RNA–Protein interactions for RNA: ENST00000560825.5

GABPB1-210, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-210ENST00000560825 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.3■□□□□ 0.04
GABPB1-210ENST00000560825 MTHFSP49914 203 aa15.29■□□□□ 0.04
GABPB1-210ENST00000560825 SULT6B1Q6IMI4 303 aa15.29■□□□□ 0.04
GABPB1-210ENST00000560825 IFNL2Q8IZJ0 200 aa15.29■□□□□ 0.04
GABPB1-210ENST00000560825 ATG3Q9NT62 314 aa15.29■□□□□ 0.04
GABPB1-210ENST00000560825 KDRP35968 1356 aa15.29■□□□□ 0.04
GABPB1-210ENST00000560825 C4AP0C0L4 1744 aa15.28■□□□□ 0.04
GABPB1-210ENST00000560825 ZNF831Q5JPB2 1677 aa15.28■□□□□ 0.04
GABPB1-210ENST00000560825 NLGN2Q8NFZ4 835 aa15.28■□□□□ 0.04
GABPB1-210ENST00000560825 TMOD3Q9NYL9 352 aa15.27■□□□□ 0.04
GABPB1-210ENST00000560825 ADAMTS7Q9UKP4 1686 aa15.27■□□□□ 0.03
GABPB1-210ENST00000560825 CHD4Q14839 1912 aa15.27■□□□□ 0.03
GABPB1-210ENST00000560825 LOC102724428A0A0B4J2F2 783 aa15.26■□□□□ 0.03
GABPB1-210ENST00000560825 HMOX1P09601 288 aa15.26■□□□□ 0.03
GABPB1-210ENST00000560825 SIK1P57059 783 aa15.26■□□□□ 0.03
GABPB1-210ENST00000560825 ZNF530Q6P9A1 599 aaPredicted RBP15.26■□□□□ 0.03
GABPB1-210ENST00000560825 KLHL34Q8N239 644 aa15.26■□□□□ 0.03
GABPB1-210ENST00000560825 PHF14O94880 888 aa15.25■□□□□ 0.03
GABPB1-210ENST00000560825 MAP3K5Q99683 1374 aa15.24■□□□□ 0.03
GABPB1-210ENST00000560825 SLC16A10Q8TF71 515 aa15.24■□□□□ 0.03
GABPB1-210ENST00000560825 KIAA1551Q9HCM1 1747 aa15.24■□□□□ 0.03
GABPB1-210ENST00000560825 SIPA1L3O60292 1781 aaPredicted RBP15.23■□□□□ 0.03
GABPB1-210ENST00000560825 YY1P25490 414 aa15.23■□□□□ 0.03
GABPB1-210ENST00000560825 SMARCC1Q92922 1105 aaPredicted RBP15.23■□□□□ 0.03
GABPB1-210ENST00000560825 LGR6Q9HBX8 967 aa15.23■□□□□ 0.03
GABPB1-210ENST00000560825 CICQ96RK0 1608 aaPredicted RBP15.23■□□□□ 0.03
GABPB1-210ENST00000560825 ATP6V1AP38606 617 aa15.22■□□□□ 0.03
GABPB1-210ENST00000560825 PLEKHO1Q53GL0 409 aaPredicted RBP15.22■□□□□ 0.03
GABPB1-210ENST00000560825 DCAF5Q96JK2 942 aa15.22■□□□□ 0.03
GABPB1-210ENST00000560825 PLEKHG2Q9H7P9 1386 aa15.22■□□□□ 0.03
GABPB1-210ENST00000560825 UBR2Q8IWV8 1755 aa15.21■□□□□ 0.03
GABPB1-210ENST00000560825 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.21■□□□□ 0.03
GABPB1-210ENST00000560825 NFATC2IPQ8NCF5 419 aa15.21■□□□□ 0.03
GABPB1-210ENST00000560825 N4BP2Q86UW6 1770 aaPredicted RBP15.21■□□□□ 0.02
GABPB1-210ENST00000560825 ERVV-2B6SEH9 535 aa15.2■□□□□ 0.02
GABPB1-210ENST00000560825 AK7Q96M32 723 aa15.2■□□□□ 0.02
GABPB1-210ENST00000560825 MRC1P22897 1456 aa15.2■□□□□ 0.02
GABPB1-210ENST00000560825 KCPQ6ZWJ8 1503 aa15.19■□□□□ 0.02
GABPB1-210ENST00000560825 GNPATO15228 680 aa15.19■□□□□ 0.02
GABPB1-210ENST00000560825 MTHFSDQ2M296 383 aaKnown RBP15.19■□□□□ 0.02
GABPB1-210ENST00000560825 RBM42Q9BTD8 480 aaKnown RBP15.19■□□□□ 0.02
GABPB1-210ENST00000560825 NPC1L1Q9UHC9 1359 aa15.19■□□□□ 0.02
GABPB1-210ENST00000560825 PTCD1O75127 700 aaKnown RBP15.18■□□□□ 0.02
GABPB1-210ENST00000560825 YBX3P16989 372 aaKnown RBP eCLIP15.18■□□□□ 0.021e-6■□□□□ 11.3
GABPB1-210ENST00000560825 POLD1P28340 1107 aa15.18■□□□□ 0.02
GABPB1-210ENST00000560825 CABP4P57796 275 aa15.18■□□□□ 0.02
GABPB1-210ENST00000560825 AMOTQ4VCS5 1084 aa15.18■□□□□ 0.02
GABPB1-210ENST00000560825 KIF13BQ9NQT8 1826 aa15.18■□□□□ 0.02
GABPB1-210ENST00000560825 DIAPH1O60610 1272 aaKnown RBP15.17■□□□□ 0.02
GABPB1-210ENST00000560825 WWC3Q9ULE0 1092 aa15.17■□□□□ 0.02
GABPB1-210ENST00000560825 SLC39A6Q13433 755 aa15.16■□□□□ 0.02
GABPB1-210ENST00000560825 C1orf141Q5JVX7 400 aa15.16■□□□□ 0.02
GABPB1-210ENST00000560825 PELP1Q8IZL8 1130 aaKnown RBP15.16■□□□□ 0.02
GABPB1-210ENST00000560825 HSP90AB1P08238 724 aaKnown RBP15.15■□□□□ 0.02
GABPB1-210ENST00000560825 SSFA2P28290 1259 aa15.15■□□□□ 0.02
GABPB1-210ENST00000560825 AKAP4Q5JQC9 854 aa15.15■□□□□ 0.02
GABPB1-210ENST00000560825 DLG5Q8TDM6 1919 aa15.15■□□□□ 0.02
GABPB1-210ENST00000560825 U2SURPO15042 1029 aaKnown RBP15.14■□□□□ 0.01
GABPB1-210ENST00000560825 RNMTO43148 476 aaKnown RBP15.14■□□□□ 0.01
GABPB1-210ENST00000560825 PHACTR3Q96KR7 559 aa15.14■□□□□ 0.01
GABPB1-210ENST00000560825 BRCA1P38398 1863 aaKnown RBP15.14■□□□□ 0.01
GABPB1-210ENST00000560825 GPR162Q16538 588 aa15.13■□□□□ 0.01
GABPB1-210ENST00000560825 ARHGEF1Q92888 912 aaKnown RBP15.13■□□□□ 0.01
GABPB1-210ENST00000560825 SLC52A2Q9HAB3 445 aa15.13■□□□□ 0.01
GABPB1-210ENST00000560825 PPP2R1AP30153 589 aa15.12■□□□□ 0.01
GABPB1-210ENST00000560825 FLAD1Q8NFF5 587 aa15.12■□□□□ 0.01
GABPB1-210ENST00000560825 SRP68Q9UHB9 627 aaKnown RBP15.12■□□□□ 0.01
GABPB1-210ENST00000560825 AFDNP55196 1824 aaKnown RBP15.11■□□□□ 0.01
GABPB1-210ENST00000560825 CRKLP46109 303 aaKnown RBP15.11■□□□□ 0.01
GABPB1-210ENST00000560825 INTS5Q6P9B9 1019 aaKnown RBP15.11■□□□□ 0.01
GABPB1-210ENST00000560825 DNAJC10Q8IXB1 793 aa15.11■□□□□ 0.01
GABPB1-210ENST00000560825 ZNF784Q8NCA9 323 aaPredicted RBP15.11■□□□□ 0.01
GABPB1-210ENST00000560825 CNTNAP4Q9C0A0 1308 aa15.11■□□□□ 0.01
GABPB1-210ENST00000560825 NCBP3Q53F19 620 aaKnown RBP15.1■□□□□ 0.01
GABPB1-210ENST00000560825 IL17REQ8NFR9 667 aa15.1■□□□□ 0.01
GABPB1-210ENST00000560825 RSPH6AQ9H0K4 717 aa15.1■□□□□ 0.01
GABPB1-210ENST00000560825 MMP10P09238 476 aa15.09■□□□□ 0.01
GABPB1-210ENST00000560825 GYS1P13807 737 aa15.09■□□□□ 0.01
GABPB1-210ENST00000560825 RC3H1Q5TC82 1133 aaKnown RBP15.09■□□□□ 0.01
GABPB1-210ENST00000560825 RTCBQ9Y3I0 505 aaKnown RBP15.09■□□□□ 0.01
GABPB1-210ENST00000560825 RPS6KA4O75676 772 aa15.09■□□□□ 0.01
GABPB1-210ENST00000560825 TRAPPC3LQ5T215 181 aa15.09■□□□□ 0.01
GABPB1-210ENST00000560825 PXDNLA1KZ92 1463 aa15.08■□□□□ 0
GABPB1-210ENST00000560825 PRKAR2BP31323 418 aa15.08■□□□□ 0
GABPB1-210ENST00000560825 CD2APQ9Y5K6 639 aa15.08■□□□□ 0
GABPB1-210ENST00000560825 KCNQ3O43525 872 aa15.07■□□□□ 0
GABPB1-210ENST00000560825 CYP19A1P11511 503 aaPredicted RBP15.07■□□□□ 0
GABPB1-210ENST00000560825 FKBP8Q14318 412 aa15.07■□□□□ 0
GABPB1-210ENST00000560825 C10orf71Q711Q0 1435 aa15.06■□□□□ 0
GABPB1-210ENST00000560825 NRXN2Q9P2S2 1712 aa15.05■□□□□ 0
GABPB1-210ENST00000560825 DDR1Q08345 913 aa15.05■□□□□ -0
GABPB1-210ENST00000560825 ZBTB1Q9Y2K1 713 aa15.05■□□□□ -0
GABPB1-210ENST00000560825 CEMIPQ8WUJ3 1361 aa15.04■□□□□ -0
GABPB1-210ENST00000560825 SOS1Q07889 1333 aaPredicted RBP15.04■□□□□ -0
GABPB1-210ENST00000560825 USP42Q9H9J4 1324 aaKnown RBP15.04■□□□□ -0
GABPB1-210ENST00000560825 SCN7AQ01118 1682 aa15.04■□□□□ -0
GABPB1-210ENST00000560825 A0A0G2JLW4 131 aa15.03■□□□□ -0
GABPB1-210ENST00000560825 PRAMEF22A3QJZ6 481 aa15.03■□□□□ -0
GABPB1-210ENST00000560825 GNAT3A8MTJ3 354 aa15.03■□□□□ -0
GABPB1-210ENST00000560825 RFC4P35249 363 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms