RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 PHKG2P15735 406 aa25.78■■□□□ 1.72
TPM1-226ENST00000560959 APLP1P51693 650 aa25.78■■□□□ 1.72
TPM1-226ENST00000560959 ATG3Q9NT62 314 aa25.78■■□□□ 1.72
TPM1-226ENST00000560959 KIF20BQ96Q89 1820 aa25.77■■□□□ 1.72
TPM1-226ENST00000560959 PPM1GO15355 546 aaPredicted RBP25.76■■□□□ 1.71
TPM1-226ENST00000560959 TOMM70O94826 608 aa25.76■■□□□ 1.71
TPM1-226ENST00000560959 TRAPPC3LQ5T215 181 aa25.76■■□□□ 1.71
TPM1-226ENST00000560959 RTCBQ9Y3I0 505 aaKnown RBP25.76■■□□□ 1.71
TPM1-226ENST00000560959 RC3H1Q5TC82 1133 aaKnown RBP25.75■■□□□ 1.71
TPM1-226ENST00000560959 PXDNLA1KZ92 1463 aa25.74■■□□□ 1.71
TPM1-226ENST00000560959 ADRA2BP18089 450 aa25.74■■□□□ 1.71
TPM1-226ENST00000560959 ERVV-2B6SEH9 535 aa25.72■■□□□ 1.71
TPM1-226ENST00000560959 DNAJC5GQ8N7S2 189 aa25.71■■□□□ 1.71
TPM1-226ENST00000560959 POLKQ9UBT6 870 aa25.71■■□□□ 1.71
TPM1-226ENST00000560959 BCS1LQ9Y276 419 aa25.71■■□□□ 1.71
TPM1-226ENST00000560959 KDRP35968 1356 aa25.7■■□□□ 1.71
TPM1-226ENST00000560959 A0A0G2JLW4 131 aa25.7■■□□□ 1.7
TPM1-226ENST00000560959 KIF13BQ9NQT8 1826 aa25.7■■□□□ 1.7
TPM1-226ENST00000560959 ARHGEF1Q92888 912 aaKnown RBP25.69■■□□□ 1.7
TPM1-226ENST00000560959 CCDC87Q9NVE4 849 aa25.69■■□□□ 1.7
TPM1-226ENST00000560959 C10orf71Q711Q0 1435 aa25.69■■□□□ 1.7
TPM1-226ENST00000560959 ANKRD26Q9UPS8 1709 aa25.68■■□□□ 1.7
TPM1-226ENST00000560959 HSP90AB1P08238 724 aaKnown RBP25.68■■□□□ 1.7
TPM1-226ENST00000560959 ARHGAP27Q6ZUM4 889 aa25.68■■□□□ 1.7
TPM1-226ENST00000560959 SLC4A9Q96Q91 983 aa25.68■■□□□ 1.7
TPM1-226ENST00000560959 CNTNAP4Q9C0A0 1308 aa25.67■■□□□ 1.7
TPM1-226ENST00000560959 RPS6KA4O75676 772 aa25.67■■□□□ 1.7
TPM1-226ENST00000560959 GYS1P13807 737 aa25.67■■□□□ 1.7
TPM1-226ENST00000560959 DCAF5Q96JK2 942 aa25.67■■□□□ 1.7
TPM1-226ENST00000560959 RFC4P35249 363 aa25.66■■□□□ 1.7
TPM1-226ENST00000560959 ZNF831Q5JPB2 1677 aa25.65■■□□□ 1.7
TPM1-226ENST00000560959 DPEP1P16444 411 aa25.65■■□□□ 1.7
TPM1-226ENST00000560959 EIF4A2Q14240 407 aaKnown RBP25.65■■□□□ 1.7
TPM1-226ENST00000560959 PARP3Q9Y6F1 533 aa25.65■■□□□ 1.7
TPM1-226ENST00000560959 KIAA1551Q9HCM1 1747 aa25.64■■□□□ 1.7
TPM1-226ENST00000560959 FCHSD2O94868 740 aa25.64■■□□□ 1.7
TPM1-226ENST00000560959 RBM46Q8TBY0 533 aaKnown RBP25.64■■□□□ 1.7
TPM1-226ENST00000560959 RBM42Q9BTD8 480 aaKnown RBP25.64■■□□□ 1.7
TPM1-226ENST00000560959 KCNA3P22001 575 aa25.63■■□□□ 1.69
TPM1-226ENST00000560959 NMRK2Q9NPI5 230 aa25.62■■□□□ 1.69
TPM1-226ENST00000560959 PLEKHO1Q53GL0 409 aaPredicted RBP25.61■■□□□ 1.69
TPM1-226ENST00000560959 AMOTQ4VCS5 1084 aa25.6■■□□□ 1.69
TPM1-226ENST00000560959 PIM2Q9P1W9 311 aa25.6■■□□□ 1.69
TPM1-226ENST00000560959 C9orf131Q5VYM1 1079 aa25.59■■□□□ 1.69
TPM1-226ENST00000560959 N4BP2Q86UW6 1770 aaPredicted RBP25.59■■□□□ 1.69
TPM1-226ENST00000560959 C4AP0C0L4 1744 aa25.58■■□□□ 1.69
TPM1-226ENST00000560959 FSTL1Q12841 308 aa25.58■■□□□ 1.69
TPM1-226ENST00000560959 CABP4P57796 275 aa25.57■■□□□ 1.68
TPM1-226ENST00000560959 C16orf71Q8IYS4 520 aaPredicted RBP25.56■■□□□ 1.68
TPM1-226ENST00000560959 DALRD3Q5D0E6 543 aaKnown RBP25.55■■□□□ 1.68
TPM1-226ENST00000560959 KDM2BQ8NHM5 1336 aa25.55■■□□□ 1.68
TPM1-226ENST00000560959 JMYQ8N9B5 988 aa25.54■■□□□ 1.68
TPM1-226ENST00000560959 TIMELESSQ9UNS1 1208 aa25.54■■□□□ 1.68
TPM1-226ENST00000560959 COL5A3P25940 1745 aaPredicted RBP25.54■■□□□ 1.68
TPM1-226ENST00000560959 ZNF530Q6P9A1 599 aaPredicted RBP25.53■■□□□ 1.68
TPM1-226ENST00000560959 KLRG1Q96E93 195 aa25.53■■□□□ 1.68
TPM1-226ENST00000560959 KDM6AO15550 1401 aaPredicted RBP25.53■■□□□ 1.68
TPM1-226ENST00000560959 BRCA1P38398 1863 aaKnown RBP25.52■■□□□ 1.68
TPM1-226ENST00000560959 CRKLP46109 303 aaKnown RBP25.52■■□□□ 1.68
TPM1-226ENST00000560959 MTHFSP49914 203 aa25.52■■□□□ 1.68
TPM1-226ENST00000560959 USP42Q9H9J4 1324 aaKnown RBP25.52■■□□□ 1.68
TPM1-226ENST00000560959 TNNT2P45379 298 aaPredicted RBP25.51■■□□□ 1.67
TPM1-226ENST00000560959 PTCD1O75127 700 aaKnown RBP25.5■■□□□ 1.67
TPM1-226ENST00000560959 FKBP8Q14318 412 aa25.5■■□□□ 1.67
TPM1-226ENST00000560959 ARFGEF1Q9Y6D6 1849 aa25.49■■□□□ 1.67
TPM1-226ENST00000560959 C1orf141Q5JVX7 400 aa25.49■■□□□ 1.67
TPM1-226ENST00000560959 NFATC2IPQ8NCF5 419 aa25.49■■□□□ 1.67
TPM1-226ENST00000560959 MYH14Q7Z406 1995 aaKnown RBP25.48■■□□□ 1.67
TPM1-226ENST00000560959 TM4SF1P30408 202 aa25.48■■□□□ 1.67
TPM1-226ENST00000560959 DDR1Q08345 913 aa25.48■■□□□ 1.67
TPM1-226ENST00000560959 RNF181Q9P0P0 153 aa25.48■■□□□ 1.67
TPM1-226ENST00000560959 SRP68Q9UHB9 627 aaKnown RBP25.48■■□□□ 1.67
TPM1-226ENST00000560959 ZC3H4Q9UPT8 1303 aaKnown RBP25.46■■□□□ 1.67
TPM1-226ENST00000560959 RRAGCQ9HB90 399 aa25.46■■□□□ 1.67
TPM1-226ENST00000560959 WDR90Q96KV7 1748 aa25.46■■□□□ 1.67
TPM1-226ENST00000560959 POLRMTO00411 1230 aaKnown RBP25.45■■□□□ 1.66
TPM1-226ENST00000560959 INTS5Q6P9B9 1019 aaKnown RBP25.45■■□□□ 1.66
TPM1-226ENST00000560959 KCPQ6ZWJ8 1503 aa25.44■■□□□ 1.66
TPM1-226ENST00000560959 CHRNA5P30532 468 aa25.43■■□□□ 1.66
TPM1-226ENST00000560959 SMC1BQ8NDV3 1235 aa25.43■■□□□ 1.66
TPM1-226ENST00000560959 ZPR1O75312 459 aa25.42■■□□□ 1.66
TPM1-226ENST00000560959 HTRA3P83110 453 aa25.42■■□□□ 1.66
TPM1-226ENST00000560959 AEBP1Q8IUX7 1158 aa25.41■■□□□ 1.66
TPM1-226ENST00000560959 COL13A1Q5TAT6 717 aaPredicted RBP25.4■■□□□ 1.66
TPM1-226ENST00000560959 PANK3Q9H999 370 aa25.4■■□□□ 1.66
TPM1-226ENST00000560959 SULT6B1Q6IMI4 303 aa25.39■■□□□ 1.66
TPM1-226ENST00000560959 POLR3GLQ9BT43 218 aa25.39■■□□□ 1.66
TPM1-226ENST00000560959 AKAP4Q5JQC9 854 aa25.38■■□□□ 1.65
TPM1-226ENST00000560959 USPL1Q5W0Q7 1092 aa25.38■■□□□ 1.65
TPM1-226ENST00000560959 SOS1Q07889 1333 aaPredicted RBP25.37■■□□□ 1.65
TPM1-226ENST00000560959 LMNB1P20700 586 aa25.37■■□□□ 1.65
TPM1-226ENST00000560959 SLC52A2Q9HAB3 445 aa25.37■■□□□ 1.65
TPM1-226ENST00000560959 NARFQ9UHQ1 456 aa25.37■■□□□ 1.65
TPM1-226ENST00000560959 PCNTO95613 3336 aa25.36■■□□□ 1.65
TPM1-226ENST00000560959 GLTPD2A6NH11 291 aa25.36■■□□□ 1.65
TPM1-226ENST00000560959 VEGFAP15692 232 aaPredicted RBP25.36■■□□□ 1.65
TPM1-226ENST00000560959 MORC1Q86VD1 984 aa25.36■■□□□ 1.65
TPM1-226ENST00000560959 DNAJC10Q8IXB1 793 aa25.36■■□□□ 1.65
TPM1-226ENST00000560959 TNRC6CQ9HCJ0 1690 aaKnown RBP25.36■■□□□ 1.65
TPM1-226ENST00000560959 CYP19A1P11511 503 aaPredicted RBP25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms