RNA–Protein interactions for RNA: ENST00000560945.1

SNX22-205, Transcript of sorting nexin 22, humanhuman

TSL 1 (best)

Gene SNX22, Length 1,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX22-205ENST00000560945 UNC5CLQ8IV45 518 aa28.72■■■□□ 2.19
SNX22-205ENST00000560945 KDM3BQ7LBC6 1761 aa28.72■■■□□ 2.19
SNX22-205ENST00000560945 SPATA31A5Q5VU36 1347 aa28.72■■■□□ 2.19
SNX22-205ENST00000560945 SPATA31A7Q8IWB4 1347 aa28.72■■■□□ 2.19
SNX22-205ENST00000560945 SLC52A2Q9HAB3 445 aa28.71■■■□□ 2.19
SNX22-205ENST00000560945 CCDC9Q9Y3X0 531 aaKnown RBP28.71■■■□□ 2.19
SNX22-205ENST00000560945 ERICH6BQ5W0A0 696 aa28.71■■■□□ 2.19
SNX22-205ENST00000560945 MRPL50Q8N5N7 158 aaKnown RBP28.71■■■□□ 2.19
SNX22-205ENST00000560945 WNK3Q9BYP7 1800 aa28.7■■■□□ 2.19
SNX22-205ENST00000560945 NFATC2IPQ8NCF5 419 aa28.7■■■□□ 2.18
SNX22-205ENST00000560945 NOB1Q9ULX3 412 aaKnown RBP28.7■■■□□ 2.18
SNX22-205ENST00000560945 PANK1Q8TE04 598 aa28.69■■■□□ 2.18
SNX22-205ENST00000560945 ZNF428Q96B54 188 aa28.69■■■□□ 2.18
SNX22-205ENST00000560945 EIF4A1P60842 406 aaKnown RBP28.69■■■□□ 2.18
SNX22-205ENST00000560945 FNBP4Q8N3X1 1017 aaPredicted RBP28.69■■■□□ 2.18
SNX22-205ENST00000560945 MRC1P22897 1456 aa28.69■■■□□ 2.18
SNX22-205ENST00000560945 HSP90AB1P08238 724 aaKnown RBP28.68■■■□□ 2.18
SNX22-205ENST00000560945 RLBP1P12271 317 aa28.68■■■□□ 2.18
SNX22-205ENST00000560945 CLUAP1Q96AJ1 413 aa28.67■■■□□ 2.18
SNX22-205ENST00000560945 SLC39A6Q13433 755 aa28.66■■■□□ 2.18
SNX22-205ENST00000560945 NKX1-1Q15270 411 aaPredicted RBP28.66■■■□□ 2.18
SNX22-205ENST00000560945 PPP4R2Q9NY27 417 aa28.66■■■□□ 2.18
SNX22-205ENST00000560945 ZKSCAN2Q63HK3 967 aa28.65■■■□□ 2.18
SNX22-205ENST00000560945 USP21Q9UK80 565 aa28.64■■■□□ 2.18
SNX22-205ENST00000560945 THRAP3Q9Y2W1 955 aaKnown RBP28.64■■■□□ 2.18
SNX22-205ENST00000560945 CABP4P57796 275 aa28.64■■■□□ 2.17
SNX22-205ENST00000560945 NECTIN2Q92692 538 aa28.64■■■□□ 2.17
SNX22-205ENST00000560945 TRIM27P14373 513 aa28.63■■■□□ 2.17
SNX22-205ENST00000560945 PDE3AQ14432 1141 aa28.63■■■□□ 2.17
SNX22-205ENST00000560945 VPS72Q15906 364 aa28.63■■■□□ 2.17
SNX22-205ENST00000560945 KIF16BQ96L93 1317 aa28.63■■■□□ 2.17
SNX22-205ENST00000560945 BRPF1P55201 1214 aaPredicted RBP28.62■■■□□ 2.17
SNX22-205ENST00000560945 B4GALNT3Q6L9W6 998 aa28.62■■■□□ 2.17
SNX22-205ENST00000560945 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.62■■■□□ 2.17
SNX22-205ENST00000560945 COG6Q9Y2V7 657 aa28.62■■■□□ 2.17
SNX22-205ENST00000560945 TOGARAM1Q9Y4F4 1720 aa28.62■■■□□ 2.17
SNX22-205ENST00000560945 TNS2Q63HR2 1409 aa28.62■■■□□ 2.17
SNX22-205ENST00000560945 EXOC5O00471 708 aa28.62■■■□□ 2.17
SNX22-205ENST00000560945 ATF7IPQ6VMQ6 1270 aa28.6■■■□□ 2.17
SNX22-205ENST00000560945 PRAMEF22A3QJZ6 481 aa28.59■■■□□ 2.17
SNX22-205ENST00000560945 ZNF790Q6PG37 636 aa28.59■■■□□ 2.17
SNX22-205ENST00000560945 BARGINQ6ZT62 677 aa28.59■■■□□ 2.17
SNX22-205ENST00000560945 AFF2P51816 1311 aa28.59■■■□□ 2.17
SNX22-205ENST00000560945 FAM98CQ17RN3 349 aaKnown RBP28.59■■■□□ 2.17
SNX22-205ENST00000560945 CDCA7Q9BWT1 371 aaPredicted RBP28.58■■■□□ 2.17
SNX22-205ENST00000560945 ERVV-2B6SEH9 535 aa28.57■■■□□ 2.16
SNX22-205ENST00000560945 HEG1Q9ULI3 1381 aa28.57■■■□□ 2.16
SNX22-205ENST00000560945 DDB1Q16531 1140 aa28.57■■■□□ 2.16
SNX22-205ENST00000560945 DZIP1LQ8IYY4 767 aaKnown RBP28.57■■■□□ 2.16
SNX22-205ENST00000560945 G2E3Q7L622 706 aa28.56■■■□□ 2.16
SNX22-205ENST00000560945 SLC4A2P04920 1241 aa28.55■■■□□ 2.16
SNX22-205ENST00000560945 EIF2S2P20042 333 aaKnown RBP28.55■■■□□ 2.16
SNX22-205ENST00000560945 GIGYF1O75420 1035 aaPredicted RBP28.55■■■□□ 2.16
SNX22-205ENST00000560945 HDGFL1Q5TGJ6 251 aa28.55■■■□□ 2.16
SNX22-205ENST00000560945 IPO8O15397 1037 aaKnown RBP28.54■■■□□ 2.16
SNX22-205ENST00000560945 FTSJ3Q8IY81 847 aaKnown RBP28.54■■■□□ 2.16
SNX22-205ENST00000560945 ZNF496Q96IT1 587 aaPredicted RBP28.54■■■□□ 2.16
SNX22-205ENST00000560945 SOS1Q07889 1333 aaPredicted RBP28.53■■■□□ 2.16
SNX22-205ENST00000560945 CCDC30Q5VVM6 783 aa28.53■■■□□ 2.16
SNX22-205ENST00000560945 MARCH10Q8NA82 808 aaPredicted RBP28.53■■■□□ 2.16
SNX22-205ENST00000560945 TMEM57Q8N5G2 664 aa28.52■■■□□ 2.16
SNX22-205ENST00000560945 ILDR1Q86SU0 546 aaPredicted RBP28.51■■■□□ 2.15
SNX22-205ENST00000560945 HOXB7P09629 217 aa28.5■■■□□ 2.15
SNX22-205ENST00000560945 ARHGAP45Q92619 1136 aa28.5■■■□□ 2.15
SNX22-205ENST00000560945 GLI3P10071 1580 aa28.5■■■□□ 2.15
SNX22-205ENST00000560945 RGS12O14924 1447 aa28.5■■■□□ 2.15
SNX22-205ENST00000560945 TTC5Q8N0Z6 440 aa28.5■■■□□ 2.15
SNX22-205ENST00000560945 STK31Q9BXU1 1019 aa28.5■■■□□ 2.15
SNX22-205ENST00000560945 C5P01031 1676 aa28.49■■■□□ 2.15
SNX22-205ENST00000560945 MVPQ14764 893 aaKnown RBP28.49■■■□□ 2.15
SNX22-205ENST00000560945 CCDC136Q96JN2 1154 aa28.49■■■□□ 2.15
SNX22-205ENST00000560945 TMOD3Q9NYL9 352 aa28.49■■■□□ 2.15
SNX22-205ENST00000560945 PIGBQ92521 554 aa28.48■■■□□ 2.15
SNX22-205ENST00000560945 PAPPAQ13219 1627 aa28.48■■■□□ 2.15
SNX22-205ENST00000560945 ANXA1P04083 346 aa28.48■■■□□ 2.15
SNX22-205ENST00000560945 CHPF2Q9P2E5 772 aa28.48■■■□□ 2.15
SNX22-205ENST00000560945 ATRNO75882 1429 aa28.47■■■□□ 2.15
SNX22-205ENST00000560945 ABCC4O15439 1325 aa28.46■■■□□ 2.15
SNX22-205ENST00000560945 MS4A1P11836 297 aa28.46■■■□□ 2.15
SNX22-205ENST00000560945 ITPRIPQ8IWB1 547 aa28.46■■■□□ 2.15
SNX22-205ENST00000560945 GJD4Q96KN9 370 aaPredicted RBP28.46■■■□□ 2.15
SNX22-205ENST00000560945 A0A0G2JS52 829 aa28.46■■■□□ 2.15
SNX22-205ENST00000560945 MYT1Q01538 1121 aa28.46■■■□□ 2.15
SNX22-205ENST00000560945 FMNL2Q96PY5 1086 aa28.46■■■□□ 2.15
SNX22-205ENST00000560945 API5Q9BZZ5 524 aaKnown RBP28.46■■■□□ 2.15
SNX22-205ENST00000560945 KCPQ6ZWJ8 1503 aa28.45■■■□□ 2.15
SNX22-205ENST00000560945 PHAXQ9H814 394 aaKnown RBP28.45■■■□□ 2.14
SNX22-205ENST00000560945 TRPC5Q9UL62 973 aaPredicted RBP28.45■■■□□ 2.14
SNX22-205ENST00000560945 DOT1LQ8TEK3 1739 aa28.44■■■□□ 2.14
SNX22-205ENST00000560945 ASAP1Q9ULH1 1129 aa28.44■■■□□ 2.14
SNX22-205ENST00000560945 ITGB4P16144 1822 aa28.44■■■□□ 2.14
SNX22-205ENST00000560945 FLIIQ13045 1269 aa28.43■■■□□ 2.14
SNX22-205ENST00000560945 PROSER3Q2NL68 480 aa28.43■■■□□ 2.14
SNX22-205ENST00000560945 SYTL4Q96C24 671 aaPredicted RBP28.43■■■□□ 2.14
SNX22-205ENST00000560945 ACSBG1Q96GR2 724 aa28.43■■■□□ 2.14
SNX22-205ENST00000560945 PTPRCP08575 1304 aa28.43■■■□□ 2.14
SNX22-205ENST00000560945 THSD7AQ9UPZ6 1657 aa28.43■■■□□ 2.14
SNX22-205ENST00000560945 PRIM1P49642 420 aaKnown RBP28.43■■■□□ 2.14
SNX22-205ENST00000560945 QTRT2Q9H974 415 aaKnown RBP28.43■■■□□ 2.14
SNX22-205ENST00000560945 USP16Q9Y5T5 823 aa28.43■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms