□□□ -0.78
GABPB1-211ENST00000561010 COG3Q96JB2 828 aa10.16□□□□□ -0.78
GABPB1-211ENST00000561010 GGNBP2Q9H3C7 697 aa10.16□□□□□ -0.78
GABPB1-211ENST00000561010 COL24A1Q17RW2 1714 aa10.16□□□□□ -0.78
GABPB1-211ENST00000561010 C5P01031 1676 aa10.15□□□□□ -0.78
GABPB1-211ENST00000561010 ANKRD36BQ8N2N9 1353 aa10.15□□□□□ -0.78
GABPB1-211ENST00000561010 VIRMAQ69YN4 1812 aaKnown RBP10.15□□□□□ -0.78
GABPB1-211ENST00000561010 STK32BQ9NY57 414 aa10.15□□□□□ -0.78
GABPB1-211ENST00000561010 PKD1L3Q7Z443 1732 aa10.14□□□□□ -0.79
GABPB1-211ENST00000561010 PTGER2P43116 358 aa10.14□□□□□ -0.79
GABPB1-211ENST00000561010 AMPHP49418 695 aa10.14□□□□□ -0.79
GABPB1-211ENST00000561010 SLC15A2Q16348 729 aa10.14□□□□□ -0.79
GABPB1-211ENST00000561010 ZNF827Q17R98 1081 aa10.14□□□□□ -0.79
GABPB1-211ENST00000561010 LRRC4BQ9NT99 713 aa10.14□□□□□ -0.79
GABPB1-211ENST00000561010 NINLQ9Y2I6 1382 aa10.14□□□□□ -0.79
GABPB1-211ENST00000561010 FYB1O15117 783 aa10.13□□□□□ -0.79
GABPB1-211ENST00000561010 SYTL4Q96C24 671 aaPredicted RBP10.13□□□□□ -0.79
GABPB1-211ENST00000561010 PUS7Q96PZ0 661 aaKnown RBP10.13□□□□□ -0.79
GABPB1-211ENST00000561010 TMF1P82094 1093 aa10.12□□□□□ -0.79
GABPB1-211ENST00000561010 NBPF6Q5VWK0 638 aa10.12□□□□□ -0.79
GABPB1-211ENST00000561010 NBPF4Q96M43 638 aa10.12□□□□□ -0.79
GABPB1-211ENST00000561010 BOLA1Q9Y3E2 137 aa10.12□□□□□ -0.79
GABPB1-211ENST00000561010 NSD2O96028 1365 aa10.12□□□□□ -0.79
GABPB1-211ENST00000561010 UBR3Q6ZT12 1888 aa10.11□□□□□ -0.79
GABPB1-211ENST00000561010 YY1P25490 414 aa10.11□□□□□ -0.79
GABPB1-211ENST00000561010 PRIM1P49642 420 aaKnown RBP10.11□□□□□ -0.79
GABPB1-211ENST00000561010 MICALL2Q8IY33 904 aa10.11□□□□□ -0.79
GABPB1-211ENST00000561010 CARD14Q9BXL6 1004 aa10.11□□□□□ -0.79
GABPB1-211ENST00000561010 PCGF6Q9BYE7 350 aa10.11□□□□□ -0.79
GABPB1-211ENST00000561010 NSD3Q9BZ95 1437 aa10.1□□□□□ -0.79
GABPB1-211ENST00000561010 HSP90AB2PQ58FF8 381 aa10.1□□□□□ -0.79
GABPB1-211ENST00000561010 FHDC1Q9C0D6 1143 aaPredicted RBP10.1□□□□□ -0.79
GABPB1-211ENST00000561010 TMEM92Q6UXU6 159 aa10.09□□□□□ -0.79
GABPB1-211ENST00000561010 ZCRB1Q8TBF4 217 aaKnown RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms