RNA–Protein interactions for RNA: ENST00000560673.1

KNSTRN-211, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 2

Gene KNSTRN, Length 623 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-211ENST00000560673 WBP1LQ9NX94 342 aa16.39■□□□□ 0.21
KNSTRN-211ENST00000560673 CGNL1Q0VF96 1302 aa16.39■□□□□ 0.21
KNSTRN-211ENST00000560673 PDE4DIPQ5VU43 2346 aa16.39■□□□□ 0.21
KNSTRN-211ENST00000560673 PARP3Q9Y6F1 533 aa16.38■□□□□ 0.21
KNSTRN-211ENST00000560673 SBF1O95248 1867 aa16.37■□□□□ 0.21
KNSTRN-211ENST00000560673 LOC102724428A0A0B4J2F2 783 aa16.36■□□□□ 0.21
KNSTRN-211ENST00000560673 SIK1P57059 783 aa16.36■□□□□ 0.21
KNSTRN-211ENST00000560673 HSPA8P11142 646 aaKnown RBP16.35■□□□□ 0.21
KNSTRN-211ENST00000560673 LMNB1P20700 586 aa16.35■□□□□ 0.21
KNSTRN-211ENST00000560673 VEGFBP49765 207 aa16.35■□□□□ 0.21
KNSTRN-211ENST00000560673 TRAPPC3LQ5T215 181 aa16.35■□□□□ 0.21
KNSTRN-211ENST00000560673 CHADLQ6NUI6 762 aa16.35■□□□□ 0.21
KNSTRN-211ENST00000560673 RAPGEF4Q8WZA2 1011 aa16.35■□□□□ 0.21
KNSTRN-211ENST00000560673 PCDH11XQ9BZA7 1347 aa16.35■□□□□ 0.21
KNSTRN-211ENST00000560673 PCDH11YQ9BZA8 1340 aa16.35■□□□□ 0.21
KNSTRN-211ENST00000560673 C4AP0C0L4 1744 aa16.34■□□□□ 0.21
KNSTRN-211ENST00000560673 RASSF7Q02833 373 aa16.34■□□□□ 0.21
KNSTRN-211ENST00000560673 KDM6AO15550 1401 aaPredicted RBP16.34■□□□□ 0.21
KNSTRN-211ENST00000560673 MON2Q7Z3U7 1717 aa16.33■□□□□ 0.21
KNSTRN-211ENST00000560673 RTCBQ9Y3I0 505 aaKnown RBP16.33■□□□□ 0.2
KNSTRN-211ENST00000560673 POTECB2RU33 542 aa16.32■□□□□ 0.2
KNSTRN-211ENST00000560673 PIGBQ92521 554 aa16.32■□□□□ 0.2
KNSTRN-211ENST00000560673 CFAP44Q96MT7 982 aa16.32■□□□□ 0.2
KNSTRN-211ENST00000560673 SBNO2Q9Y2G9 1366 aa16.32■□□□□ 0.2
KNSTRN-211ENST00000560673 TATP17735 454 aaPredicted RBP16.31■□□□□ 0.2
KNSTRN-211ENST00000560673 HOXC9P31274 260 aa16.31■□□□□ 0.2
KNSTRN-211ENST00000560673 ATP6V1AP38606 617 aa16.31■□□□□ 0.2
KNSTRN-211ENST00000560673 AMPHP49418 695 aa16.31■□□□□ 0.2
KNSTRN-211ENST00000560673 ITPK1Q13572 414 aa16.31■□□□□ 0.2
KNSTRN-211ENST00000560673 DPY19L2Q6NUT2 758 aa16.31■□□□□ 0.2
KNSTRN-211ENST00000560673 GYS1P13807 737 aa16.3■□□□□ 0.2
KNSTRN-211ENST00000560673 CHRNA5P30532 468 aa16.3■□□□□ 0.2
KNSTRN-211ENST00000560673 NBPF6Q5VWK0 638 aa16.3■□□□□ 0.2
KNSTRN-211ENST00000560673 NBPF4Q96M43 638 aa16.3■□□□□ 0.2
KNSTRN-211ENST00000560673 CD163L1Q9NR16 1453 aa16.29■□□□□ 0.2
KNSTRN-211ENST00000560673 RFC4P35249 363 aa16.29■□□□□ 0.2
KNSTRN-211ENST00000560673 MAP2K1Q02750 393 aaPredicted RBP16.29■□□□□ 0.2
KNSTRN-211ENST00000560673 USHBP1Q8N6Y0 703 aa16.29■□□□□ 0.2
KNSTRN-211ENST00000560673 MAP2P11137 1827 aaKnown RBP16.29■□□□□ 0.2
KNSTRN-211ENST00000560673 RGPD2P0DJD1 1756 aa16.28■□□□□ 0.2
KNSTRN-211ENST00000560673 MAP3K19Q56UN5 1328 aa16.28■□□□□ 0.2
KNSTRN-211ENST00000560673 ARHGEF1Q92888 912 aaKnown RBP16.28■□□□□ 0.2
KNSTRN-211ENST00000560673 ITGB4P16144 1822 aa16.27■□□□□ 0.2
KNSTRN-211ENST00000560673 TMEM88BA6NKF7 163 aa16.27■□□□□ 0.2
KNSTRN-211ENST00000560673 CYP27B1O15528 508 aa16.27■□□□□ 0.2
KNSTRN-211ENST00000560673 HDGFL2Q7Z4V5 671 aaPredicted RBP16.27■□□□□ 0.2
KNSTRN-211ENST00000560673 PASKQ96RG2 1323 aa16.26■□□□□ 0.19
KNSTRN-211ENST00000560673 VIRMAQ69YN4 1812 aaKnown RBP16.25■□□□□ 0.19
KNSTRN-211ENST00000560673 POTEIP0CG38 1075 aa16.25■□□□□ 0.19
KNSTRN-211ENST00000560673 POTEJP0CG39 1038 aa16.25■□□□□ 0.19
KNSTRN-211ENST00000560673 EDC4Q6P2E9 1401 aaKnown RBP16.25■□□□□ 0.19
KNSTRN-211ENST00000560673 TIAM2Q8IVF5 1701 aa16.25■□□□□ 0.19
KNSTRN-211ENST00000560673 TMOD3Q9NYL9 352 aa16.24■□□□□ 0.19
KNSTRN-211ENST00000560673 ASAP1Q9ULH1 1129 aa16.24■□□□□ 0.19
KNSTRN-211ENST00000560673 TMC1Q8TDI8 760 aa16.23■□□□□ 0.19
KNSTRN-211ENST00000560673 SMG6Q86US8 1419 aaKnown RBP16.22■□□□□ 0.19
KNSTRN-211ENST00000560673 DEFB115Q30KQ5 88 aa16.22■□□□□ 0.19
KNSTRN-211ENST00000560673 BEGAINQ9BUH8 593 aa16.22■□□□□ 0.19
KNSTRN-211ENST00000560673 RAB3GAP2Q9H2M9 1393 aa16.22■□□□□ 0.19
KNSTRN-211ENST00000560673 RASSF10A6NK89 507 aa16.21■□□□□ 0.19
KNSTRN-211ENST00000560673 NKX1-1Q15270 411 aaPredicted RBP16.21■□□□□ 0.19
KNSTRN-211ENST00000560673 RC3H1Q5TC82 1133 aaKnown RBP16.21■□□□□ 0.19
KNSTRN-211ENST00000560673 LDHDQ86WU2 507 aa16.21■□□□□ 0.19
KNSTRN-211ENST00000560673 WDR33Q9C0J8 1336 aaKnown RBP16.2■□□□□ 0.18
KNSTRN-211ENST00000560673 RPS6KA4O75676 772 aa16.2■□□□□ 0.18
KNSTRN-211ENST00000560673 DDR1Q08345 913 aa16.2■□□□□ 0.18
KNSTRN-211ENST00000560673 COG3Q96JB2 828 aa16.2■□□□□ 0.18
KNSTRN-211ENST00000560673 RTL1A6NKG5 1358 aa16.2■□□□□ 0.18
KNSTRN-211ENST00000560673 FBLN1P23142 703 aa16.19■□□□□ 0.18
KNSTRN-211ENST00000560673 ERFEQ4G0M1 354 aa16.19■□□□□ 0.18
KNSTRN-211ENST00000560673 TERF2IPQ9NYB0 399 aa16.19■□□□□ 0.18
KNSTRN-211ENST00000560673 NFKBIEO00221 500 aa16.18■□□□□ 0.18
KNSTRN-211ENST00000560673 FKBP8Q14318 412 aa16.18■□□□□ 0.18
KNSTRN-211ENST00000560673 PRPF38BQ5VTL8 546 aaKnown RBP16.18■□□□□ 0.18
KNSTRN-211ENST00000560673 TTLL6Q8N841 843 aa16.18■□□□□ 0.18
KNSTRN-211ENST00000560673 PCGF6Q9BYE7 350 aa16.18■□□□□ 0.18
KNSTRN-211ENST00000560673 MCOLN1Q9GZU1 580 aa16.18■□□□□ 0.18
KNSTRN-211ENST00000560673 ATG3Q9NT62 314 aa16.18■□□□□ 0.18
KNSTRN-211ENST00000560673 CCDC88AQ3V6T2 1871 aa16.18■□□□□ 0.18
KNSTRN-211ENST00000560673 CNTNAP4Q9C0A0 1308 aa16.18■□□□□ 0.18
KNSTRN-211ENST00000560673 IQCA1LA6NCM1 817 aa16.17■□□□□ 0.18
KNSTRN-211ENST00000560673 TRIM26Q12899 539 aaPredicted RBP16.17■□□□□ 0.18
KNSTRN-211ENST00000560673 SLC12A5Q9H2X9 1139 aa16.17■□□□□ 0.18
KNSTRN-211ENST00000560673 ITGBL1O95965 494 aaPredicted RBP16.16■□□□□ 0.18
KNSTRN-211ENST00000560673 A0A1W2PP64 1363 aa16.15■□□□□ 0.18
KNSTRN-211ENST00000560673 KDRP35968 1356 aa16.15■□□□□ 0.18
KNSTRN-211ENST00000560673 POLRMTO00411 1230 aaKnown RBP16.15■□□□□ 0.18
KNSTRN-211ENST00000560673 DDNO94850 711 aaPredicted RBP16.15■□□□□ 0.18
KNSTRN-211ENST00000560673 RBM42Q9BTD8 480 aaKnown RBP16.15■□□□□ 0.18
KNSTRN-211ENST00000560673 SRP68Q9UHB9 627 aaKnown RBP16.15■□□□□ 0.18
KNSTRN-211ENST00000560673 SPG7Q9UQ90 795 aa16.15■□□□□ 0.18
KNSTRN-211ENST00000560673 RRS1Q15050 365 aaKnown RBP16.14■□□□□ 0.17
KNSTRN-211ENST00000560673 SLC4A9Q96Q91 983 aa16.14■□□□□ 0.17
KNSTRN-211ENST00000560673 ABT1Q9ULW3 272 aaKnown RBP16.14■□□□□ 0.17
KNSTRN-211ENST00000560673 USP42Q9H9J4 1324 aaKnown RBP16.14■□□□□ 0.17
KNSTRN-211ENST00000560673 TAF1DQ9H5J8 278 aaPredicted RBP16.12■□□□□ 0.17
KNSTRN-211ENST00000560673 TM4SF1P30408 202 aa16.11■□□□□ 0.17
KNSTRN-211ENST00000560673 EAPPQ56P03 285 aaPredicted RBP16.11■□□□□ 0.17
KNSTRN-211ENST00000560673 TSKSQ9UJT2 592 aa16.11■□□□□ 0.17
KNSTRN-211ENST00000560673 CLEC11AQ9Y240 323 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms