RNA–Protein interactions for RNA: ENST00000560834.1

CTDSPL2-210, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 571 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-210ENST00000560834 QTRT2Q9H974 415 aaKnown RBP9.38□□□□□ -0.91
CTDSPL2-210ENST00000560834 CIZ1Q9ULV3 898 aaPredicted RBP9.38□□□□□ -0.91
CTDSPL2-210ENST00000560834 CCDC9Q9Y3X0 531 aaKnown RBP9.38□□□□□ -0.91
CTDSPL2-210ENST00000560834 NHSQ6T4R5 1651 aa9.37□□□□□ -0.91
CTDSPL2-210ENST00000560834 IL2RBP14784 551 aa9.37□□□□□ -0.91
CTDSPL2-210ENST00000560834 PRKAR2BP31323 418 aa9.37□□□□□ -0.91
CTDSPL2-210ENST00000560834 FAM98CQ17RN3 349 aaKnown RBP9.37□□□□□ -0.91
CTDSPL2-210ENST00000560834 PLEKHF1Q96S99 279 aa9.37□□□□□ -0.91
CTDSPL2-210ENST00000560834 ADAMTS8Q9UP79 889 aa9.37□□□□□ -0.91
CTDSPL2-210ENST00000560834 SBF2Q86WG5 1849 aa9.37□□□□□ -0.91
CTDSPL2-210ENST00000560834 EP400Q96L91 3159 aa9.36□□□□□ -0.91
CTDSPL2-210ENST00000560834 MRC1P22897 1456 aa9.36□□□□□ -0.91
CTDSPL2-210ENST00000560834 PAPPAQ13219 1627 aa9.36□□□□□ -0.91
CTDSPL2-210ENST00000560834 FCHSD2O94868 740 aa9.36□□□□□ -0.91
CTDSPL2-210ENST00000560834 RBM6P78332 1123 aaKnown RBP9.36□□□□□ -0.91
CTDSPL2-210ENST00000560834 KDM6AO15550 1401 aaPredicted RBP9.35□□□□□ -0.91
CTDSPL2-210ENST00000560834 ONECUT3O60422 494 aaPredicted RBP9.35□□□□□ -0.91
CTDSPL2-210ENST00000560834 TATP17735 454 aaPredicted RBP9.35□□□□□ -0.91
CTDSPL2-210ENST00000560834 CCDC146Q8IYE0 955 aa9.35□□□□□ -0.91
CTDSPL2-210ENST00000560834 RAPGEF4Q8WZA2 1011 aa9.35□□□□□ -0.91
CTDSPL2-210ENST00000560834 CDCA7Q9BWT1 371 aaPredicted RBP9.35□□□□□ -0.91
CTDSPL2-210ENST00000560834 TNS1Q9HBL0 1735 aaKnown RBP9.35□□□□□ -0.91
CTDSPL2-210ENST00000560834 ITGB4P16144 1822 aa9.35□□□□□ -0.91
CTDSPL2-210ENST00000560834 ASTLQ6HA08 431 aaPredicted RBP9.34□□□□□ -0.91
CTDSPL2-210ENST00000560834 PAXIP1Q6ZW49 1069 aaPredicted RBP9.34□□□□□ -0.91
CTDSPL2-210ENST00000560834 FAM9BQ8IZU0 186 aa9.34□□□□□ -0.91
CTDSPL2-210ENST00000560834 PHACTR3Q96KR7 559 aa9.34□□□□□ -0.91
CTDSPL2-210ENST00000560834 PCDH11XQ9BZA7 1347 aa9.33□□□□□ -0.92
CTDSPL2-210ENST00000560834 PCDH11YQ9BZA8 1340 aa9.33□□□□□ -0.92
CTDSPL2-210ENST00000560834 RXRBP28702 533 aa9.33□□□□□ -0.92
CTDSPL2-210ENST00000560834 MTHFSDQ2M296 383 aaKnown RBP9.33□□□□□ -0.92
CTDSPL2-210ENST00000560834 RUNDC1Q96C34 613 aa9.33□□□□□ -0.92
CTDSPL2-210ENST00000560834 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.33□□□□□ -0.921e-7■■■□□ 16.9
CTDSPL2-210ENST00000560834 MAP3K5Q99683 1374 aa9.33□□□□□ -0.92
CTDSPL2-210ENST00000560834 MAPK8IP3Q9UPT6 1336 aa9.32□□□□□ -0.92
CTDSPL2-210ENST00000560834 KDM3BQ7LBC6 1761 aa9.32□□□□□ -0.92
CTDSPL2-210ENST00000560834 BCL9O00512 1426 aa9.32□□□□□ -0.92
CTDSPL2-210ENST00000560834 CYP27B1O15528 508 aa9.32□□□□□ -0.92
CTDSPL2-210ENST00000560834 DDB1Q16531 1140 aa9.32□□□□□ -0.92
CTDSPL2-210ENST00000560834 AMOTQ4VCS5 1084 aa9.32□□□□□ -0.92
CTDSPL2-210ENST00000560834 SEPT12Q8IYM1 358 aa9.32□□□□□ -0.92
CTDSPL2-210ENST00000560834 ZCRB1Q8TBF4 217 aaKnown RBP9.32□□□□□ -0.92
CTDSPL2-210ENST00000560834 UBR2Q8IWV8 1755 aa9.32□□□□□ -0.92
CTDSPL2-210ENST00000560834 BTAF1O14981 1849 aa9.31□□□□□ -0.92
CTDSPL2-210ENST00000560834 PHKG2P15735 406 aa9.31□□□□□ -0.92
CTDSPL2-210ENST00000560834 NFE2L2Q16236 605 aa9.31□□□□□ -0.92
CTDSPL2-210ENST00000560834 PLEKHO1Q53GL0 409 aaPredicted RBP9.31□□□□□ -0.92
CTDSPL2-210ENST00000560834 ZNF530Q6P9A1 599 aaPredicted RBP9.31□□□□□ -0.92
CTDSPL2-210ENST00000560834 MARCH10Q8NA82 808 aaPredicted RBP9.31□□□□□ -0.92
CTDSPL2-210ENST00000560834 GAS2L2Q8NHY3 880 aa9.31□□□□□ -0.92
CTDSPL2-210ENST00000560834 CFAP44Q96MT7 982 aa9.31□□□□□ -0.92
CTDSPL2-210ENST00000560834 PNNQ9H307 717 aaKnown RBP9.31□□□□□ -0.92
CTDSPL2-210ENST00000560834 SPG7Q9UQ90 795 aa9.31□□□□□ -0.92
CTDSPL2-210ENST00000560834 CEMIPQ8WUJ3 1361 aa9.3□□□□□ -0.92
CTDSPL2-210ENST00000560834 A0A0G2JS52 829 aa9.3□□□□□ -0.92
CTDSPL2-210ENST00000560834 TMPOP42166 694 aaKnown RBP9.3□□□□□ -0.92
CTDSPL2-210ENST00000560834 MYT1Q01538 1121 aa9.3□□□□□ -0.92
CTDSPL2-210ENST00000560834 PHF12Q96QT6 1004 aa9.3□□□□□ -0.92
CTDSPL2-210ENST00000560834 RGPD3A6NKT7 1758 aaPredicted RBP9.29□□□□□ -0.92
CTDSPL2-210ENST00000560834 RGPD4Q7Z3J3 1758 aa9.29□□□□□ -0.92
CTDSPL2-210ENST00000560834 EXOC5O00471 708 aa9.29□□□□□ -0.92
CTDSPL2-210ENST00000560834 APAF1O14727 1248 aa9.29□□□□□ -0.92
CTDSPL2-210ENST00000560834 ATMINO43313 823 aaPredicted RBP9.29□□□□□ -0.92
CTDSPL2-210ENST00000560834 GSE1Q14687 1217 aa9.29□□□□□ -0.92
CTDSPL2-210ENST00000560834 NKX1-1Q15270 411 aaPredicted RBP9.29□□□□□ -0.92
CTDSPL2-210ENST00000560834 AKAP4Q5JQC9 854 aa9.29□□□□□ -0.92
CTDSPL2-210ENST00000560834 SPRYD3Q8NCJ5 442 aa9.29□□□□□ -0.92
CTDSPL2-210ENST00000560834 RRP7AQ9Y3A4 280 aaKnown RBP9.29□□□□□ -0.92
CTDSPL2-210ENST00000560834 CICQ96RK0 1608 aaPredicted RBP9.29□□□□□ -0.92
CTDSPL2-210ENST00000560834 LY75O60449 1722 aa9.28□□□□□ -0.92
CTDSPL2-210ENST00000560834 SENP3-EIF4A1A0A087X0R7 540 aa9.28□□□□□ -0.92
CTDSPL2-210ENST00000560834 NEFMP07197 916 aa9.28□□□□□ -0.92
CTDSPL2-210ENST00000560834 NUBP1P53384 320 aa9.28□□□□□ -0.92
CTDSPL2-210ENST00000560834 C1orf141Q5JVX7 400 aa9.28□□□□□ -0.92
CTDSPL2-210ENST00000560834 KRT27Q7Z3Y8 459 aa9.28□□□□□ -0.92
CTDSPL2-210ENST00000560834 IFNL2Q8IZJ0 200 aa9.28□□□□□ -0.92
CTDSPL2-210ENST00000560834 DDX54Q8TDD1 881 aaKnown RBP9.28□□□□□ -0.92
CTDSPL2-210ENST00000560834 TRIM35Q9UPQ4 493 aa9.28□□□□□ -0.92
CTDSPL2-210ENST00000560834 C5P01031 1676 aa9.27□□□□□ -0.93
CTDSPL2-210ENST00000560834 GNAT3A8MTJ3 354 aa9.27□□□□□ -0.93
CTDSPL2-210ENST00000560834 FAM182BQ5T319 152 aa9.27□□□□□ -0.93
CTDSPL2-210ENST00000560834 ZNF521Q96K83 1311 aa9.27□□□□□ -0.93
CTDSPL2-210ENST00000560834 LAMB4A4D0S4 1761 aa9.27□□□□□ -0.93
CTDSPL2-210ENST00000560834 ZNF831Q5JPB2 1677 aa9.26□□□□□ -0.93
CTDSPL2-210ENST00000560834 KCPQ6ZWJ8 1503 aa9.26□□□□□ -0.93
CTDSPL2-210ENST00000560834 TJP1Q07157 1748 aa9.26□□□□□ -0.93
CTDSPL2-210ENST00000560834 RNMTO43148 476 aaKnown RBP9.26□□□□□ -0.93
CTDSPL2-210ENST00000560834 RIPK4P57078 832 aa9.26□□□□□ -0.93
CTDSPL2-210ENST00000560834 PDE3BQ13370 1112 aa9.26□□□□□ -0.93
CTDSPL2-210ENST00000560834 DCTN1Q14203 1278 aa9.26□□□□□ -0.93
CTDSPL2-210ENST00000560834 CCDC27Q2M243 656 aa9.26□□□□□ -0.93
CTDSPL2-210ENST00000560834 HS6ST3Q8IZP7 471 aa9.26□□□□□ -0.93
CTDSPL2-210ENST00000560834 DCAF5Q96JK2 942 aa9.26□□□□□ -0.93
CTDSPL2-210ENST00000560834 RREB1Q92766 1687 aa9.26□□□□□ -0.93
CTDSPL2-210ENST00000560834 HTATSF1O43719 755 aaKnown RBP9.25□□□□□ -0.93
CTDSPL2-210ENST00000560834 HSP90AB1P08238 724 aaKnown RBP9.25□□□□□ -0.93
CTDSPL2-210ENST00000560834 LMOD3Q0VAK6 560 aa9.25□□□□□ -0.93
CTDSPL2-210ENST00000560834 NEUROD2Q15784 382 aa9.25□□□□□ -0.93
CTDSPL2-210ENST00000560834 MPRIPQ6WCQ1 1025 aa9.25□□□□□ -0.93
CTDSPL2-210ENST00000560834 MCM10Q7L590 875 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms