RNA–Protein interactions for RNA: ENST00000560726.5

ETFA-216, Transcript of electron transfer flavoprotein subunit alpha, humanhuman

TSL 3 BASIC

Gene ETFA, Length 942 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ETFA-216ENST00000560726 PPP1R1BQ9UD71 204 aaPredicted RBP24.99■■□□□ 1.59
ETFA-216ENST00000560726 SCN11AQ9UI33 1791 aa24.99■■□□□ 1.59
ETFA-216ENST00000560726 ITPK1Q13572 414 aa24.98■■□□□ 1.59
ETFA-216ENST00000560726 ANP32CO43423 234 aa24.97■■□□□ 1.59
ETFA-216ENST00000560726 LINC00116Q8NCU8 138 aa24.97■■□□□ 1.59
ETFA-216ENST00000560726 SGIP1Q9BQI5 828 aa24.97■■□□□ 1.59
ETFA-216ENST00000560726 NUDCQ9Y266 331 aa24.97■■□□□ 1.59
ETFA-216ENST00000560726 C4BP0C0L5 1744 aa24.97■■□□□ 1.59
ETFA-216ENST00000560726 ATP6V1AP38606 617 aa24.96■■□□□ 1.59
ETFA-216ENST00000560726 COL23A1Q86Y22 540 aaPredicted RBP24.96■■□□□ 1.59
ETFA-216ENST00000560726 SLC4A9Q96Q91 983 aa24.96■■□□□ 1.59
ETFA-216ENST00000560726 RSPH6AQ9H0K4 717 aa24.96■■□□□ 1.59
ETFA-216ENST00000560726 RNMTO43148 476 aaKnown RBP24.95■■□□□ 1.58
ETFA-216ENST00000560726 AMIGO3Q86WK7 504 aa24.95■■□□□ 1.58
ETFA-216ENST00000560726 U2AF1L5P0DN76 240 aaPredicted RBP24.94■■□□□ 1.58
ETFA-216ENST00000560726 PRKAR2BP31323 418 aa24.94■■□□□ 1.58
ETFA-216ENST00000560726 U2AF1Q01081 240 aaKnown RBP eCLIP24.94■■□□□ 1.58
ETFA-216ENST00000560726 SLC16A10Q8TF71 515 aa24.94■■□□□ 1.58
ETFA-216ENST00000560726 PHACTR3Q96KR7 559 aa24.94■■□□□ 1.58
ETFA-216ENST00000560726 RBM42Q9BTD8 480 aaKnown RBP24.94■■□□□ 1.58
ETFA-216ENST00000560726 HMGB2P26583 209 aaKnown RBP24.93■■□□□ 1.58
ETFA-216ENST00000560726 SMIM5Q71RC9 77 aa24.93■■□□□ 1.58
ETFA-216ENST00000560726 AK7Q96M32 723 aa24.93■■□□□ 1.58
ETFA-216ENST00000560726 SLC52A2Q9HAB3 445 aa24.93■■□□□ 1.58
ETFA-216ENST00000560726 VIRMAQ69YN4 1812 aaKnown RBP24.93■■□□□ 1.58
ETFA-216ENST00000560726 ADAMTS7Q9UKP4 1686 aa24.92■■□□□ 1.58
ETFA-216ENST00000560726 MSH5O43196 834 aa24.92■■□□□ 1.58
ETFA-216ENST00000560726 GAS2L2Q8NHY3 880 aa24.91■■□□□ 1.58
ETFA-216ENST00000560726 MRC1P22897 1456 aa24.9■■□□□ 1.58
ETFA-216ENST00000560726 PTCD1O75127 700 aaKnown RBP24.9■■□□□ 1.58
ETFA-216ENST00000560726 UBR3Q6ZT12 1888 aa24.89■■□□□ 1.58
ETFA-216ENST00000560726 MAP3K5Q99683 1374 aa24.89■■□□□ 1.57
ETFA-216ENST00000560726 ZNF831Q5JPB2 1677 aa24.88■■□□□ 1.57
ETFA-216ENST00000560726 GNAT3A8MTJ3 354 aa24.88■■□□□ 1.57
ETFA-216ENST00000560726 FCHSD2O94868 740 aa24.88■■□□□ 1.57
ETFA-216ENST00000560726 PHF14O94880 888 aa24.88■■□□□ 1.57
ETFA-216ENST00000560726 DIEXFQ68CQ4 756 aaKnown RBP24.88■■□□□ 1.57
ETFA-216ENST00000560726 COL24A1Q17RW2 1714 aa24.88■■□□□ 1.57
ETFA-216ENST00000560726 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.87■■□□□ 1.57
ETFA-216ENST00000560726 FLAD1Q8NFF5 587 aa24.87■■□□□ 1.57
ETFA-216ENST00000560726 IL17REQ8NFR9 667 aa24.87■■□□□ 1.57
ETFA-216ENST00000560726 ARXQ96QS3 562 aa24.87■■□□□ 1.57
ETFA-216ENST00000560726 GNPATO15228 680 aa24.86■■□□□ 1.57
ETFA-216ENST00000560726 SLC39A6Q13433 755 aa24.86■■□□□ 1.57
ETFA-216ENST00000560726 MSL1Q68DK7 614 aa24.85■■□□□ 1.57
ETFA-216ENST00000560726 FHDC1Q9C0D6 1143 aaPredicted RBP24.85■■□□□ 1.57
ETFA-216ENST00000560726 COL5A3P25940 1745 aaPredicted RBP24.84■■□□□ 1.57
ETFA-216ENST00000560726 SSFA2P28290 1259 aa24.83■■□□□ 1.57
ETFA-216ENST00000560726 POLD1P28340 1107 aa24.83■■□□□ 1.57
ETFA-216ENST00000560726 CCDC184Q52MB2 194 aa24.82■■□□□ 1.56
ETFA-216ENST00000560726 TJP1Q07157 1748 aa24.81■■□□□ 1.56
ETFA-216ENST00000560726 RC3H1Q5TC82 1133 aaKnown RBP24.81■■□□□ 1.56
ETFA-216ENST00000560726 SYT17Q9BSW7 474 aa24.81■■□□□ 1.56
ETFA-216ENST00000560726 CNTNAP4Q9C0A0 1308 aa24.81■■□□□ 1.56
ETFA-216ENST00000560726 MYH14Q7Z406 1995 aaKnown RBP24.8■■□□□ 1.56
ETFA-216ENST00000560726 TEFQ10587 303 aa24.8■■□□□ 1.56
ETFA-216ENST00000560726 KCPQ6ZWJ8 1503 aa24.8■■□□□ 1.56
ETFA-216ENST00000560726 CEMIPQ8WUJ3 1361 aa24.8■■□□□ 1.56
ETFA-216ENST00000560726 RTCBQ9Y3I0 505 aaKnown RBP24.79■■□□□ 1.56
ETFA-216ENST00000560726 SIPA1L3O60292 1781 aaPredicted RBP24.78■■□□□ 1.56
ETFA-216ENST00000560726 CRKLP46109 303 aaKnown RBP24.78■■□□□ 1.56
ETFA-216ENST00000560726 DNAJC10Q8IXB1 793 aa24.78■■□□□ 1.56
ETFA-216ENST00000560726 CICQ96RK0 1608 aaPredicted RBP24.78■■□□□ 1.56
ETFA-216ENST00000560726 PLEKHF1Q96S99 279 aa24.77■■□□□ 1.56
ETFA-216ENST00000560726 RPS6KA4O75676 772 aa24.76■■□□□ 1.55
ETFA-216ENST00000560726 MCM10Q7L590 875 aa24.76■■□□□ 1.55
ETFA-216ENST00000560726 UBR2Q8IWV8 1755 aa24.75■■□□□ 1.55
ETFA-216ENST00000560726 DCTN1Q14203 1278 aa24.75■■□□□ 1.55
ETFA-216ENST00000560726 TRAPPC3LQ5T215 181 aa24.75■■□□□ 1.55
ETFA-216ENST00000560726 KLHL34Q8N239 644 aa24.75■■□□□ 1.55
ETFA-216ENST00000560726 INTS5Q6P9B9 1019 aaKnown RBP24.74■■□□□ 1.55
ETFA-216ENST00000560726 RTF1Q92541 710 aaKnown RBP24.74■■□□□ 1.55
ETFA-216ENST00000560726 ARHGEF1Q92888 912 aaKnown RBP24.74■■□□□ 1.55
ETFA-216ENST00000560726 ZNF790Q6PG37 636 aa24.73■■□□□ 1.55
ETFA-216ENST00000560726 TTC5Q8N0Z6 440 aa24.73■■□□□ 1.55
ETFA-216ENST00000560726 CCER2I3L3R5 266 aa24.72■■□□□ 1.55
ETFA-216ENST00000560726 CYP19A1P11511 503 aaPredicted RBP24.72■■□□□ 1.55
ETFA-216ENST00000560726 ADRA2BP18089 450 aa24.72■■□□□ 1.55
ETFA-216ENST00000560726 MRS2Q9HD23 443 aa24.72■■□□□ 1.55
ETFA-216ENST00000560726 KCNQ3O43525 872 aa24.71■■□□□ 1.55
ETFA-216ENST00000560726 HTATSF1O43719 755 aaKnown RBP24.71■■□□□ 1.55
ETFA-216ENST00000560726 VSIG10Q8N0Z9 540 aa24.71■■□□□ 1.55
ETFA-216ENST00000560726 PNISRQ8TF01 805 aaKnown RBP24.71■■□□□ 1.55
ETFA-216ENST00000560726 ZNF496Q96IT1 587 aaPredicted RBP24.71■■□□□ 1.55
ETFA-216ENST00000560726 BTBD11A6QL63 1104 aa24.7■■□□□ 1.54
ETFA-216ENST00000560726 NEFMP07197 916 aa24.7■■□□□ 1.54
ETFA-216ENST00000560726 CCDC87Q9NVE4 849 aa24.7■■□□□ 1.54
ETFA-216ENST00000560726 DLG5Q8TDM6 1919 aa24.69■■□□□ 1.54
ETFA-216ENST00000560726 RFC4P35249 363 aa24.69■■□□□ 1.54
ETFA-216ENST00000560726 ADAMTS8Q9UP79 889 aa24.69■■□□□ 1.54
ETFA-216ENST00000560726 C4AP0C0L4 1744 aa24.69■■□□□ 1.54
ETFA-216ENST00000560726 WDR43Q15061 677 aaKnown RBP eCLIP24.68■■□□□ 1.54
ETFA-216ENST00000560726 NFE2L2Q16236 605 aa24.68■■□□□ 1.54
ETFA-216ENST00000560726 MIER1Q8N108 512 aa24.68■■□□□ 1.54
ETFA-216ENST00000560726 NLGN2Q8NFZ4 835 aa24.68■■□□□ 1.54
ETFA-216ENST00000560726 HEG1Q9ULI3 1381 aa24.67■■□□□ 1.54
ETFA-216ENST00000560726 UTRNP46939 3433 aa24.67■■□□□ 1.54
ETFA-216ENST00000560726 GYS1P13807 737 aa24.67■■□□□ 1.54
ETFA-216ENST00000560726 PNNQ9H307 717 aaKnown RBP24.67■■□□□ 1.54
ETFA-216ENST00000560726 MAPK8IP3Q9UPT6 1336 aa24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms