RNA–Protein interactions for RNA: ENST00000560997.1

SNX22-206, Transcript of sorting nexin 22, humanhuman

TSL 1 (best)

Gene SNX22, Length 3,367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX22-206ENST00000560997 FKBP5Q13451 457 aaPredicted RBP12.05□□□□□ -0.48
SNX22-206ENST00000560997 CASC1Q6TDU7 716 aa12.05□□□□□ -0.48
SNX22-206ENST00000560997 NWD1Q149M9 1564 aa12.05□□□□□ -0.48
SNX22-206ENST00000560997 MARF1Q9Y4F3 1742 aaKnown RBP12.05□□□□□ -0.48
SNX22-206ENST00000560997 PNMA6EA0A0J9YXQ4 647 aa12.04□□□□□ -0.48
SNX22-206ENST00000560997 GNAT3A8MTJ3 354 aa12.04□□□□□ -0.48
SNX22-206ENST00000560997 PKP1Q13835 747 aa12.04□□□□□ -0.48
SNX22-206ENST00000560997 IL17REQ8NFR9 667 aa12.04□□□□□ -0.48
SNX22-206ENST00000560997 XRN1Q8IZH2 1706 aaKnown RBP12.04□□□□□ -0.48
SNX22-206ENST00000560997 BAG4O95429 457 aaKnown RBP12.04□□□□□ -0.48
SNX22-206ENST00000560997 KCNA6P17658 529 aa12.04□□□□□ -0.48
SNX22-206ENST00000560997 USHBP1Q8N6Y0 703 aa12.04□□□□□ -0.48
SNX22-206ENST00000560997 EIF5BO60841 1220 aaKnown RBP12.03□□□□□ -0.48
SNX22-206ENST00000560997 OSBPL3Q9H4L5 887 aa12.03□□□□□ -0.48
SNX22-206ENST00000560997 ERC2O15083 957 aa12.03□□□□□ -0.48
SNX22-206ENST00000560997 CCDC30Q5VVM6 783 aa12.03□□□□□ -0.48
SNX22-206ENST00000560997 ZGPATQ8N5A5 531 aaKnown RBP12.03□□□□□ -0.48
SNX22-206ENST00000560997 REC8O95072 547 aa12.02□□□□□ -0.48
SNX22-206ENST00000560997 SKOR2Q2VWA4 1001 aaPredicted RBP12.02□□□□□ -0.48
SNX22-206ENST00000560997 SALL3Q9BXA9 1300 aa12.02□□□□□ -0.48
SNX22-206ENST00000560997 HTATSF1O43719 755 aaKnown RBP12.02□□□□□ -0.49
SNX22-206ENST00000560997 CLEC17AQ6ZS10 378 aa12.02□□□□□ -0.49
SNX22-206ENST00000560997 MAP3K5Q99683 1374 aa12.02□□□□□ -0.49
SNX22-206ENST00000560997 ABTB2Q8N961 1025 aa12.02□□□□□ -0.49
SNX22-206ENST00000560997 LRRCC1Q9C099 1032 aa12.01□□□□□ -0.49
SNX22-206ENST00000560997 LRRFIP2Q9Y608 721 aaKnown RBP12.01□□□□□ -0.49
SNX22-206ENST00000560997 TUBGCP6Q96RT7 1819 aa12.01□□□□□ -0.49
SNX22-206ENST00000560997 C14orf37Q86TY3 774 aa12.01□□□□□ -0.49
SNX22-206ENST00000560997 ST18O60284 1047 aa12.01□□□□□ -0.49
SNX22-206ENST00000560997 CYP2E1P05181 493 aaPredicted RBP12.01□□□□□ -0.49
SNX22-206ENST00000560997 GNAI3P08754 354 aa12.01□□□□□ -0.49
SNX22-206ENST00000560997 THEMISQ8N1K5 641 aaPredicted RBP12.01□□□□□ -0.49
SNX22-206ENST00000560997 MX1P20591 662 aa12□□□□□ -0.49
SNX22-206ENST00000560997 PTMSP20962 102 aa12□□□□□ -0.49
SNX22-206ENST00000560997 ATP8B2P98198 1209 aa12□□□□□ -0.49
SNX22-206ENST00000560997 MCTP1Q6DN14 999 aa12□□□□□ -0.49
SNX22-206ENST00000560997 ANKARQ7Z5J8 1434 aa12□□□□□ -0.49
SNX22-206ENST00000560997 GOLGA6L22H0YM25 854 aa12□□□□□ -0.49
SNX22-206ENST00000560997 TAF7Q15545 349 aaPredicted RBP12□□□□□ -0.49
SNX22-206ENST00000560997 PHAXQ9H814 394 aaKnown RBP12□□□□□ -0.49
SNX22-206ENST00000560997 ISY1Q9ULR0 285 aaKnown RBP12□□□□□ -0.49
SNX22-206ENST00000560997 DDX49Q9Y6V7 483 aaKnown RBP12□□□□□ -0.49
SNX22-206ENST00000560997 USP44Q9H0E7 712 aa11.99□□□□□ -0.49
SNX22-206ENST00000560997 IBTKQ9P2D0 1353 aaPredicted RBP11.99□□□□□ -0.49
SNX22-206ENST00000560997 FER1L4A9Z1Z3 1794 aa11.99□□□□□ -0.49
SNX22-206ENST00000560997 SETD1BQ9UPS6 1966 aaKnown RBP11.99□□□□□ -0.49
SNX22-206ENST00000560997 NUCB2P80303 420 aa11.99□□□□□ -0.49
SNX22-206ENST00000560997 RILPL2Q969X0 211 aa11.99□□□□□ -0.49
SNX22-206ENST00000560997 RBM33Q96EV2 1170 aaKnown RBP11.99□□□□□ -0.49
SNX22-206ENST00000560997 CHAMP1Q96JM3 812 aa11.99□□□□□ -0.49
SNX22-206ENST00000560997 ESYT1Q9BSJ8 1104 aa11.99□□□□□ -0.49
SNX22-206ENST00000560997 CACNA1FO60840 1977 aa11.99□□□□□ -0.49
SNX22-206ENST00000560997 KLHL40Q2TBA0 621 aa11.98□□□□□ -0.49
SNX22-206ENST00000560997 UNC5CLQ8IV45 518 aa11.98□□□□□ -0.49
SNX22-206ENST00000560997 TRIM6-TRIM34B2RNG4 842 aa11.98□□□□□ -0.49
SNX22-206ENST00000560997 HDGFL1Q5TGJ6 251 aa11.98□□□□□ -0.49
SNX22-206ENST00000560997 PALD1Q9ULE6 856 aa11.98□□□□□ -0.49
SNX22-206ENST00000560997 ZDHHC9Q9Y397 364 aa11.98□□□□□ -0.49
SNX22-206ENST00000560997 IL1RAPL2Q9NP60 686 aa11.98□□□□□ -0.49
SNX22-206ENST00000560997 N4BP2Q86UW6 1770 aaPredicted RBP11.97□□□□□ -0.49
SNX22-206ENST00000560997 UBTFL1P0CB47 393 aaPredicted RBP11.97□□□□□ -0.49
SNX22-206ENST00000560997 NEK4P51957 841 aa11.97□□□□□ -0.49
SNX22-206ENST00000560997 LTN1O94822 1766 aa11.97□□□□□ -0.49
SNX22-206ENST00000560997 USP54Q70EL1 1684 aa11.97□□□□□ -0.49
SNX22-206ENST00000560997 CHMLP26374 656 aa11.97□□□□□ -0.49
SNX22-206ENST00000560997 CWC22Q9HCG8 908 aaKnown RBP11.97□□□□□ -0.49
SNX22-206ENST00000560997 LMBRD1Q9NUN5 540 aa11.97□□□□□ -0.49
SNX22-206ENST00000560997 EIF2S2P20042 333 aaKnown RBP11.96□□□□□ -0.49
SNX22-206ENST00000560997 ERBB4Q15303 1308 aa11.96□□□□□ -0.49
SNX22-206ENST00000560997 IL25Q9H293 177 aa11.96□□□□□ -0.49
SNX22-206ENST00000560997 LGR6Q9HBX8 967 aa11.96□□□□□ -0.49
SNX22-206ENST00000560997 ANO2Q9NQ90 1003 aa11.96□□□□□ -0.49
SNX22-206ENST00000560997 ZBTB7CA1YPR0 619 aa11.96□□□□□ -0.5
SNX22-206ENST00000560997 FOXD4L5Q5VV16 416 aaPredicted RBP11.96□□□□□ -0.5
SNX22-206ENST00000560997 NUTM1Q86Y26 1132 aa11.96□□□□□ -0.5
SNX22-206ENST00000560997 FOXD4L4Q8WXT5 416 aaPredicted RBP11.96□□□□□ -0.5
SNX22-206ENST00000560997 TMX3Q96JJ7 454 aa11.96□□□□□ -0.5
SNX22-206ENST00000560997 PXDNLA1KZ92 1463 aa11.96□□□□□ -0.5
SNX22-206ENST00000560997 NCLP19338 710 aaKnown RBP11.95□□□□□ -0.5
SNX22-206ENST00000560997 NBPF6Q5VWK0 638 aa11.95□□□□□ -0.5
SNX22-206ENST00000560997 NOL8Q76FK4 1167 aaKnown RBP11.95□□□□□ -0.5
SNX22-206ENST00000560997 NBPF4Q96M43 638 aa11.95□□□□□ -0.5
SNX22-206ENST00000560997 STAP2Q9UGK3 403 aa11.95□□□□□ -0.5
SNX22-206ENST00000560997 KCNQ3O43525 872 aa11.95□□□□□ -0.5
SNX22-206ENST00000560997 CAVIN1Q6NZI2 390 aaKnown RBP11.95□□□□□ -0.5
SNX22-206ENST00000560997 PHF8Q9UPP1 1060 aa11.95□□□□□ -0.5
SNX22-206ENST00000560997 SOS1Q07889 1333 aaPredicted RBP11.95□□□□□ -0.5
SNX22-206ENST00000560997 PPP1R42Q7Z4L9 355 aa11.95□□□□□ -0.5
SNX22-206ENST00000560997 BABAM1Q9NWV8 329 aa11.95□□□□□ -0.5
SNX22-206ENST00000560997 CEMIPQ8WUJ3 1361 aa11.94□□□□□ -0.5
SNX22-206ENST00000560997 MAP4K4O95819 1239 aaPredicted RBP11.94□□□□□ -0.5
SNX22-206ENST00000560997 ANXA1P04083 346 aa11.94□□□□□ -0.5
SNX22-206ENST00000560997 SSH3Q8TE77 659 aa11.94□□□□□ -0.5
SNX22-206ENST00000560997 PRPF40AO75400 957 aaKnown RBP11.94□□□□□ -0.5
SNX22-206ENST00000560997 CLCN1P35523 988 aa11.94□□□□□ -0.5
SNX22-206ENST00000560997 EIF4A1P60842 406 aaKnown RBP11.94□□□□□ -0.5
SNX22-206ENST00000560997 IP6K1Q92551 441 aa11.94□□□□□ -0.5
SNX22-206ENST00000560997 CHPF2Q9P2E5 772 aa11.94□□□□□ -0.5
SNX22-206ENST00000560997 RGPD2P0DJD1 1756 aa11.93□□□□□ -0.5
SNX22-206ENST00000560997 NBPF7P0C2Y1 421 aaPredicted RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms